RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 ZXDAP98168 799 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 CFHR5Q9BXR6 569 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 SPANXB1Q9NS25 103 aaPredicted RBP11.36□□□□□ -0.59
HDAC1-206ENST00000476391 SIGLEC8Q9NYZ4 499 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 R4GN57 208 aa11.36□□□□□ -0.59
HDAC1-206ENST00000476391 OR11H12B2RN74 326 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 H0Y8G0 127 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 TAS2R45P59539 299 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 ANKRD37Q7Z713 158 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 OR11H1Q8NG94 326 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 OR11H2Q8NH07 326 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 ZNF503Q96F45 646 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 C2CD4DB7Z1M9 353 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.35□□□□□ -0.59
HDAC1-206ENST00000476391 SMAD7O15105 426 aaKnown RBP11.35□□□□□ -0.59
HDAC1-206ENST00000476391 IGHV3-7P01780 117 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 TRAT1Q6PIZ9 186 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 DHRS13Q6UX07 377 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 GALMQ96C23 342 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 PKIBQ9C010 78 aa11.35□□□□□ -0.59
HDAC1-206ENST00000476391 VWC2LB2RUY7 222 aa11.34□□□□□ -0.59
HDAC1-206ENST00000476391 ACTL6BO94805 426 aa11.34□□□□□ -0.59
HDAC1-206ENST00000476391 SMIM13P0DJ93 91 aa11.34□□□□□ -0.59
HDAC1-206ENST00000476391 TFF2Q03403 129 aa11.34□□□□□ -0.59
HDAC1-206ENST00000476391 C1orf53Q5VUE5 145 aa11.34□□□□□ -0.59
HDAC1-206ENST00000476391 HSD17B10Q99714 261 aaKnown RBP11.34□□□□□ -0.59
HDAC1-206ENST00000476391 C5orf42Q9H799 3197 aa11.34□□□□□ -0.59
HDAC1-206ENST00000476391 KNL1Q8NG31 2342 aa11.34□□□□□ -0.59
HDAC1-206ENST00000476391 ARL4DP49703 201 aa11.34□□□□□ -0.59
HDAC1-206ENST00000476391 NEU4Q8WWR8 484 aaPredicted RBP11.34□□□□□ -0.59
HDAC1-206ENST00000476391 ZNF747Q9BV97 191 aa11.34□□□□□ -0.59
HDAC1-206ENST00000476391 C19orf24Q9BVV8 132 aa11.34□□□□□ -0.59
HDAC1-206ENST00000476391 FNDC10F2Z333 226 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 GNG3P63215 75 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 Q6ZR03 302 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 GCSAMQ8N6F7 178 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 NANOS1Q8WY41 292 aaKnown RBP11.33□□□□□ -0.6
HDAC1-206ENST00000476391 SPACA9Q96E40 222 aaPredicted RBP11.33□□□□□ -0.6
HDAC1-206ENST00000476391 ABHD17AQ96GS6 310 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 NABP2Q9BQ15 211 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 FGF21Q9NSA1 209 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 PGPEP1Q9NXJ5 209 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 CNTRLQ7Z7A1 2325 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 C19orf67A6NJJ6 358 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 DNPH1O43598 174 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 KLF7O75840 302 aaPredicted RBP11.33□□□□□ -0.6
HDAC1-206ENST00000476391 ZFAND5O76080 213 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 OR2H2O95918 312 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 CCNOP22674 350 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 TMEM164Q5U3C3 297 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 PLA2G2FQ9BZM2 168 aa11.33□□□□□ -0.6
HDAC1-206ENST00000476391 LOC102723996A0A087X1L8 192 aa11.32□□□□□ -0.6
HDAC1-206ENST00000476391 TRGV8A0A0C4DH27 118 aa11.32□□□□□ -0.6
HDAC1-206ENST00000476391 TEX50A0A1B0GTY4 177 aa11.32□□□□□ -0.6
HDAC1-206ENST00000476391 ABHD12Q8N2K0 398 aa11.32□□□□□ -0.6
HDAC1-206ENST00000476391 BADQ92934 168 aa11.32□□□□□ -0.6
HDAC1-206ENST00000476391 ZNF479Q96JC4 524 aa11.32□□□□□ -0.6
HDAC1-206ENST00000476391 SPAG8Q99932 426 aaPredicted RBP11.32□□□□□ -0.6
HDAC1-206ENST00000476391 EML6Q6ZMW3 1958 aa11.32□□□□□ -0.6
HDAC1-206ENST00000476391 LINC00473A8K010 186 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 KLRC4-KLRK1H3BQV0 150 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 COL8A2P25067 703 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 DUTP33316 252 aaKnown RBP11.31□□□□□ -0.6
HDAC1-206ENST00000476391 PRAMEF5Q5TYX0 476 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 PRAMEF6Q5VXH4 476 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 OR10D3Q8NH80 312 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 ZNF418Q8TF45 676 aaPredicted RBP11.31□□□□□ -0.6
HDAC1-206ENST00000476391 GTSF1Q8WW33 167 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 MPC1Q9Y5U8 109 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 HCFC1P51610 2035 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 CT45A6P0DMU7 189 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 CT45A5P0DMU8 189 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 CT45A7P0DMV0 189 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 FCGR2BP31994 310 aaPredicted RBP11.31□□□□□ -0.6
HDAC1-206ENST00000476391 CSN1S1P47710 185 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 GPR12P47775 334 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 RAC3P60763 192 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 CT45A1Q5HYN5 189 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 AAED1Q7RTV5 226 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 CT45A3Q8NHU0 189 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 RPP25Q9BUL9 199 aaKnown RBP11.31□□□□□ -0.6
HDAC1-206ENST00000476391 C7orf69Q9H7B7 122 aa11.31□□□□□ -0.6
HDAC1-206ENST00000476391 AMMECR1Q9Y4X0 333 aaPredicted RBP11.31□□□□□ -0.6
HDAC1-206ENST00000476391 MKI67P46013 3256 aaKnown RBP11.31□□□□□ -0.6
HDAC1-206ENST00000476391 A0A0J9YW62 118 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 DKK1O94907 266 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 NRN1LQ496H8 165 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 CT83Q5H943 113 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 ZADH2Q8N4Q0 377 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 SRXN1Q9BYN0 137 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 SSUH2Q9Y2M2 353 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 J3QT63 122 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 ASPHD1Q5U4P2 390 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 Q8IYB0 196 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 TMUB1Q9BVT8 246 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 JPT1Q9UK76 154 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 INSIG2Q9Y5U4 225 aa11.3□□□□□ -0.6
HDAC1-206ENST00000476391 CHCHD2Q9Y6H1 151 aaPredicted RBP11.3□□□□□ -0.6
HDAC1-206ENST00000476391 IGLV3-12A0A075B6K2 115 aa11.29□□□□□ -0.6
HDAC1-206ENST00000476391 A8MWL6 223 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms