RNA–Protein interactions for RNA: ENST00000461113.5

HDAC4-207, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 1,019 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-207ENST00000461113 ZNF431Q8TF32 576 aaPredicted RBP9.69□□□□□ -0.86
HDAC4-207ENST00000461113 STAB2Q8WWQ8 2551 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 MCRIP2Q9BUT9 160 aaKnown RBP9.69□□□□□ -0.86
HDAC4-207ENST00000461113 GPR61Q9BZJ8 451 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 PALMDQ9NP74 551 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 PEF1Q9UBV8 284 aaKnown RBP9.69□□□□□ -0.86
HDAC4-207ENST00000461113 F11RQ9Y624 299 aaKnown RBP9.69□□□□□ -0.86
HDAC4-207ENST00000461113 DNAH7Q8WXX0 4024 aa9.69□□□□□ -0.86
HDAC4-207ENST00000461113 TNCP24821 2201 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 TRBV7-1A0A0A6YYK4 115 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 ANKRD34BA5PLL1 514 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 CGB1A6NKQ9 187 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 INMT-MINDY4F8WBC2 141 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 I3L521 148 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 CORTO00230 105 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 WRBO00258 174 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 PRAF2O60831 178 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 IL5P05113 134 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 IFITM3Q01628 133 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 WT1-ASQ06250 92 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 KIAA0141Q14154 515 aaPredicted RBP9.68□□□□□ -0.86
HDAC4-207ENST00000461113 SPINK9Q5DT21 86 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 GGNBP1Q5YKI7 109 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 Q6ZRM9 215 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 C18orf65Q6ZTR6 163 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 NRARPQ7Z6K4 114 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 MITD1Q8WV92 249 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 RAX2Q96IS3 184 aa9.68□□□□□ -0.86
HDAC4-207ENST00000461113 IGLV11-55A0A075B6I3 123 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 FAM90A26D6RGX4 464 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 INS-IGF2F8WCM5 200 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 LY86O95711 162 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 HTR2BP41595 481 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 RPP30P78346 268 aaKnown RBP9.67□□□□□ -0.86
HDAC4-207ENST00000461113 TNFRSF9Q07011 255 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 DEFB136Q30KP8 78 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 AARDQ4LEZ3 155 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 ZNF343Q6P1L6 599 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 C12orf45Q8N5I9 185 aaPredicted RBP9.67□□□□□ -0.86
HDAC4-207ENST00000461113 VN1R17PQ8TDU5 208 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 MISP3Q96FF7 219 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 FANCD2OSQ96PS1 177 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 DUX3Q96PT4 197 aa9.67□□□□□ -0.86
HDAC4-207ENST00000461113 CIB3Q96Q77 187 aaPredicted RBP9.67□□□□□ -0.86
HDAC4-207ENST00000461113 C5orf51A6NDU8 294 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 FAM25EA8MYX2 175 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 SCGB2A1O75556 95 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 NXPH3O95157 252 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 NDUFB8O95169 186 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 PTTG1O95997 202 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 IFNA10P01566 189 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 LYL1P12980 280 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 ATP5IP56385 69 aaPredicted RBP9.66□□□□□ -0.86
HDAC4-207ENST00000461113 RPEL1Q2QD12 228 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 ZNF114Q8NC26 417 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 OR52B4Q8NGK2 314 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 P2RX4Q99571 388 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 ASCL2Q99929 193 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 SEC22CQ9BRL7 303 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 HSPB7Q9UBY9 170 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 U3KQ87 197 aa9.66□□□□□ -0.86
HDAC4-207ENST00000461113 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.65□□□□□ -0.86
HDAC4-207ENST00000461113 RPS10-NUDT3A0A1W2PQS6 291 aa9.65□□□□□ -0.86
HDAC4-207ENST00000461113 SNRPGP15A8MWD9 76 aa9.65□□□□□ -0.86
HDAC4-207ENST00000461113 DEFA5Q01523 94 aa9.65□□□□□ -0.86
HDAC4-207ENST00000461113 IAH1Q2TAA2 248 aaPredicted RBP9.65□□□□□ -0.86
HDAC4-207ENST00000461113 KLK9Q2XQG4 91 aa9.65□□□□□ -0.86
HDAC4-207ENST00000461113 LINC00482Q8N8I6 264 aa9.65□□□□□ -0.86
HDAC4-207ENST00000461113 SLC24A4Q8NFF2 622 aa9.65□□□□□ -0.86
HDAC4-207ENST00000461113 DTD1Q8TEA8 209 aa9.65□□□□□ -0.86
HDAC4-207ENST00000461113 PINX1Q96BK5 328 aaKnown RBP9.65□□□□□ -0.86
HDAC4-207ENST00000461113 MARVELD1Q9BSK0 173 aa9.65□□□□□ -0.86
HDAC4-207ENST00000461113 ELOVL1Q9BW60 279 aa9.65□□□□□ -0.86
HDAC4-207ENST00000461113 RBKSQ9H477 322 aa9.65□□□□□ -0.86
HDAC4-207ENST00000461113 GSKIPQ9P0R6 139 aa9.65□□□□□ -0.86
HDAC4-207ENST00000461113 KLK9Q9UKQ9 250 aa9.65□□□□□ -0.86
HDAC4-207ENST00000461113 IGHV4OR15-8A0A075B7B6 117 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 A0A087WW49 117 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 GGCTO75223 188 aaKnown RBP9.64□□□□□ -0.87
HDAC4-207ENST00000461113 ADAP1O75689 374 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 NPY1RP25929 384 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 NKX2-1P43699 371 aaPredicted RBP9.64□□□□□ -0.87
HDAC4-207ENST00000461113 MFAP4P55083 255 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 RAB11AP62491 216 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 Q56UQ5 140 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 ETFRF1Q6IPR1 90 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 CLEC19AQ6UXS0 136 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 GSG1LQ6UXU4 331 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 ETV3LQ6ZN32 361 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 C19orf35Q6ZS72 473 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 ATP6V0BQ99437 205 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 C21orf62Q9NYP8 219 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 ZMAT5Q9UDW3 170 aaKnown RBP9.64□□□□□ -0.87
HDAC4-207ENST00000461113 HERC2O95714 4834 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 PCLOQ9Y6V0 5065 aa9.64□□□□□ -0.87
HDAC4-207ENST00000461113 OVOL1O14753 267 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 SYNGR2O43760 224 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 SSNA1O43805 119 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 PITX3O75364 302 aa9.63□□□□□ -0.87
HDAC4-207ENST00000461113 SCGB1D2O95969 90 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms