RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 CDC42P60953 191 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 RPL19P84098 196 aaKnown RBP1.28□□□□□ -2.2
GYPB-201ENST00000429670 MIR17HGQ75NE6 70 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 LYG2Q86SG7 212 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 KTN1-AS1Q86SY8 53 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 DHFR2Q86XF0 187 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 C10orf126Q8N4M7 172 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 DCANP1Q8TF63 244 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 TMEM106AQ96A25 262 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 TIMM21Q9BVV7 248 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 IMUPQ9GZP8 106 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 TMEM133Q9H2Q1 129 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 BOLA2Q9H3K6 86 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 ENY2Q9NPA8 101 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 OPTCQ9UBM4 332 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 CKLFQ9UBR5 152 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 COL4A2P08572 1712 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 ICE1Q9Y2F5 2266 aa1.28□□□□□ -2.2
GYPB-201ENST00000429670 DISP1Q96F81 1524 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 FMN1Q68DA7 1419 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 ROCK1Q13464 1354 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 TRAV4A0A0B4J268 109 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 TRAPPC13A5PLN9 417 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 HMSDA8MTL9 139 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 TMEM238C9JI98 176 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 J3QQQ9 107 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 C1QCP02747 245 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 HTR1AP08908 422 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 P0DMU3 169 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 FAM231AP0DMU4 169 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 FAM231CP0DMU5 169 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 IFI30P13284 250 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 CASP1P29466 404 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 ERP29P30040 261 aaKnown RBP1.27□□□□□ -2.21
GYPB-201ENST00000429670 RPL26P61254 145 aaKnown RBP1.27□□□□□ -2.21
GYPB-201ENST00000429670 SUPT4H1P63272 117 aaKnown RBP1.27□□□□□ -2.21
GYPB-201ENST00000429670 HES1Q14469 280 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 FAM27BQ5VT28 67 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 TRAPPC6BQ86SZ2 158 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 HSPB9Q9BQS6 159 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 SLC39A9Q9NUM3 307 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 RPL26L1Q9UNX3 145 aaKnown RBP1.27□□□□□ -2.21
GYPB-201ENST00000429670 TRPM6Q9BX84 2022 aa1.27□□□□□ -2.21
GYPB-201ENST00000429670 MYO16Q9Y6X6 1858 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 DENND4BO75064 1496 aaPredicted RBP1.26□□□□□ -2.21
GYPB-201ENST00000429670 RFPL4AA6NLU0 287 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 RFPL4AL1F8VTS6 287 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 AIPO00170 330 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 OR5F1O95221 314 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 IFNA1P01562 189 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 CLPSP04118 112 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 SPI1P17947 270 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 S100A4P26447 101 aaKnown RBP1.26□□□□□ -2.21
GYPB-201ENST00000429670 VBP1P61758 197 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 KISS1Q15726 138 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 LINC01554Q52M75 96 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 LYRM7Q5U5X0 104 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 LCA10Q71F78 164 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 HIST3H2BBQ8N257 126 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 OR8B3Q8NGG8 313 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 SLC25A40Q8TBP6 338 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 SH3BGRL3Q9H299 93 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 NHP2Q9NX24 153 aaKnown RBP1.26□□□□□ -2.21
GYPB-201ENST00000429670 EPDR1Q9UM22 224 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 BAIAP2Q9UQB8 552 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 ERGIC3Q9Y282 383 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 LHFPL6Q9Y693 200 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 SIPA1L1O43166 1804 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 CUL9Q8IWT3 2517 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 SMARCA4P51532 1647 aa1.26□□□□□ -2.21
GYPB-201ENST00000429670 TOPBP1Q92547 1522 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 RIC1Q4ADV7 1423 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 NYNRINQ9P2P1 1898 aaKnown RBP1.25□□□□□ -2.21
GYPB-201ENST00000429670 IBA57-AS1B1ANH7 110 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 TRAPPC2LH3BP13 241 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 CIAO1O76071 339 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 IFNA7P01567 189 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 PPBPP02775 128 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 RPSAP08865 295 aaKnown RBP1.25□□□□□ -2.21
GYPB-201ENST00000429670 PPP1R2P41236 205 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 ZNF345Q14585 488 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 KRTAP13-4Q3LI77 160 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 PCOTHQ58A44 107 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 PPP1R2P3Q6NXS1 205 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 S100A7AQ86SG5 101 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 KRTAP13-1Q8IUC0 172 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 C9orf163Q8N9P6 203 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 OR4D11Q8NGI4 311 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 SPACA4Q8TDM5 124 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 YIPF3Q9GZM5 350 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 CENPHQ9H3R5 247 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 LYRM2Q9NU23 88 aaPredicted RBP1.25□□□□□ -2.21
GYPB-201ENST00000429670 PRNDQ9UKY0 176 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 ADAMTS7Q9UKP4 1686 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 CAMSAP1Q5T5Y3 1602 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 DOCK6Q96HP0 2047 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 HECW2Q9P2P5 1572 aa1.25□□□□□ -2.21
GYPB-201ENST00000429670 PXDNLA1KZ92 1463 aa1.24□□□□□ -2.21
GYPB-201ENST00000429670 ITGB4P16144 1822 aa1.24□□□□□ -2.21
GYPB-201ENST00000429670 LTBP2Q14767 1821 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms