RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 IGKV1-5P01602 117 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 CD7P09564 240 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 HSPE1P61604 102 aaKnown RBP9.57□□□□□ -0.88
SGCE-203ENST00000425444 SPSB3Q6PJ21 355 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 SLC16A13Q7RTY0 426 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 OR2C3Q8N628 320 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 SLC35G3Q8N808 338 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 OR4C16Q8NGL9 310 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 GATAD1Q8WUU5 269 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 TMEM190Q8WZ59 177 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 LINC00476Q8WZB0 136 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 MARC2Q969Z3 335 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 PINX1Q96BK5 328 aaKnown RBP9.57□□□□□ -0.88
SGCE-203ENST00000425444 SPATA25Q9BR10 227 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 SLIRPQ9GZT3 109 aaKnown RBP9.57□□□□□ -0.88
SGCE-203ENST00000425444 MLXQ9UH92 298 aa9.57□□□□□ -0.88
SGCE-203ENST00000425444 RSL24D1Q9UHA3 163 aaKnown RBP9.57□□□□□ -0.88
SGCE-203ENST00000425444 TEX13DA0A0J9YY54 714 aaPredicted RBP9.56□□□□□ -0.88
SGCE-203ENST00000425444 ZNF785A8K8V0 405 aa9.56□□□□□ -0.88
SGCE-203ENST00000425444 B3GALNT1O75752 331 aa9.56□□□□□ -0.88
SGCE-203ENST00000425444 SCAF4O95104 1147 aaKnown RBP9.56□□□□□ -0.88
SGCE-203ENST00000425444 HOXA1P49639 335 aaPredicted RBP9.56□□□□□ -0.88
SGCE-203ENST00000425444 ELLP55199 621 aaPredicted RBP9.56□□□□□ -0.88
SGCE-203ENST00000425444 RBPMS2Q6ZRY4 209 aaKnown RBP9.56□□□□□ -0.88
SGCE-203ENST00000425444 TMEM61Q8N0U2 210 aa9.56□□□□□ -0.88
SGCE-203ENST00000425444 ZNF114Q8NC26 417 aa9.56□□□□□ -0.88
SGCE-203ENST00000425444 PRRT1Q99946 306 aa9.56□□□□□ -0.88
SGCE-203ENST00000425444 CHRDL1Q9BU40 450 aa9.56□□□□□ -0.88
SGCE-203ENST00000425444 C20orf24Q9BUV8 137 aa9.56□□□□□ -0.88
SGCE-203ENST00000425444 ZNF436Q9C0F3 470 aaPredicted RBP9.56□□□□□ -0.88
SGCE-203ENST00000425444 NAA60Q9H7X0 242 aa9.56□□□□□ -0.88
SGCE-203ENST00000425444 ENY2Q9NPA8 101 aa9.56□□□□□ -0.88
SGCE-203ENST00000425444 MRPL27Q9P0M9 148 aaKnown RBP9.56□□□□□ -0.88
SGCE-203ENST00000425444 MUC4Q99102 2169 aa9.56□□□□□ -0.88
SGCE-203ENST00000425444 FABP12A6NFH5 140 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 OR11H12B2RN74 326 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 NDUFA4O00483 81 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 NUPL2O15504 423 aaKnown RBP9.55□□□□□ -0.88
SGCE-203ENST00000425444 ST8SIA3O43173 380 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 GSTZ1O43708 216 aaPredicted RBP9.55□□□□□ -0.88
SGCE-203ENST00000425444 OR5AC1P0C628 307 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 UCP1P25874 307 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 SNCAP37840 140 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 SURF2Q15527 256 aaPredicted RBP9.55□□□□□ -0.88
SGCE-203ENST00000425444 HAGHQ16775 308 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 DEFB125Q8N687 156 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 OR51S1Q8NGJ8 323 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 OR52B4Q8NGK2 314 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 ATP6V0BQ99437 205 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 WFDC10AQ9H1F0 79 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 SRD5A3Q9H8P0 318 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 DAZ1Q9NQZ3 744 aaKnown RBP9.55□□□□□ -0.88
SGCE-203ENST00000425444 MCUBQ9NWR8 336 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 SCP2D1Q9UJQ7 156 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 CEPT1Q9Y6K0 416 aa9.55□□□□□ -0.88
SGCE-203ENST00000425444 IGHV3OR16-8A0A075B7F1 116 aa9.54□□□□□ -0.88
SGCE-203ENST00000425444 A0A0B4J293 547 aa9.54□□□□□ -0.88
SGCE-203ENST00000425444 ANKRD20A5PA0PJZ0 165 aa9.54□□□□□ -0.88
SGCE-203ENST00000425444 F8W735 103 aaPredicted RBP9.54□□□□□ -0.88
SGCE-203ENST00000425444 ZNF207O43670 478 aaKnown RBP9.54□□□□□ -0.88
SGCE-203ENST00000425444 YIF1AO95070 293 aa9.54□□□□□ -0.88
SGCE-203ENST00000425444 MT-CO2P00403 227 aa9.54□□□□□ -0.88
SGCE-203ENST00000425444 TNFSF8P32971 234 aa9.54□□□□□ -0.88
SGCE-203ENST00000425444 MFAP4P55083 255 aa9.54□□□□□ -0.88
SGCE-203ENST00000425444 RELQ04864 619 aaPredicted RBP9.54□□□□□ -0.88
SGCE-203ENST00000425444 ANKRD55Q3KP44 614 aa9.54□□□□□ -0.88
SGCE-203ENST00000425444 RTBDNQ9BSG5 229 aaPredicted RBP9.54□□□□□ -0.88
SGCE-203ENST00000425444 TMEM222Q9H0R3 208 aa9.54□□□□□ -0.88
SGCE-203ENST00000425444 C5orf66Q9H5L9 145 aa9.54□□□□□ -0.88
SGCE-203ENST00000425444 TRAV25A0A0B4J276 109 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 A0A0G2JRQ6 117 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 CRYM-AS1A6NIL9 109 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 I3L2K1 104 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 GNG7O60262 68 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 IGHV3-48P01763 117 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 P0C879 139 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 C8orf88P0DMB2 117 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 S100A5P33763 92 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 ADMP35318 185 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 ETV6P41212 452 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 SUB1P53999 127 aaKnown RBP eCLIP9.53□□□□□ -0.88
SGCE-203ENST00000425444 DHODHQ02127 395 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 TMEM268Q5VZI3 342 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 LAMTOR1Q6IAA8 161 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 FAM219AQ8IW50 185 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 RBPMSQ93062 196 aaKnown RBP9.53□□□□□ -0.88
SGCE-203ENST00000425444 SCGB3A2Q96PL1 93 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 TXN2Q99757 166 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 NXF2Q9GZY0 626 aaKnown RBP9.53□□□□□ -0.88
SGCE-203ENST00000425444 GPR132Q9UNW8 380 aa9.53□□□□□ -0.88
SGCE-203ENST00000425444 CDS2O95674 445 aa9.52□□□□□ -0.89
SGCE-203ENST00000425444 CTSGP08311 255 aa9.52□□□□□ -0.89
SGCE-203ENST00000425444 FAUP35544 74 aaKnown RBP9.52□□□□□ -0.89
SGCE-203ENST00000425444 PYDC2Q56P42 97 aa9.52□□□□□ -0.89
SGCE-203ENST00000425444 C15orf62A8K5M9 175 aa9.51□□□□□ -0.89
SGCE-203ENST00000425444 INS-IGF2F8WCM5 200 aa9.51□□□□□ -0.89
SGCE-203ENST00000425444 CORTO00230 105 aa9.51□□□□□ -0.89
SGCE-203ENST00000425444 FCGR2BP31994 310 aaPredicted RBP9.51□□□□□ -0.89
SGCE-203ENST00000425444 NPBWR1P48145 328 aa9.51□□□□□ -0.89
SGCE-203ENST00000425444 AP3S2P59780 193 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 140.8 ms