RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 Q6ZR54 194 aa11.58□□□□□ -0.56
DDX56-210ENST00000479440 Q6ZRM9 215 aa11.58□□□□□ -0.56
DDX56-210ENST00000479440 TPRA1Q86W33 373 aa11.58□□□□□ -0.56
DDX56-210ENST00000479440 MAPKAPK5-AS1Q8N8E1 139 aa11.58□□□□□ -0.56
DDX56-210ENST00000479440 TSC22D3Q99576 134 aa11.58□□□□□ -0.56
DDX56-210ENST00000479440 NSG2Q9Y328 171 aa11.58□□□□□ -0.56
DDX56-210ENST00000479440 IGHV3-66A0A0C4DH42 116 aa11.57□□□□□ -0.56
DDX56-210ENST00000479440 MT-CO2P00403 227 aa11.57□□□□□ -0.56
DDX56-210ENST00000479440 TOMM20LQ6UXN7 152 aa11.57□□□□□ -0.56
DDX56-210ENST00000479440 ZNF600Q6ZNG1 722 aa11.57□□□□□ -0.56
DDX56-210ENST00000479440 CADM3Q8N126 398 aa11.57□□□□□ -0.56
DDX56-210ENST00000479440 STXBP6Q8NFX7 210 aa11.57□□□□□ -0.56
DDX56-210ENST00000479440 TSPAN14Q8NG11 270 aa11.57□□□□□ -0.56
DDX56-210ENST00000479440 CLEC5AQ9NY25 188 aa11.57□□□□□ -0.56
DDX56-210ENST00000479440 A0A1W2PS18 150 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 C16orf90A8MZG2 172 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 K7EQG2 157 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 APOHP02749 345 aaPredicted RBP11.56□□□□□ -0.56
DDX56-210ENST00000479440 RLN1P04808 185 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 ZNF688P0C7X2 276 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 PTHLHP12272 177 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 F2RP25116 425 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 HERV-K104P61576 105 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 C1orf134Q5TEV5 83 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 ZNF367Q7RTV3 350 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 PRSS48Q7RTY5 328 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 HOGA1Q86XE5 327 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 ZNF114Q8NC26 417 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 PINX1Q96BK5 328 aaKnown RBP11.56□□□□□ -0.56
DDX56-210ENST00000479440 FAM210BQ96KR6 192 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 DUSP21Q9H596 190 aa11.56□□□□□ -0.56
DDX56-210ENST00000479440 PUS1Q9Y606 427 aaKnown RBP eCLIP11.56□□□□□ -0.56
DDX56-210ENST00000479440 KNCNA6PVL3 124 aa11.55□□□□□ -0.56
DDX56-210ENST00000479440 NOTOA8MTQ0 251 aa11.55□□□□□ -0.56
DDX56-210ENST00000479440 KRASP01116 189 aa11.55□□□□□ -0.56
DDX56-210ENST00000479440 G6PCP35575 357 aa11.55□□□□□ -0.56
DDX56-210ENST00000479440 NPBWR1P48145 328 aa11.55□□□□□ -0.56
DDX56-210ENST00000479440 TBCEQ15813 527 aaPredicted RBP11.55□□□□□ -0.56
DDX56-210ENST00000479440 KCTD21Q4G0X4 260 aa11.55□□□□□ -0.56
DDX56-210ENST00000479440 ACTL10Q5JWF8 245 aa11.55□□□□□ -0.56
DDX56-210ENST00000479440 LILRB2Q8N423 598 aa11.55□□□□□ -0.56
DDX56-210ENST00000479440 CSNK1G2-AS1Q8NCQ2 148 aa11.55□□□□□ -0.56
DDX56-210ENST00000479440 C1QTNF4Q9BXJ3 329 aa11.55□□□□□ -0.56
DDX56-210ENST00000479440 ZFAND3Q9H8U3 227 aa11.55□□□□□ -0.56
DDX56-210ENST00000479440 NDUFB11Q9NX14 153 aa11.55□□□□□ -0.56
DDX56-210ENST00000479440 TRDV1A0A1B0GX56 115 aa11.54□□□□□ -0.56
DDX56-210ENST00000479440 SMIM30A4D0T7 59 aa11.54□□□□□ -0.56
DDX56-210ENST00000479440 NUTF2P61970 127 aaKnown RBP11.54□□□□□ -0.56
DDX56-210ENST00000479440 C22orf42Q6IC83 251 aa11.54□□□□□ -0.56
DDX56-210ENST00000479440 LGALS14Q8TCE9 139 aa11.54□□□□□ -0.56
DDX56-210ENST00000479440 MOB3AQ96BX8 217 aa11.54□□□□□ -0.56
DDX56-210ENST00000479440 NARS2Q96I59 477 aaKnown RBP11.54□□□□□ -0.56
DDX56-210ENST00000479440 SCRT1Q9BWW7 348 aa11.54□□□□□ -0.56
DDX56-210ENST00000479440 RHBDL2Q9NX52 303 aa11.54□□□□□ -0.56
DDX56-210ENST00000479440 IGHV3-48P01763 117 aa11.53□□□□□ -0.56
DDX56-210ENST00000479440 NPPCP23582 126 aa11.53□□□□□ -0.56
DDX56-210ENST00000479440 GNRHRP30968 328 aa11.53□□□□□ -0.56
DDX56-210ENST00000479440 FGF9P31371 208 aaPredicted RBP11.53□□□□□ -0.56
DDX56-210ENST00000479440 LPAR6P43657 344 aa11.53□□□□□ -0.56
DDX56-210ENST00000479440 RNF212Q495C1 297 aa11.53□□□□□ -0.56
DDX56-210ENST00000479440 FCAMRQ8WWV6 532 aa11.53□□□□□ -0.56
DDX56-210ENST00000479440 METTL26Q96S19 204 aa11.53□□□□□ -0.56
DDX56-210ENST00000479440 DAPK2Q9UIK4 370 aa11.53□□□□□ -0.56
DDX56-210ENST00000479440 TEX48A0A1B0GUV7 120 aa11.52□□□□□ -0.57
DDX56-210ENST00000479440 TMEM189A5PLL7 270 aa11.52□□□□□ -0.57
DDX56-210ENST00000479440 SCGB2A1O75556 95 aa11.52□□□□□ -0.57
DDX56-210ENST00000479440 SPART-AS1P0CW21 52 aa11.52□□□□□ -0.57
DDX56-210ENST00000479440 P2RY1P47900 373 aa11.52□□□□□ -0.57
DDX56-210ENST00000479440 EIF2B2P49770 351 aaKnown RBP11.52□□□□□ -0.57
DDX56-210ENST00000479440 PRCDQ00LT1 54 aa11.52□□□□□ -0.57
DDX56-210ENST00000479440 CMTM1Q8IZ96 169 aa11.52□□□□□ -0.57
DDX56-210ENST00000479440 OR5AP2Q8NGF4 316 aa11.52□□□□□ -0.57
DDX56-210ENST00000479440 DBX1A6NMT0 343 aa11.51□□□□□ -0.57
DDX56-210ENST00000479440 PGLYRP1O75594 196 aaPredicted RBP11.51□□□□□ -0.57
DDX56-210ENST00000479440 CBX5P45973 191 aa11.51□□□□□ -0.57
DDX56-210ENST00000479440 ERHP84090 104 aaKnown RBP11.51□□□□□ -0.57
DDX56-210ENST00000479440 DCANP1Q8TF63 244 aa11.51□□□□□ -0.57
DDX56-210ENST00000479440 TRAV18A0A075B6X5 111 aa11.5□□□□□ -0.57
DDX56-210ENST00000479440 PSMG4Q5JS54 123 aa11.5□□□□□ -0.57
DDX56-210ENST00000479440 SFXN4Q6P4A7 337 aa11.5□□□□□ -0.57
DDX56-210ENST00000479440 Q8N1X5 172 aa11.5□□□□□ -0.57
DDX56-210ENST00000479440 OR4A16Q8NH70 328 aa11.5□□□□□ -0.57
DDX56-210ENST00000479440 RNF167Q9H6Y7 350 aa11.5□□□□□ -0.57
DDX56-210ENST00000479440 EHFQ9NZC4 300 aa11.5□□□□□ -0.57
DDX56-210ENST00000479440 A0A0A6YYH2 397 aa11.49□□□□□ -0.57
DDX56-210ENST00000479440 A0A1B0GU03 582 aa11.49□□□□□ -0.57
DDX56-210ENST00000479440 HELTA6NFD8 242 aa11.49□□□□□ -0.57
DDX56-210ENST00000479440 A6NJ64 397 aa11.49□□□□□ -0.57
DDX56-210ENST00000479440 FCER2P06734 321 aa11.49□□□□□ -0.57
DDX56-210ENST00000479440 CRYBB3P26998 211 aa11.49□□□□□ -0.57
DDX56-210ENST00000479440 SCAND1P57086 179 aa11.49□□□□□ -0.57
DDX56-210ENST00000479440 RAB40CQ96S21 281 aa11.49□□□□□ -0.57
DDX56-210ENST00000479440 NEU1Q99519 415 aa11.49□□□□□ -0.57
DDX56-210ENST00000479440 ZNF2Q9BSG1 426 aaPredicted RBP11.49□□□□□ -0.57
DDX56-210ENST00000479440 IFT46Q9NQC8 304 aa11.49□□□□□ -0.57
DDX56-210ENST00000479440 XCL2Q9UBD3 114 aa11.49□□□□□ -0.57
DDX56-210ENST00000479440 RRP15Q9Y3B9 282 aaKnown RBP11.49□□□□□ -0.57
DDX56-210ENST00000479440 CORTO00230 105 aa11.48□□□□□ -0.57
DDX56-210ENST00000479440 GPR31O00270 319 aa11.48□□□□□ -0.57
DDX56-210ENST00000479440 FAM3BP58499 235 aaPredicted RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms