RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 INO80CQ6PI98 192 aaPredicted RBP10.47□□□□□ -0.73
VPS52-218ENST00000482399 OR1B1Q8NGR6 318 aa10.47□□□□□ -0.73
VPS52-218ENST00000482399 Q8TCH9 128 aa10.47□□□□□ -0.73
VPS52-218ENST00000482399 FAM168AQ92567 244 aa10.47□□□□□ -0.73
VPS52-218ENST00000482399 HARBI1Q96MB7 349 aa10.47□□□□□ -0.73
VPS52-218ENST00000482399 TP73-AS1Q9UF72 201 aa10.47□□□□□ -0.73
VPS52-218ENST00000482399 AMMECR1Q9Y4X0 333 aaPredicted RBP10.47□□□□□ -0.73
VPS52-218ENST00000482399 CEP192Q8TEP8 1941 aa10.47□□□□□ -0.73
VPS52-218ENST00000482399 A0A1W2PN81 502 aa10.47□□□□□ -0.73
VPS52-218ENST00000482399 NKX2-8O15522 239 aa10.47□□□□□ -0.73
VPS52-218ENST00000482399 PROP1O75360 226 aa10.47□□□□□ -0.73
VPS52-218ENST00000482399 FAM216BQ8N7L0 139 aa10.47□□□□□ -0.73
VPS52-218ENST00000482399 BDP1A6H8Y1 2624 aa10.47□□□□□ -0.73
VPS52-218ENST00000482399 A0A1W2PS18 150 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 IGKV1-16P04430 117 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 ERHP84090 104 aaKnown RBP10.46□□□□□ -0.73
VPS52-218ENST00000482399 PEAR1Q5VY43 1037 aaPredicted RBP10.46□□□□□ -0.73
VPS52-218ENST00000482399 NPIPB3Q92617 1050 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 KCNS1Q96KK3 526 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 CDC42EP3Q9UKI2 254 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 SSUH2Q9Y2M2 353 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 DYSFO75923 2080 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 COL4A2P08572 1712 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 MOSP00540 346 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 YPEL3P61236 119 aaPredicted RBP10.46□□□□□ -0.73
VPS52-218ENST00000482399 SSX8Q7RTT4 187 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 TCF24Q7RTU0 167 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 C1orf174Q8IYL3 243 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 OR10X1Q8NGY0 326 aa10.46□□□□□ -0.73
VPS52-218ENST00000482399 AMY1AP04745 511 aa10.46□□□□□ -0.74
VPS52-218ENST00000482399 SRSF6Q13247 344 aaKnown RBP10.46□□□□□ -0.74
VPS52-218ENST00000482399 TNXAQ16473 311 aa10.46□□□□□ -0.74
VPS52-218ENST00000482399 C1orf210Q8IVY1 113 aa10.46□□□□□ -0.74
VPS52-218ENST00000482399 ZNF596Q8TC21 504 aa10.46□□□□□ -0.74
VPS52-218ENST00000482399 FLYWCH2Q96CP2 140 aaKnown RBP10.46□□□□□ -0.74
VPS52-218ENST00000482399 TXNDC17Q9BRA2 123 aa10.46□□□□□ -0.74
VPS52-218ENST00000482399 PROCRQ9UNN8 238 aa10.46□□□□□ -0.74
VPS52-218ENST00000482399 MRPS18CQ9Y3D5 142 aaKnown RBP10.46□□□□□ -0.74
VPS52-218ENST00000482399 ZFHX4Q86UP3 3567 aa10.46□□□□□ -0.74
VPS52-218ENST00000482399 IGKV1D-17A0A075B6S4 117 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 CHEK1O14757 476 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 HLA-DQA1P01909 254 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 LEMD1Q68G75 181 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 V9GYV3 84 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 HYPMO75409 117 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 C8orf88P0DMB2 117 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 SLAQ13239 276 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 SPRNQ5BIV9 151 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 CT45A1Q5HYN5 189 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 CT45A3Q8NHU0 189 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 PGLYRP4Q96LB8 373 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 ASCL2Q99929 193 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 C20orf144Q9BQM9 153 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 PAXXQ9BUH6 204 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 CLEC7AQ9BXN2 247 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 COL5A1P20908 1838 aaPredicted RBP10.45□□□□□ -0.74
VPS52-218ENST00000482399 C15orf61A6NNL5 157 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 GGTLC3B5MD39 225 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 BMPR1BO00238 502 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 MT-ND6P03923 174 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 Q6ZT83 130 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 C11orf53Q8IXP5 236 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 C9orf106Q8NAJ2 232 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 RAB1CQ92928 201 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 CDX2Q99626 313 aaPredicted RBP10.45□□□□□ -0.74
VPS52-218ENST00000482399 JPT1Q9UK76 154 aa10.45□□□□□ -0.74
VPS52-218ENST00000482399 VDAC2P45880 294 aaPredicted RBP10.44□□□□□ -0.74
VPS52-218ENST00000482399 ZNF138P52744 262 aa10.44□□□□□ -0.74
VPS52-218ENST00000482399 KLF3P57682 345 aaPredicted RBP10.44□□□□□ -0.74
VPS52-218ENST00000482399 RELQ04864 619 aaPredicted RBP10.44□□□□□ -0.74
VPS52-218ENST00000482399 HES4Q9HCC6 221 aa10.44□□□□□ -0.74
VPS52-218ENST00000482399 KIAA1549Q9HCM3 1950 aa10.44□□□□□ -0.74
VPS52-218ENST00000482399 PGPA6NDG6 321 aa10.44□□□□□ -0.74
VPS52-218ENST00000482399 HIGD1CA8MV81 97 aa10.44□□□□□ -0.74
VPS52-218ENST00000482399 TEX43Q6ZNM6 134 aa10.44□□□□□ -0.74
VPS52-218ENST00000482399 ZPBPQ9BS86 351 aa10.44□□□□□ -0.74
VPS52-218ENST00000482399 GP6Q9HCN6 339 aa10.44□□□□□ -0.74
VPS52-218ENST00000482399 MALRD1Q5VYJ5 2156 aa10.44□□□□□ -0.74
VPS52-218ENST00000482399 KMT2EQ8IZD2 1858 aa10.44□□□□□ -0.74
VPS52-218ENST00000482399 A0A1B0GWJ7 208 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 TNFAIP6P98066 277 aaPredicted RBP10.43□□□□□ -0.74
VPS52-218ENST00000482399 MZT1Q08AG7 82 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 C10orf113Q5VZT2 155 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 ZNF738Q8NE65 137 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 TSKUQ8WUA8 353 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 GNB1LQ9BYB4 327 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 IFI27L2Q9H2X8 130 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 MGAQ8IWI9 3026 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 LNP1A1A4G5 178 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 LINC00310P59036 64 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 BPIFB3P59826 476 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 CX3CL1P78423 397 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 GCSAMQ8N6F7 178 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 KIR3DL3Q8N743 410 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 CCL17Q92583 94 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 PRNDQ9UKY0 176 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 COL6A6A6NMZ7 2263 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 IGHV2OR16-5A0A0B4J2B6 119 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 CORTO00230 105 aa10.43□□□□□ -0.74
VPS52-218ENST00000482399 MORN5Q5VZ52 161 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms