RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 PPP1R35Q8TAP8 253 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 K7EP13 123 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 MZT1Q08AG7 82 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 PDLIM3Q53GG5 364 aaPredicted RBP8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 ZADH2Q8N4Q0 377 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 KLHDC1Q8N7A1 406 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 OR52E5Q8NH55 327 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 SGMS2Q8NHU3 365 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 HINT2Q9BX68 163 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 LSM4Q9Y4Z0 139 aaKnown RBP8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 ZGRF1Q86YA3 2104 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 IGLV3-9A0A075B6K5 115 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 KBTBD11-OT1A0A1B0GTJ5 212 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 SCO2A0A1W2PP80 73 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 C15orf61A6NNL5 157 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 FOXH1O75593 365 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 IGKV1-16P04430 117 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 CBLN1P23435 193 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 OPRK1P41145 380 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 RAB1CQ92928 201 aa8.53□□□□□ -1.04
CLSTN1-203ENST00000435891 FAM90A9PA6NNJ1 464 aa8.52□□□□□ -1.04
CLSTN1-203ENST00000435891 TM4SF5O14894 197 aa8.52□□□□□ -1.04
CLSTN1-203ENST00000435891 IGHV1-46P01743 117 aa8.52□□□□□ -1.04
CLSTN1-203ENST00000435891 STAG3L2P0CL84 134 aa8.52□□□□□ -1.04
CLSTN1-203ENST00000435891 STAG3L3P0CL85 134 aa8.52□□□□□ -1.04
CLSTN1-203ENST00000435891 TMPRSS3P57727 454 aa8.52□□□□□ -1.04
CLSTN1-203ENST00000435891 ZNF90Q03938 601 aa8.52□□□□□ -1.04
CLSTN1-203ENST00000435891 YTHDF2Q9Y5A9 579 aaKnown RBP8.52□□□□□ -1.04
CLSTN1-203ENST00000435891 SRRM4A7MD48 611 aaKnown RBP8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 BMI1P35226 326 aa8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 ADMP35318 185 aa8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 PAFAH1B2P68402 229 aa8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 OR4S2Q8NH73 311 aa8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 SMIM12Q96EX1 92 aa8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 IDI2-AS1Q9NZ38 188 aa8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 CUL9Q8IWT3 2517 aa8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 DYSFO75923 2080 aa8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 CA2P00918 260 aa8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 STUMQ69YW2 141 aa8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 ZNF439Q8NDP4 499 aa8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 GAFA1Q96PS6 74 aa8.52□□□□□ -1.05
CLSTN1-203ENST00000435891 GNG7O60262 68 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 VENTXO95231 258 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 PDLIM4P50479 330 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 TEX43Q6ZNM6 134 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 C1orf174Q8IYL3 243 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 STPG3Q8N7X2 389 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 OR2D3Q8NGH3 330 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 ST6GALNAC6Q969X2 333 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 ANAPC16Q96DE5 110 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 TMEM14BQ9NUH8 114 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 WASHC3Q9Y3C0 194 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 FCN1O00602 326 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 HYPMO75409 117 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 TOX4O94842 621 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 IGFBP2P18065 325 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 TNFAIP6P98066 277 aaPredicted RBP8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 EFNB3Q15768 340 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 FAM222BQ8WU58 562 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 KCNIP2Q9NS61 270 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 RNF7Q9UBF6 113 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 PDE6DO43924 150 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 MPDU1O75352 247 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 NPY1RP25929 384 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 CCL8P80075 99 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 MLANAQ16655 118 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 NIT1Q86X76 327 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 RND1Q92730 232 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 BORCS7Q96B45 105 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 NPVFQ9HCQ7 196 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 APC2O95996 2303 aa8.51□□□□□ -1.05
CLSTN1-203ENST00000435891 MDFIC2A0A1B0GVS7 189 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 TMPRSS2O15393 492 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 GATA2P23769 480 aaPredicted RBP8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 HSPE1P61604 102 aaKnown RBP8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 KIAA1644Q3SXP7 199 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 PLXNB1O43157 2135 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 NAV3Q8IVL0 2385 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 IGKV1OR2-108A0A075B7D4 117 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 TRGV10A0A0A0MS01 117 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 TRGV8A0A0C4DH27 118 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 FCN3O75636 299 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 ACTL6BO94805 426 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 CD99P14209 185 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 GATA4P43694 442 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 THBS3P49746 956 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 TMEM249Q2WGJ8 235 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 AMMECR1LQ6DCA0 310 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 RBMXL3Q8N7X1 1067 aaKnown RBP8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 PPBPP02775 128 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 CT45A6P0DMU7 189 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 CT45A5P0DMU8 189 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 CT45A7P0DMV0 189 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 Q6ZS92 163 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 OCC1Q8TAD7 63 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 SLC45A2Q9UMX9 530 aa8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 FOXA2Q9Y261 457 aaPredicted RBP8.5□□□□□ -1.05
CLSTN1-203ENST00000435891 CEP295Q9C0D2 2601 aa8.49□□□□□ -1.05
CLSTN1-203ENST00000435891 IER3P46695 156 aa8.49□□□□□ -1.05
CLSTN1-203ENST00000435891 TEPPQ6URK8 271 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms