RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 ZNF728P0DKX0 622 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 ERGP11308 486 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 PGCP20142 388 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 VDAC1P21796 283 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 F2RP25116 425 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 PIGPP57054 158 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 GNG3P63215 75 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 HIST1H1AQ02539 215 aaPredicted RBP2.14□□□□□ -2.07
LINC01040-201ENST00000425048 FUT5Q11128 374 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 CDK5R1Q15078 307 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 CDKN3Q16667 212 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 HIST3H3Q16695 136 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM128Q5BJH2 165 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 GCSAMLQ5JQS6 135 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 FAM78AQ5JUQ0 283 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF621Q6ZSS3 439 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 OLIG3Q7RTU3 272 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 NPWQ8N729 165 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 TCTEX1D1Q8N7M0 179 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 GATSQ8NAP1 163 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 TSTD1Q8NFU3 115 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 OR5AU1Q8NGC0 362 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 OR2AE1Q8NHA4 323 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 CLDND2Q8NHS1 167 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF563Q8TA94 476 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 CMTM2Q8TAZ6 248 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 FNDC9Q8TBE3 224 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 DOK4Q8TEW6 326 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 C2orf15Q8WU43 125 aaKnown RBP2.14□□□□□ -2.07
LINC01040-201ENST00000425048 NRGNQ92686 78 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 RAB8BQ92930 207 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 ZC2HC1AQ96GY0 325 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 OR10C1Q96KK4 312 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 C2orf50Q96LR7 162 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 OR5B12Q96R08 314 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 SDF2Q99470 211 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 SPIN2AQ99865 258 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 SPIN2BQ9BPZ2 258 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 DERL1Q9BUN8 251 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 OR51I1Q9H343 314 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 OR51I2Q9H344 312 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 CALHM2Q9HA72 323 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF160Q9HCG1 818 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 MANBALQ9NQG1 85 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 TAAR3PQ9P1P4 343 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 HSPB8Q9UJY1 196 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 HS3ST2Q9Y278 367 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF443Q9Y2A4 671 aaPredicted RBP2.14□□□□□ -2.07
LINC01040-201ENST00000425048 PXMP4Q9Y6I8 212 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF780BQ9Y6R6 833 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 SRCAPQ6ZRS2 3230 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 PCDH15Q96QU1 1955 aa2.14□□□□□ -2.07
LINC01040-201ENST00000425048 PTPRSQ13332 1948 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 KIAA1549LQ6ZVL6 1849 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 A0A087WUU8 490 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 MUC21A0A0G2JKD1 596 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 MUC21A0A140T8X8 626 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 MEIS3P1A6NDR6 274 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 SMIM9A6NGZ8 99 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 ANKRD30BLA7E2S9 258 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 CEACAM18A8MTB9 384 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 H0Y980 276 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.13□□□□□ -2.07
LINC01040-201ENST00000425048 SIRPB1O00241 398 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 SLC17A3O00476 420 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 CLDN5O00501 218 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 CCL22O00626 93 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 ERI3O43414 337 aaKnown RBP2.13□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM50AO95807 157 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 NRASP01111 189 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 KRASP01116 189 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 IGKV1D-16P01601 117 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 IGHV3-48P01763 117 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 IFNW1P05000 195 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 SERPINA7P05543 415 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 CSN2P05814 226 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 LINC00869P0C866 280 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 CD99P14209 185 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF43P17038 809 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 PRTN3P24158 256 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 IL3RAP26951 378 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 RPL12P30050 165 aaKnown RBP2.13□□□□□ -2.07
LINC01040-201ENST00000425048 OTX2P32243 289 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 PRSS3P35030 304 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 SRP14P37108 136 aaKnown RBP2.13□□□□□ -2.07
LINC01040-201ENST00000425048 GALR1P47211 349 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 P2RY1P47900 373 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 NPBWR2P48146 333 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 GNG4P50150 75 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 GPM6AP51674 278 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 EFNB2P52799 333 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 APOC4P55056 127 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 CCL23P55773 120 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 RHOBP62745 196 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 NTHL1P78549 312 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 MEF2BQ02080 365 aaPredicted RBP2.13□□□□□ -2.07
LINC01040-201ENST00000425048 Q0VG73 95 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 LAMTOR4Q0VGL1 99 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 IHHQ14623 411 aa2.13□□□□□ -2.07
LINC01040-201ENST00000425048 ELOCQ15369 112 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms