RNA–Protein interactions for RNA: ENST00000475214.5

PCCB-213, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 2

Gene PCCB, Length 1,295 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-213ENST00000475214 ARSJQ5FYB0 599 aaPredicted RBP8.15□□□□□ -1.1
PCCB-213ENST00000475214 FFAR4Q5NUL3 377 aa8.15□□□□□ -1.1
PCCB-213ENST00000475214 ETFRF1Q6IPR1 90 aa8.15□□□□□ -1.1
PCCB-213ENST00000475214 Q8N6K4 173 aa8.15□□□□□ -1.1
PCCB-213ENST00000475214 LINC01356Q8N9X3 169 aa8.15□□□□□ -1.1
PCCB-213ENST00000475214 ZNF114Q8NC26 417 aa8.15□□□□□ -1.1
PCCB-213ENST00000475214 ABHD5Q8WTS1 349 aa8.15□□□□□ -1.1
PCCB-213ENST00000475214 SFT2D1Q8WV19 159 aa8.15□□□□□ -1.1
PCCB-213ENST00000475214 C17orf50Q8WW18 174 aa8.15□□□□□ -1.1
PCCB-213ENST00000475214 SRSF12Q8WXF0 261 aaKnown RBP8.15□□□□□ -1.1
PCCB-213ENST00000475214 NARS2Q96I59 477 aaKnown RBP8.15□□□□□ -1.1
PCCB-213ENST00000475214 SLC35E1Q96K37 410 aa8.15□□□□□ -1.1
PCCB-213ENST00000475214 P2RX4Q99571 388 aa8.15□□□□□ -1.1
PCCB-213ENST00000475214 C7orf69Q9H7B7 122 aa8.15□□□□□ -1.1
PCCB-213ENST00000475214 TRAV1-1A0A0B4J248 108 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 TRAV40A0A0B4J280 105 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 A0A1B0GW64 132 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 CORTO00230 105 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 REG1AP05451 166 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 M6PRP20645 277 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 LOXL1Q08397 574 aaPredicted RBP8.14□□□□□ -1.11
PCCB-213ENST00000475214 FXYD3Q14802 87 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 ACSM6Q6P461 480 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 TMEM144Q7Z5S9 345 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 BPIFCQ8NFQ6 507 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 OR10G4Q8NGN3 311 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 OR10G9Q8NGN4 311 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 OR10G7Q8NGN6 311 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 SSMEM1Q8WWF3 244 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 MBD3L1Q8WWY6 194 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 AJUBAQ96IF1 538 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 LINC00052Q96N35 136 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 MGST2Q99735 147 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 ACTR3CQ9C0K3 210 aaPredicted RBP8.14□□□□□ -1.11
PCCB-213ENST00000475214 VSIRQ9H7M9 311 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 SLC39A9Q9NUM3 307 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 HIF1ANQ9NWT6 349 aa8.14□□□□□ -1.11
PCCB-213ENST00000475214 LSM4Q9Y4Z0 139 aaKnown RBP8.14□□□□□ -1.11
PCCB-213ENST00000475214 FLNAP21333 2647 aaKnown RBP8.14□□□□□ -1.11
PCCB-213ENST00000475214 ABCA2Q9BZC7 2435 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 TNCP24821 2201 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 IGHV3OR16-10A0A075B7F0 116 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 A0A096LNT2 108 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 CTXND1A0A1B0GTU2 59 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 A0A1B0GV50 99 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 TEX22C9J3V5 150 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 J3QLI3 93 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 SMAD7O15105 426 aaKnown RBP8.13□□□□□ -1.11
PCCB-213ENST00000475214 LY6G6DO95868 133 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 RPL29P47914 159 aaKnown RBP8.13□□□□□ -1.11
PCCB-213ENST00000475214 GAMTQ14353 236 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 GUK1Q16774 197 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 FAM120AOSQ5T036 256 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 RUSC1-AS1Q66K80 236 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 SPSB3Q6PJ21 355 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 ZNF562Q6V9R5 426 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 SLC16A13Q7RTY0 426 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 OR1L6Q8NGR2 347 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 OR1P1Q8NH06 330 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 RCC1LQ96I51 464 aaKnown RBP8.13□□□□□ -1.11
PCCB-213ENST00000475214 RASL11BQ9BPW5 248 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 GGTLC1Q9BX51 225 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 EIF5A2Q9GZV4 153 aaKnown RBP8.13□□□□□ -1.11
PCCB-213ENST00000475214 FAM96BQ9Y3D0 163 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 PXMP4Q9Y6I8 212 aa8.13□□□□□ -1.11
PCCB-213ENST00000475214 ACANP16112 2415 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 A0A1W2PPV4 95 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 TMEM218A2RU14 115 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 MAP1LC3B2A6NCE7 125 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 AREGP15514 252 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 SRSF3P84103 164 aaKnown RBP8.12□□□□□ -1.11
PCCB-213ENST00000475214 MLANAQ16655 118 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 MIC13Q5XKP0 118 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 PVRIGQ6DKI7 326 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 FAM122CQ6P4D5 195 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 LCN15Q6UWW0 184 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 Q71RC1 249 aaPredicted RBP8.12□□□□□ -1.11
PCCB-213ENST00000475214 C22orf15Q8WYQ4 148 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 MISP3Q96FF7 219 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 SMR3AQ99954 134 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 MAP1LC3BQ9GZQ8 125 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 MEGF9Q9H1U4 602 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 SMDT1Q9H4I9 107 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 TMEM231Q9H6L2 316 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 F11RQ9Y624 299 aaKnown RBP8.12□□□□□ -1.11
PCCB-213ENST00000475214 NAV3Q8IVL0 2385 aa8.12□□□□□ -1.11
PCCB-213ENST00000475214 RBFOX3A6NFN3 312 aa8.11□□□□□ -1.11
PCCB-213ENST00000475214 RNF223E7ERA6 249 aa8.11□□□□□ -1.11
PCCB-213ENST00000475214 IFNA1P01562 189 aa8.11□□□□□ -1.11
PCCB-213ENST00000475214 CD5P06127 495 aa8.11□□□□□ -1.11
PCCB-213ENST00000475214 APELAP0DMC3 54 aa8.11□□□□□ -1.11
PCCB-213ENST00000475214 IGHV4-38-2P0DP08 117 aa8.11□□□□□ -1.11
PCCB-213ENST00000475214 DEFA4P12838 97 aa8.11□□□□□ -1.11
PCCB-213ENST00000475214 CDC34P49427 236 aaPredicted RBP8.11□□□□□ -1.11
PCCB-213ENST00000475214 BPIFB3P59826 476 aa8.11□□□□□ -1.11
PCCB-213ENST00000475214 B2MP61769 119 aa8.11□□□□□ -1.11
PCCB-213ENST00000475214 CX3CL1P78423 397 aa8.11□□□□□ -1.11
PCCB-213ENST00000475214 CCL20P78556 96 aa8.11□□□□□ -1.11
PCCB-213ENST00000475214 SSBP2P81877 361 aaPredicted RBP8.11□□□□□ -1.11
PCCB-213ENST00000475214 ZNF726P1Q15940 193 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms