RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 DEFB121Q5J5C9 76 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 SSX9Q7RTT3 188 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 OR2T10Q8NGZ9 312 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 IGHV2-26A0A0B4J1V2 119 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 OPN1MWP04001 364 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 OPN1MW2P0DN77 364 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 OPN1MW3P0DN78 364 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 TAGLN2P37802 199 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 VMA21Q3ZAQ7 101 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 TMEM41BQ5BJD5 291 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 LHFPL4Q7Z7J7 247 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 TMEM217Q8N7C4 229 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 OR52L2PQ8NGH6 319 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 OR1L1Q8NH94 360 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 TMEM170AQ8WVE7 144 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 UNKLQ9H9P5 680 aaKnown RBP5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 SLC35D1Q9NTN3 355 aa5.96□□□□□ -1.46
CDC42BPA-208ENST00000442054 A0A1B0GV50 99 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 M0QZK8 103 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 NXPH3O95157 252 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 IFNA17P01571 189 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 TYMSP04818 313 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 SERPINE2P07093 398 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 HILS1P60008 231 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 PAX8Q06710 450 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 PNRC1Q12796 327 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 MINOS1Q5TGZ0 78 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 OR51G1Q8NGK1 321 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 CD300LFQ8TDQ1 290 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 CACNG5Q9UF02 275 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 LINC00527Q9UJ94 153 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 VPREB3Q9UKI3 123 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 MINOS1-NBL1R4GNA1 71 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 MGAM2Q2M2H8 2515 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 C15orf65H3BRN8 121 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 DFFBO76075 338 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 VENTXO95231 258 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 PRH1P02810 166 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 CYP2G1PQ6ZSU1 146 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 TMEM144Q7Z5S9 345 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 TAF15Q92804 592 aaKnown RBP eCLIP5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 COQ2Q96H96 371 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 C14orf144Q96I85 54 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 OR5B12Q96R08 314 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 HIST1H2BLQ99880 126 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 RBKSQ9H477 322 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 HIVEP1P15822 2718 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 RAI1Q7Z5J4 1906 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 AVPP01185 164 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 HBE1P02100 147 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 TNFRSF9Q07011 255 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 KIAA0141Q14154 515 aaPredicted RBP5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 SLC35E4Q6ICL7 350 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 SHISA2Q6UWI4 295 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 MRPL41Q8IXM3 137 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 TBX15Q96SF7 602 aa5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 TBL2Q9Y4P3 447 aaKnown RBP5.95□□□□□ -1.46
CDC42BPA-208ENST00000442054 ELOA3CA0A087WX78 387 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 CD33P20138 364 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 C1orf229Q6ZS94 237 aaPredicted RBP5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 OR4X1Q8NH49 305 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 OR51H1Q8NH63 302 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 NEU1Q99519 415 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 TANC2Q9HCD6 1990 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 H3BP45 60 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 WRBO00258 174 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 RAB29O14966 203 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 LGALS7P47929 136 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 UBE2KP61086 200 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 RPL15P61313 204 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 RPL23P62829 140 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 PRSS8Q16651 343 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 AKIRIN2Q53H80 203 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 ZNF645Q8N7E2 425 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 GPR61Q9BZJ8 451 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 OR2D2Q9H210 308 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 TMEM160Q9NX00 188 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 VAX2Q9UIW0 290 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 TENM4Q6N022 2769 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 CLPSL1A2RUU4 121 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 J3QR06 171 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 GGCTO75223 188 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 METTL15P1P0C7V9 234 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 RAB2AP61019 212 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 RPL23AP62750 156 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 GATAD1Q8WUU5 269 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 FLYWCH2Q96CP2 140 aaKnown RBP5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 NIPSNAP3BQ9BS92 247 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 CTDSP1Q9GZU7 261 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 GNB4Q9HAV0 340 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 ZFHX3Q15911 3703 aa5.94□□□□□ -1.46
CDC42BPA-208ENST00000442054 SH2D7A6NKC9 451 aaPredicted RBP5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 LINC00473A8K010 186 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 KBTBD11O94819 623 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 ACTL10Q5JWF8 245 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 ZNF383Q8NA42 475 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 COMMD5Q9GZQ3 224 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 SRD5A3Q9H8P0 318 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 C15orf62A8K5M9 175 aa5.93□□□□□ -1.46
CDC42BPA-208ENST00000442054 FCGR3BO75015 233 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms