RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 DUX4L9Q6RFH8 374 aaPredicted RBP4.94□□□□□ -1.62
SPEN-202ENST00000438066 C19orf35Q6ZS72 473 aa4.94□□□□□ -1.62
SPEN-202ENST00000438066 TCF23Q7RTU1 214 aa4.94□□□□□ -1.62
SPEN-202ENST00000438066 BAP18Q8IXM2 172 aa4.94□□□□□ -1.62
SPEN-202ENST00000438066 TMEM190Q8WZ59 177 aa4.94□□□□□ -1.62
SPEN-202ENST00000438066 LSM10Q969L4 123 aaKnown RBP4.94□□□□□ -1.62
SPEN-202ENST00000438066 REG4Q9BYZ8 158 aa4.94□□□□□ -1.62
SPEN-202ENST00000438066 LINC00574Q9H8X3 128 aa4.94□□□□□ -1.62
SPEN-202ENST00000438066 OR2S2Q9NQN1 319 aa4.94□□□□□ -1.62
SPEN-202ENST00000438066 DUX4Q9UBX2 424 aa4.94□□□□□ -1.62
SPEN-202ENST00000438066 JPT1Q9UK76 154 aa4.94□□□□□ -1.62
SPEN-202ENST00000438066 A0A1B0GU03 582 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 MEX3AA1L020 520 aaKnown RBP4.93□□□□□ -1.62
SPEN-202ENST00000438066 K7EQG2 157 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 FGF16O43320 207 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 YPEL1O60688 119 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 RAMP3O60896 148 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 P0C879 139 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 LOXP28300 417 aaPredicted RBP4.93□□□□□ -1.62
SPEN-202ENST00000438066 NDUFV3P56181 108 aaKnown RBP4.93□□□□□ -1.62
SPEN-202ENST00000438066 TMEM33P57088 247 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 RPL30P62888 115 aaKnown RBP4.93□□□□□ -1.62
SPEN-202ENST00000438066 TFF3Q07654 80 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 LY6DQ14210 128 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 GPR157Q5UAW9 335 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 RPL7L1Q6DKI1 246 aaKnown RBP4.93□□□□□ -1.62
SPEN-202ENST00000438066 PDZD9Q8IXQ8 264 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 ZCCHC24Q8N2G6 241 aaKnown RBP4.93□□□□□ -1.62
SPEN-202ENST00000438066 KIR3DL3Q8N743 410 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 FAM216BQ8N7L0 139 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 YPEL2Q96QA6 119 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 ARV1Q9H2C2 271 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 GEMIN7Q9H840 131 aaKnown RBP4.93□□□□□ -1.62
SPEN-202ENST00000438066 PLEKHF2Q9H8W4 249 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 CALYQ9NYX4 217 aa4.93□□□□□ -1.62
SPEN-202ENST00000438066 CSDC2Q9Y534 153 aaKnown RBP4.93□□□□□ -1.62
SPEN-202ENST00000438066 RBM7Q9Y580 266 aaKnown RBP4.93□□□□□ -1.62
SPEN-202ENST00000438066 YLPM1P49750 1951 aaKnown RBP4.92□□□□□ -1.62
SPEN-202ENST00000438066 DOCK11Q5JSL3 2073 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 IGHV3-43A0A0B4J1X8 118 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 KBTBD11-OT1A0A1B0GTJ5 212 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 ITGB1BP1O14713 200 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 FCN3O75636 299 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 ATP5LO75964 103 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 TMEM50AO95807 157 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 GYPAP02724 150 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 IGHV3-43DP0DP04 118 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 EDDM3BP56851 147 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 POLR2GP62487 172 aaKnown RBP eCLIP4.92□□□□□ -1.62
SPEN-202ENST00000438066 LAGE3Q14657 143 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 AANATQ16613 207 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 C17orf58Q2M2W7 97 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 TIGITQ495A1 244 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 ZNF876PQ49A33 203 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 MORN2Q502X0 79 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 FAM120AOSQ5T036 256 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 LINC00242Q5T6M2 205 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 THOC7Q6I9Y2 204 aaKnown RBP4.92□□□□□ -1.62
SPEN-202ENST00000438066 EIF4E3Q8N5X7 224 aaKnown RBP4.92□□□□□ -1.62
SPEN-202ENST00000438066 TCTEX1D1Q8N7M0 179 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 UBAC2Q8NBM4 344 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 LINC01560Q8TB33 94 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 GPR146Q96CH1 333 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 CCL13Q99616 98 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 NARFLQ9H6Q4 476 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 LYRM2Q9NU23 88 aaPredicted RBP4.92□□□□□ -1.62
SPEN-202ENST00000438066 SDHAF2Q9NX18 166 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 COA4Q9NYJ1 87 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 CLN8Q9UBY8 286 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 PSG11Q9UQ72 335 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 ZFYVE26Q68DK2 2539 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 TRAV38-1A0A0B4J264 116 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 IGSF23A1L1A6 192 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 C17orf98A8MV24 154 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 A8MXK9 166 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 DEFB108AA8MXU0 73 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 SSSCA1O60232 199 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 AKR1C2P52895 323 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 EIF5AP63241 154 aaKnown RBP4.92□□□□□ -1.62
SPEN-202ENST00000438066 CATR1Q13166 79 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 TMEM30BQ3MIR4 351 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 Q3ZCU0 254 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 UTF1Q5T230 341 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 HSD17B13Q7Z5P4 300 aaPredicted RBP4.92□□□□□ -1.62
SPEN-202ENST00000438066 ZNF439Q8NDP4 499 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 DEFB108BQ8NET1 73 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 HSD17B10Q99714 261 aaKnown RBP4.92□□□□□ -1.62
SPEN-202ENST00000438066 IFI27L2Q9H2X8 130 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 WFDC1Q9HC57 220 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 DYNLRB1Q9NP97 96 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 ZC4H2Q9NQZ6 224 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 CACNG5Q9UF02 275 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 MLXQ9UH92 298 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 MMP24Q9Y5R2 645 aa4.92□□□□□ -1.62
SPEN-202ENST00000438066 TET2Q6N021 2002 aaPredicted RBP4.91□□□□□ -1.62
SPEN-202ENST00000438066 DOPEY1Q5JWR5 2465 aa4.91□□□□□ -1.62
SPEN-202ENST00000438066 TRGV10A0A0A0MS01 117 aa4.91□□□□□ -1.62
SPEN-202ENST00000438066 ZNF729A6NN14 1252 aaPredicted RBP4.91□□□□□ -1.62
SPEN-202ENST00000438066 IGLV2-11P01706 119 aa4.91□□□□□ -1.62
SPEN-202ENST00000438066 PVALBP20472 110 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms