RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ACACBO00763 2458 aa11.32□□□□□ -0.6
NPHP4-207ENST00000470763 LAMA5O15230 3695 aa11.32□□□□□ -0.6
NPHP4-207ENST00000470763 EPG5Q9HCE0 2579 aa11.32□□□□□ -0.6
NPHP4-207ENST00000470763 WISP2O76076 250 aa11.32□□□□□ -0.6
NPHP4-207ENST00000470763 CD24P25063 80 aa11.32□□□□□ -0.6
NPHP4-207ENST00000470763 ARR3P36575 388 aa11.32□□□□□ -0.6
NPHP4-207ENST00000470763 RIPPLY3P57055 190 aa11.32□□□□□ -0.6
NPHP4-207ENST00000470763 ZNF841Q6ZN19 808 aa11.32□□□□□ -0.6
NPHP4-207ENST00000470763 ZNF503Q96F45 646 aa11.32□□□□□ -0.6
NPHP4-207ENST00000470763 METRNQ9UJH8 293 aa11.32□□□□□ -0.6
NPHP4-207ENST00000470763 ZFHX4Q86UP3 3567 aa11.31□□□□□ -0.6
NPHP4-207ENST00000470763 TMEM70Q9BUB7 260 aa11.31□□□□□ -0.6
NPHP4-207ENST00000470763 C12orf49Q9H741 205 aa11.31□□□□□ -0.6
NPHP4-207ENST00000470763 WDR54Q9H977 334 aa11.31□□□□□ -0.6
NPHP4-207ENST00000470763 TCF19Q9Y242 345 aa11.31□□□□□ -0.6
NPHP4-207ENST00000470763 MYOD1P15172 320 aa11.31□□□□□ -0.6
NPHP4-207ENST00000470763 DUTP33316 252 aaKnown RBP11.31□□□□□ -0.6
NPHP4-207ENST00000470763 GPR12P47775 334 aa11.31□□□□□ -0.6
NPHP4-207ENST00000470763 TMPRSS3P57727 454 aa11.31□□□□□ -0.6
NPHP4-207ENST00000470763 GAGE12BA1L429 117 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 H0Y8G0 127 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 PSG9Q00887 426 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 RPL39P5Q59GN2 51 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 CORO2AQ92828 525 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 LINC00470Q9BZP3 86 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 M0R1X1 148 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 SAP30O75446 220 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 RAB31Q13636 194 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 C3AR1Q16581 482 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 NUDT11Q96G61 164 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 NABP2Q9BQ15 211 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 SAP30LQ9HAJ7 183 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 TMEM140Q9NV12 185 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 TRAV8-6A0A0B4J262 113 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 FOXA3P55318 350 aaPredicted RBP11.3□□□□□ -0.6
NPHP4-207ENST00000470763 ERVK-16P61578 105 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 EDDM3AQ14507 147 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 DEFB125Q8N687 156 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 NUP35Q8NFH5 326 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 IGF2BP2-AS1Q96M15 143 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 MEGF9Q9H1U4 602 aa11.3□□□□□ -0.6
NPHP4-207ENST00000470763 TMEM238C9JI98 176 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 CORTO00230 105 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 CFIP05156 583 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 TRAT1Q6PIZ9 186 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 MDP1Q86V88 176 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 WDR31Q8NA23 367 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 URB1-AS1Q96HZ7 61 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 TMEM167BQ9NRX6 74 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 DMXL2Q8TDJ6 3036 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 IGKV3D-15A0A087WSY6 115 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 A0A087X0K7 114 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 TOX4O94842 621 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 CCL4P13236 92 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 PPOXP50336 477 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 PRR20EP86478 221 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 PRR20CP86479 221 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 PRR20DP86480 221 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 PRR20BP86481 221 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 PRR20AP86496 221 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 SLC35E4Q6ICL7 350 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 SPINK14Q6IE38 97 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 DSPP15924 2871 aaKnown RBP11.29□□□□□ -0.6
NPHP4-207ENST00000470763 CFAP47Q6ZTR5 3102 aa11.29□□□□□ -0.6
NPHP4-207ENST00000470763 Q0VFX4 171 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 SLC25A34Q6PIV7 304 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 SARAFQ96BY9 339 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 RPH3ALQ9UNE2 315 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 TIMM8BQ9Y5J9 83 aaPredicted RBP11.28□□□□□ -0.6
NPHP4-207ENST00000470763 LY6G6EA0A0G2JKS1 128 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 CER1O95813 267 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 SNRNP40Q96DI7 357 aaKnown RBP11.28□□□□□ -0.6
NPHP4-207ENST00000470763 GNG12Q9UBI6 72 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 U3KQA8 63 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 AHCTF1Q8WYP5 2266 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 PCNX2A6NKB5 2137 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 K7ERU9 68 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 SP1P08047 785 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 TRIB1Q96RU8 372 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 PMCHL2Q9BQD1 86 aa11.28□□□□□ -0.6
NPHP4-207ENST00000470763 SNAI2O43623 268 aa11.27□□□□□ -0.6
NPHP4-207ENST00000470763 ST20Q9HBF5 79 aa11.27□□□□□ -0.6
NPHP4-207ENST00000470763 IGKV1OR2-108A0A075B7D4 117 aa11.27□□□□□ -0.61
NPHP4-207ENST00000470763 ZNF766Q5HY98 468 aa11.27□□□□□ -0.61
NPHP4-207ENST00000470763 FAM120AOSQ5T036 256 aa11.27□□□□□ -0.61
NPHP4-207ENST00000470763 OBP2BQ9NPH6 170 aa11.27□□□□□ -0.61
NPHP4-207ENST00000470763 HIGD1CA8MV81 97 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 DYSFO75923 2080 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 FOXE3Q13461 319 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 SGK494Q96LW2 274 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 HES7Q9BYE0 225 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 SLC25A10Q9UBX3 287 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-207ENST00000470763 DUSP13Q9UII6 198 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 LOXL2Q9Y4K0 774 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 ARFGEF3Q5TH69 2177 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 TRAV5A0A0B4J249 113 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 VWC2LB2RUY7 222 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 SYS1-DBNDD2H3BUS1 97 aa11.26□□□□□ -0.61
NPHP4-207ENST00000470763 KLF5Q13887 457 aaPredicted RBP11.26□□□□□ -0.61
NPHP4-207ENST00000470763 MORN5Q5VZ52 161 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms