RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 C8orf88P0DMB2 117 aa13.22□□□□□ -0.29
NUP50-208ENST00000430547 UCP1P25874 307 aa13.22□□□□□ -0.29
NUP50-208ENST00000430547 HOXA1P49639 335 aaPredicted RBP13.22□□□□□ -0.29
NUP50-208ENST00000430547 MCFD2Q8NI22 146 aa13.22□□□□□ -0.29
NUP50-208ENST00000430547 CITED4Q96RK1 184 aa13.22□□□□□ -0.29
NUP50-208ENST00000430547 SLIRPQ9GZT3 109 aaKnown RBP13.22□□□□□ -0.29
NUP50-208ENST00000430547 WFDC10AQ9H1F0 79 aa13.22□□□□□ -0.29
NUP50-208ENST00000430547 HUWE1Q7Z6Z7 4374 aaKnown RBP13.22□□□□□ -0.29
NUP50-208ENST00000430547 CCDC160A6NGH7 325 aa13.21□□□□□ -0.29
NUP50-208ENST00000430547 F8W735 103 aaPredicted RBP13.21□□□□□ -0.29
NUP50-208ENST00000430547 ST8SIA3O43173 380 aa13.21□□□□□ -0.29
NUP50-208ENST00000430547 GNG7O60262 68 aa13.21□□□□□ -0.29
NUP50-208ENST00000430547 MT-CO2P00403 227 aa13.21□□□□□ -0.29
NUP50-208ENST00000430547 OR5AC1P0C628 307 aa13.21□□□□□ -0.29
NUP50-208ENST00000430547 SUB1P53999 127 aaKnown RBP eCLIP13.21□□□□□ -0.29
NUP50-208ENST00000430547 LAMTOR1Q6IAA8 161 aa13.21□□□□□ -0.29
NUP50-208ENST00000430547 TXN2Q99757 166 aa13.21□□□□□ -0.29
NUP50-208ENST00000430547 TMEM222Q9H0R3 208 aa13.21□□□□□ -0.29
NUP50-208ENST00000430547 NAA60Q9H7X0 242 aa13.21□□□□□ -0.29
NUP50-208ENST00000430547 IGHV3OR16-8A0A075B7F1 116 aa13.2□□□□□ -0.3
NUP50-208ENST00000430547 A0A0B4J293 547 aa13.2□□□□□ -0.3
NUP50-208ENST00000430547 FABP12A6NFH5 140 aa13.2□□□□□ -0.3
NUP50-208ENST00000430547 I3L2K1 104 aa13.2□□□□□ -0.3
NUP50-208ENST00000430547 GSTZ1O43708 216 aaPredicted RBP13.2□□□□□ -0.3
NUP50-208ENST00000430547 YIF1AO95070 293 aa13.2□□□□□ -0.3
NUP50-208ENST00000430547 P0C879 139 aa13.2□□□□□ -0.3
NUP50-208ENST00000430547 ADMP35318 185 aa13.2□□□□□ -0.3
NUP50-208ENST00000430547 FAM219AQ8IW50 185 aa13.2□□□□□ -0.3
NUP50-208ENST00000430547 OR51S1Q8NGJ8 323 aa13.2□□□□□ -0.3
NUP50-208ENST00000430547 C5orf66Q9H5L9 145 aa13.2□□□□□ -0.3
NUP50-208ENST00000430547 MCUBQ9NWR8 336 aa13.2□□□□□ -0.3
NUP50-208ENST00000430547 SCP2D1Q9UJQ7 156 aa13.2□□□□□ -0.3
NUP50-208ENST00000430547 ANKRD20A5PA0PJZ0 165 aa13.19□□□□□ -0.3
NUP50-208ENST00000430547 C15orf62A8K5M9 175 aa13.19□□□□□ -0.3
NUP50-208ENST00000430547 CORTO00230 105 aa13.19□□□□□ -0.3
NUP50-208ENST00000430547 ZNF207O43670 478 aaKnown RBP13.19□□□□□ -0.3
NUP50-208ENST00000430547 IGHV3-48P01763 117 aa13.19□□□□□ -0.3
NUP50-208ENST00000430547 CTSGP08311 255 aa13.19□□□□□ -0.3
NUP50-208ENST00000430547 LYL1P12980 280 aa13.19□□□□□ -0.3
NUP50-208ENST00000430547 FCGR2BP31994 310 aaPredicted RBP13.19□□□□□ -0.3
NUP50-208ENST00000430547 TNFSF8P32971 234 aa13.19□□□□□ -0.3
NUP50-208ENST00000430547 DHODHQ02127 395 aa13.19□□□□□ -0.3
NUP50-208ENST00000430547 RBPMSQ93062 196 aaKnown RBP13.19□□□□□ -0.3
NUP50-208ENST00000430547 SCGB3A2Q96PL1 93 aa13.19□□□□□ -0.3
NUP50-208ENST00000430547 SPAG8Q99932 426 aaPredicted RBP13.19□□□□□ -0.3
NUP50-208ENST00000430547 RTBDNQ9BSG5 229 aaPredicted RBP13.19□□□□□ -0.3
NUP50-208ENST00000430547 NBEAL2Q6ZNJ1 2754 aa13.18□□□□□ -0.3
NUP50-208ENST00000430547 CRYM-AS1A6NIL9 109 aa13.18□□□□□ -0.3
NUP50-208ENST00000430547 INS-IGF2F8WCM5 200 aa13.18□□□□□ -0.3
NUP50-208ENST00000430547 K7EMT4 169 aa13.18□□□□□ -0.3
NUP50-208ENST00000430547 CDS2O95674 445 aa13.18□□□□□ -0.3
NUP50-208ENST00000430547 ETV6P41212 452 aa13.18□□□□□ -0.3
NUP50-208ENST00000430547 NPBWR1P48145 328 aa13.18□□□□□ -0.3
NUP50-208ENST00000430547 LINC00322Q6ZN03 302 aaPredicted RBP13.18□□□□□ -0.3
NUP50-208ENST00000430547 DUSP18Q8NEJ0 188 aa13.18□□□□□ -0.3
NUP50-208ENST00000430547 GPR132Q9UNW8 380 aa13.18□□□□□ -0.3
NUP50-208ENST00000430547 A0A0G2JRQ6 117 aa13.17□□□□□ -0.3
NUP50-208ENST00000430547 RBMY1BA6NDE4 496 aaKnown RBP13.17□□□□□ -0.3
NUP50-208ENST00000430547 RBMY1EA6NEQ0 496 aaKnown RBP13.17□□□□□ -0.3
NUP50-208ENST00000430547 TSPAN4O14817 238 aa13.17□□□□□ -0.3
NUP50-208ENST00000430547 RBMY1DP0C7P1 496 aaKnown RBP13.17□□□□□ -0.3
NUP50-208ENST00000430547 TMEM268Q5VZI3 342 aa13.17□□□□□ -0.3
NUP50-208ENST00000430547 GLYATL2Q8WU03 294 aa13.17□□□□□ -0.3
NUP50-208ENST00000430547 NXF2Q9GZY0 626 aaKnown RBP13.17□□□□□ -0.3
NUP50-208ENST00000430547 HIPK2Q9H2X6 1198 aa13.17□□□□□ -0.3
NUP50-208ENST00000430547 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.17□□□□□ -0.3
NUP50-208ENST00000430547 KCNIP3Q9Y2W7 256 aa13.17□□□□□ -0.3
NUP50-208ENST00000430547 SCGB2A1O75556 95 aa13.16□□□□□ -0.3
NUP50-208ENST00000430547 S100A5P33763 92 aa13.16□□□□□ -0.3
NUP50-208ENST00000430547 FAUP35544 74 aaKnown RBP13.16□□□□□ -0.3
NUP50-208ENST00000430547 SPCS3P61009 180 aa13.16□□□□□ -0.3
NUP50-208ENST00000430547 CASC10Q5T4H9 136 aa13.16□□□□□ -0.3
NUP50-208ENST00000430547 GINS3Q9BRX5 216 aa13.16□□□□□ -0.3
NUP50-208ENST00000430547 RETNQ9HD89 108 aa13.16□□□□□ -0.3
NUP50-208ENST00000430547 KMT2CQ8NEZ4 4911 aaKnown RBP13.16□□□□□ -0.3
NUP50-208ENST00000430547 OR4C46A6NHA9 309 aa13.15□□□□□ -0.3
NUP50-208ENST00000430547 RNASE2P10153 161 aaKnown RBP13.15□□□□□ -0.3
NUP50-208ENST00000430547 BMI1P35226 326 aa13.15□□□□□ -0.3
NUP50-208ENST00000430547 OPRK1P41145 380 aa13.15□□□□□ -0.3
NUP50-208ENST00000430547 AP3S2P59780 193 aa13.15□□□□□ -0.3
NUP50-208ENST00000430547 PYDC2Q56P42 97 aa13.15□□□□□ -0.3
NUP50-208ENST00000430547 SELENOHQ8IZQ5 122 aaKnown RBP13.15□□□□□ -0.3
NUP50-208ENST00000430547 TMEM116Q8NCL8 245 aa13.15□□□□□ -0.3
NUP50-208ENST00000430547 LHFPL5Q8TAF8 219 aa13.15□□□□□ -0.3
NUP50-208ENST00000430547 FAM110AQ9BQ89 295 aa13.15□□□□□ -0.3
NUP50-208ENST00000430547 GGTLC1Q9BX51 225 aa13.15□□□□□ -0.3
NUP50-208ENST00000430547 EDA2RQ9HAV5 297 aa13.15□□□□□ -0.3
NUP50-208ENST00000430547 CACNG5Q9UF02 275 aa13.15□□□□□ -0.3
NUP50-208ENST00000430547 LOC102724200A0A096LPH7 203 aaPredicted RBP13.14□□□□□ -0.31
NUP50-208ENST00000430547 TRAV14DV4A0A0A6YYC5 116 aa13.14□□□□□ -0.31
NUP50-208ENST00000430547 IGHV7-4-1A0A0J9YVY3 117 aa13.14□□□□□ -0.31
NUP50-208ENST00000430547 Q6ZRM9 215 aa13.14□□□□□ -0.31
NUP50-208ENST00000430547 OR52E5Q8NH55 327 aa13.14□□□□□ -0.31
NUP50-208ENST00000430547 OR10C1Q96KK4 312 aa13.14□□□□□ -0.31
NUP50-208ENST00000430547 SOSTQ9BQB4 213 aa13.14□□□□□ -0.31
NUP50-208ENST00000430547 RHPN1-AS1Q9BWJ2 59 aa13.14□□□□□ -0.31
NUP50-208ENST00000430547 HEYLQ9NQ87 328 aaPredicted RBP13.14□□□□□ -0.31
NUP50-208ENST00000430547 UBQLN2Q9UHD9 624 aa13.14□□□□□ -0.31
NUP50-208ENST00000430547 SMPXQ9UHP9 88 aa13.14□□□□□ -0.31
NUP50-208ENST00000430547 DNAH7Q8WXX0 4024 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms