RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 ZNF502Q8TBZ5 544 aa7.99□□□□□ -1.13
CASC3-204ENST00000474190 NMES1Q9C002 83 aa7.99□□□□□ -1.13
CASC3-204ENST00000474190 SLA2Q9H6Q3 261 aa7.99□□□□□ -1.13
CASC3-204ENST00000474190 GSKIPQ9P0R6 139 aa7.99□□□□□ -1.13
CASC3-204ENST00000474190 TSSC4Q9Y5U2 329 aaPredicted RBP7.99□□□□□ -1.13
CASC3-204ENST00000474190 S4R3C0 116 aa7.99□□□□□ -1.13
CASC3-204ENST00000474190 IGHV3-21A0A0B4J1V1 117 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 C5orf51A6NDU8 294 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 FAM223BA6NKX1 122 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 CEBPZOSA8MTT3 80 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 WRBO00258 174 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 SSSCA1O60232 199 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 IGHV3-11P01762 117 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 TPPP2P59282 170 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 DEFB136Q30KP8 78 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 C15orf32Q32M92 178 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 SHISA2Q6UWI4 295 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 TMEM14EPQ6UXP3 125 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 C8orf86Q6ZUL3 223 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 FAM223AQ8IWN6 122 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 SLC24A4Q8NFF2 622 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 SCARB1Q8WTV0 552 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 C4orf3Q8WVX3 66 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 RAX2Q96IS3 184 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 SMIM8Q96KF7 97 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 DUX3Q96PT4 197 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 ZFP57Q9NU63 452 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 OR5AC2Q9NZP5 309 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 FBXL7Q9UJT9 491 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 U3KQ87 197 aa7.98□□□□□ -1.13
CASC3-204ENST00000474190 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.97□□□□□ -1.13
CASC3-204ENST00000474190 A0A1W2PRX2 142 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 DEDDO75618 318 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 TSPAN15O95858 294 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 MT-CO2P00403 227 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 IGHV3-48P01763 117 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 IGHV3-23P01764 117 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 LGALS1P09382 135 aaKnown RBP7.97□□□□□ -1.13
CASC3-204ENST00000474190 LYL1P12980 280 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 NPY1RP25929 384 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 FCGR2BP31994 310 aaPredicted RBP7.97□□□□□ -1.13
CASC3-204ENST00000474190 ADMP35318 185 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 HTR2BP41595 481 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 ERHP84090 104 aaKnown RBP7.97□□□□□ -1.13
CASC3-204ENST00000474190 C3orf56Q8N813 242 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 PPP1R1CQ8WVI7 109 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 BSCL2Q96G97 398 aaPredicted RBP7.97□□□□□ -1.13
CASC3-204ENST00000474190 USMG5Q96IX5 58 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 OR5B12Q96R08 314 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 ZNF436Q9C0F3 470 aaPredicted RBP7.97□□□□□ -1.13
CASC3-204ENST00000474190 MED28Q9H204 178 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 HEYLQ9NQ87 328 aaPredicted RBP7.97□□□□□ -1.13
CASC3-204ENST00000474190 CACFD1Q9UGQ2 172 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 BOLA1Q9Y3E2 137 aa7.97□□□□□ -1.13
CASC3-204ENST00000474190 IGHV4OR15-8A0A075B7B6 117 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 A0A087WW49 117 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 H3BP45 60 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 BMPR1BO00238 502 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 MPC2O95563 127 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 SCGB1D2O95969 90 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 HIST1H1BP16401 226 aaKnown RBP7.96□□□□□ -1.14
CASC3-204ENST00000474190 TAS2R30P59541 319 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 NSUN5P1Q3KNT7 163 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 SLC25A24Q6NUK1 477 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 TMEM65Q6PI78 240 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 VN1R17PQ8TDU5 208 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 CHRDL1Q9BU40 450 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 PDCD10Q9BUL8 212 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 ZNF355PQ9NSJ1 428 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 NOTCH3Q9UM47 2321 aa7.96□□□□□ -1.14
CASC3-204ENST00000474190 IGKV1D-37A0A075B6S9 117 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 IGKV1OR2-108A0A075B7D4 117 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 IGSF23A1L1A6 192 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 FAM24AA6NFZ4 105 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 TSC22D2O75157 780 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 MED6O75586 246 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 CTSGP08311 255 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 GIPP09681 153 aaPredicted RBP7.95□□□□□ -1.14
CASC3-204ENST00000474190 DEFA4P12838 97 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 ATP5G2Q06055 141 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 EXOSC2Q13868 293 aaKnown RBP7.95□□□□□ -1.14
CASC3-204ENST00000474190 PRSS54Q6PEW0 395 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 KLHL30-AS1Q8NEE0 82 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 OR1L6Q8NGR2 347 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 RNASEH2CQ8TDP1 164 aaKnown RBP7.95□□□□□ -1.14
CASC3-204ENST00000474190 MISP3Q96FF7 219 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 ST6GAL2Q96JF0 529 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 RAB40CQ96S21 281 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 HIPK2Q9H2X6 1198 aa7.95□□□□□ -1.14
CASC3-204ENST00000474190 LYRM2Q9NU23 88 aaPredicted RBP7.95□□□□□ -1.14
CASC3-204ENST00000474190 LSM5Q9Y4Y9 91 aaKnown RBP7.95□□□□□ -1.14
CASC3-204ENST00000474190 A0A0G2JLM5 398 aa7.94□□□□□ -1.14
CASC3-204ENST00000474190 PPP5D1E7EU14 171 aa7.94□□□□□ -1.14
CASC3-204ENST00000474190 SMLR1H3BR10 107 aa7.94□□□□□ -1.14
CASC3-204ENST00000474190 IFNA10P01566 189 aa7.94□□□□□ -1.14
CASC3-204ENST00000474190 IGKV1-17P01599 117 aa7.94□□□□□ -1.14
CASC3-204ENST00000474190 CLEC3BP05452 202 aa7.94□□□□□ -1.14
CASC3-204ENST00000474190 SNCAP37840 140 aa7.94□□□□□ -1.14
CASC3-204ENST00000474190 ATP5IP56385 69 aaPredicted RBP7.94□□□□□ -1.14
CASC3-204ENST00000474190 CD69Q07108 199 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms