RNA–Protein interactions for RNA: ENST00000479511.1

GAPVD1-217, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 575 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-217ENST00000479511 TRAPPC13A5PLN9 417 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 CLDN24A6NM45 220 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 TCF21O43680 179 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 OR2B3O76000 313 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 STATHP02808 62 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 IFNA16P05015 189 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 PIPP12273 146 aaPredicted RBP4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 MYL12AP19105 171 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 GABRA3P34903 492 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 SLC35A2P78381 396 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 EMX1Q04741 257 aaPredicted RBP4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 ATP5G2Q06055 141 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 TSPAN31Q12999 210 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 CLEC12BQ2HXU8 276 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 SP6Q3SY56 376 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 OLIG3Q7RTU3 272 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 OR2M3Q8NG83 312 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 OR11L1Q8NGX0 322 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 HAVCR2Q8TDQ0 301 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 S100ZQ8WXG8 99 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 C12orf43Q96C57 262 aaKnown RBP4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 SDF2Q99470 211 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 AICDAQ9GZX7 198 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 PRTFDC1Q9NRG1 225 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 ZNF443Q9Y2A4 671 aaPredicted RBP4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 DSPPQ9NZW4 1301 aa4.64□□□□□ -1.67
GAPVD1-217ENST00000479511 TMEM210A6NLX4 147 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 SSNA1O43805 119 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 LINC00869P0C866 280 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 CBX5P45973 191 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 KRTAP10-7P60409 375 aaPredicted RBP4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 MOGQ16653 247 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 SAPCD1Q5SSQ6 148 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 XAF1Q6GPH4 301 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 IGFL2Q6UWQ7 119 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 RASSF6Q6ZTQ3 369 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 CLDN22Q8N7P3 220 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 GPR32P1Q8NGA4 272 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 OR52L1Q8NGH7 329 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 OR5H2Q8NGV7 314 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 ZNF285Q96NJ3 590 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 NIPSNAP1Q9BPW8 284 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 DHRS9Q9BPW9 319 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 MND1Q9BWT6 205 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 TMEM38BQ9NVV0 291 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 TVP23BQ9NYZ1 205 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 BAIAP2Q9UQB8 552 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 SLC35A3Q9Y2D2 325 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 MED31Q9Y3C7 131 aa4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 YTHDF2Q9Y5A9 579 aaKnown RBP4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 NIPBLQ6KC79 2804 aaeCLIP4.63□□□□□ -1.67
GAPVD1-217ENST00000479511 APCP25054 2843 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 CENPVL3A0A0U1RRI6 287 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 ZNF860A6NHJ4 632 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 CPSF4LA6NMK7 179 aaKnown RBP4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 A8MWL6 223 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 C4orf51C9J302 202 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 C9JQL5 133 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 IFNGP01579 166 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 C1QCP02747 245 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 SCGB1C2P0DMR2 95 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 SPTBP11277 2137 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 CD36P16671 472 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 PSMA1P25786 263 aaKnown RBP4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 S100A5P33763 92 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 KRR1Q13601 381 aaKnown RBP4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 KLHL12Q53G59 568 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 TRMT12Q53H54 448 aaKnown RBP4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 FAM222AQ5U5X8 452 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 C12orf73Q69YU5 71 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 ELP2Q6IA86 826 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 GID4Q8IVV7 300 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 OR52R1Q8NGF1 315 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 OR4C13Q8NGP0 309 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 SCGB1C1Q8TD33 95 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 CT55Q8WUE5 264 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 BORCS5Q969J3 196 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 ZHX1-C8orf76Q96EF9 292 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 GPR82Q96P67 336 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 RNF5Q99942 180 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 MAP1LC3AQ9H492 121 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 UBQLN4Q9NRR5 601 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 IL20Q9NYY1 176 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 ATRQ13535 2644 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 CSPG4Q6UVK1 2322 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 CNTRLQ7Z7A1 2325 aa4.62□□□□□ -1.67
GAPVD1-217ENST00000479511 A0A087WUU8 490 aa4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 IGHV1-3A0A0C4DH29 117 aa4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 PNMA8CA0A1B0GUJ8 204 aa4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 A0A1B0GX78 115 aa4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 RIIAD1A6NNX1 92 aa4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 CHP2O43745 196 aa4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 KCNK2O95069 426 aa4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 RPS4Y1P22090 263 aaKnown RBP4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 FUT5Q11128 374 aa4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 SKP2Q13309 424 aa4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 ZNF846Q147U1 533 aa4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 ZNF141Q15928 474 aa4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 MRPL2Q5T653 305 aaKnown RBP4.61□□□□□ -1.67
GAPVD1-217ENST00000479511 SPATA31B1PQ5VZV4 182 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms