RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-206	ENST00000423161	TFPI2	P48307	235 aa		13.65	□□□□□ -0.22
SREBF1-206	ENST00000423161	ERH	P84090	104 aa	Known RBP	13.65	□□□□□ -0.22
SREBF1-206	ENST00000423161	IZUMO4	Q1ZYL8	232 aa		13.65	□□□□□ -0.22
SREBF1-206	ENST00000423161	RNASE12	Q5GAN4	147 aa	Known RBP	13.65	□□□□□ -0.22
SREBF1-206	ENST00000423161	IGHV3OR16-13	A0A075B7E8	117 aa		13.64	□□□□□ -0.23
SREBF1-206	ENST00000423161	TRAV14DV4	A0A0A6YYC5	116 aa		13.64	□□□□□ -0.23
SREBF1-206	ENST00000423161	IGHV3-74	A0A0B4J1X5	117 aa		13.64	□□□□□ -0.23
SREBF1-206	ENST00000423161	FAM25A	B3EWG3	89 aa		13.64	□□□□□ -0.23
SREBF1-206	ENST00000423161	FAM25C	B3EWG5	89 aa		13.64	□□□□□ -0.23
SREBF1-206	ENST00000423161	FAM25G	B3EWG6	89 aa		13.64	□□□□□ -0.23
SREBF1-206	ENST00000423161	LY6G6C	O95867	125 aa		13.64	□□□□□ -0.23
SREBF1-206	ENST00000423161	PGAM2	P15259	253 aa		13.64	□□□□□ -0.23
SREBF1-206	ENST00000423161	ZNF124	Q15973	351 aa		13.64	□□□□□ -0.23
SREBF1-206	ENST00000423161	SPINK9	Q5DT21	86 aa		13.64	□□□□□ -0.23
SREBF1-206	ENST00000423161	ATF4	P18848	351 aa	Predicted RBP	13.63	□□□□□ -0.23
SREBF1-206	ENST00000423161	PI3	P19957	117 aa		13.63	□□□□□ -0.23
SREBF1-206	ENST00000423161	RORC	P51449	518 aa		13.63	□□□□□ -0.23
SREBF1-206	ENST00000423161	CMC4	P56277	68 aa	Predicted RBP	13.63	□□□□□ -0.23
SREBF1-206	ENST00000423161	RND3	P61587	244 aa		13.63	□□□□□ -0.23
SREBF1-206	ENST00000423161	RNASE10	Q5GAN6	216 aa	Known RBP	13.63	□□□□□ -0.23
SREBF1-206	ENST00000423161	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.63	□□□□□ -0.23
SREBF1-206	ENST00000423161	GBGT1	Q8N5D6	347 aa		13.63	□□□□□ -0.23
SREBF1-206	ENST00000423161	SLC35G3	Q8N808	338 aa		13.63	□□□□□ -0.23
SREBF1-206	ENST00000423161	ZNF486	Q96H40	463 aa	Predicted RBP	13.63	□□□□□ -0.23
SREBF1-206	ENST00000423161	GINS3	Q9BRX5	216 aa		13.63	□□□□□ -0.23
SREBF1-206	ENST00000423161	IGKV1-5	P01602	117 aa		13.62	□□□□□ -0.23
SREBF1-206	ENST00000423161	AKR1C2	P52895	323 aa		13.62	□□□□□ -0.23
SREBF1-206	ENST00000423161	PIGP	P57054	158 aa		13.62	□□□□□ -0.23
SREBF1-206	ENST00000423161	FAM90A2P	Q658T7	463 aa		13.62	□□□□□ -0.23
SREBF1-206	ENST00000423161	MZT2A	Q6P582	158 aa		13.62	□□□□□ -0.23
SREBF1-206	ENST00000423161	TMEM217	Q8N7C4	229 aa		13.62	□□□□□ -0.23
SREBF1-206	ENST00000423161	TP53RK	Q96S44	253 aa		13.62	□□□□□ -0.23
SREBF1-206	ENST00000423161	KLK11	Q9UBX7	282 aa		13.62	□□□□□ -0.23
SREBF1-206	ENST00000423161	SNCA	P37840	140 aa		13.61	□□□□□ -0.23
SREBF1-206	ENST00000423161	NPBWR1	P48145	328 aa		13.61	□□□□□ -0.23
SREBF1-206	ENST00000423161	TOMM20L	Q6UXN7	152 aa		13.61	□□□□□ -0.23
SREBF1-206	ENST00000423161	TCF24	Q7RTU0	167 aa		13.61	□□□□□ -0.23
SREBF1-206	ENST00000423161	LHFPL1	Q86WI0	220 aa		13.61	□□□□□ -0.23
SREBF1-206	ENST00000423161	ARRDC1	Q8N5I2	433 aa		13.61	□□□□□ -0.23
SREBF1-206	ENST00000423161	DUSP18	Q8NEJ0	188 aa		13.61	□□□□□ -0.23
SREBF1-206	ENST00000423161	CSTL1	Q9H114	145 aa		13.61	□□□□□ -0.23
SREBF1-206	ENST00000423161	KLK5	Q9Y337	293 aa	Predicted RBP	13.61	□□□□□ -0.23
SREBF1-206	ENST00000423161	MPTX1	A8MV57	137 aa		13.6	□□□□□ -0.23
SREBF1-206	ENST00000423161	ST8SIA3	O43173	380 aa		13.6	□□□□□ -0.23
SREBF1-206	ENST00000423161	IFNA17	P01571	189 aa		13.6	□□□□□ -0.23
SREBF1-206	ENST00000423161	CD3D	P04234	171 aa		13.6	□□□□□ -0.23
SREBF1-206	ENST00000423161		P0C879	139 aa		13.6	□□□□□ -0.23
SREBF1-206	ENST00000423161	PPP5C	P53041	499 aa		13.6	□□□□□ -0.23
SREBF1-206	ENST00000423161	PAFAH1B2	P68402	229 aa		13.6	□□□□□ -0.23
SREBF1-206	ENST00000423161	OR52I2	Q8NH67	350 aa		13.6	□□□□□ -0.23
SREBF1-206	ENST00000423161	ST8SIA2	Q92186	375 aa		13.6	□□□□□ -0.23
SREBF1-206	ENST00000423161		A0A0B4J293	547 aa		13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	C3orf85	A0A1B0GTC6	90 aa		13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	ATG12	O94817	140 aa		13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	CD5	P06127	495 aa		13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	ZNF600	Q6ZNG1	722 aa		13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	GATAD1	Q8WUU5	269 aa		13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	AP3S1	Q92572	193 aa		13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	PDCD10	Q9BUL8	212 aa		13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	VSIR	Q9H7M9	311 aa		13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	ZFAND3	Q9H8U3	227 aa		13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	EXTL2	Q9UBQ6	330 aa		13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	MTFP1	Q9UDX5	166 aa		13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	PUS1	Q9Y606	427 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
SREBF1-206	ENST00000423161	INS-IGF2	F8WCM5	200 aa		13.58	□□□□□ -0.24
SREBF1-206	ENST00000423161	APOH	P02749	345 aa	Predicted RBP	13.58	□□□□□ -0.24
SREBF1-206	ENST00000423161	TBP	P20226	339 aa		13.58	□□□□□ -0.24
SREBF1-206	ENST00000423161	HOXA1	P49639	335 aa	Predicted RBP	13.58	□□□□□ -0.24
SREBF1-206	ENST00000423161	TRIM16L	Q309B1	348 aa		13.58	□□□□□ -0.24
SREBF1-206	ENST00000423161	RARRES2	Q99969	163 aa		13.58	□□□□□ -0.24
SREBF1-206	ENST00000423161	NAA50	Q9GZZ1	169 aa	Known RBP	13.58	□□□□□ -0.24
SREBF1-206	ENST00000423161	COPZ2	Q9P299	210 aa		13.58	□□□□□ -0.24
SREBF1-206	ENST00000423161	AGRN	O00468	2067 aa		13.58	□□□□□ -0.24
SREBF1-206	ENST00000423161	IGHV3-66	A0A0C4DH42	116 aa		13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	DNASE2	O00115	360 aa	Predicted RBP	13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	CORT	O00230	105 aa		13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	TMEM50A	O95807	157 aa		13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	RNASE2	P10153	161 aa	Known RBP	13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	ZNF182	P17025	639 aa	Predicted RBP	13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	SUB1	P53999	127 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	SP6	Q3SY56	376 aa		13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	LILRB2	Q8N423	598 aa		13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	CCDC71L	Q8N9Z2	235 aa		13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	OR4D10	Q8NGI6	311 aa		13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	ZFAND1	Q8TCF1	268 aa		13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	MS4A6A	Q9H2W1	248 aa		13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161	ENY2	Q9NPA8	101 aa		13.57	□□□□□ -0.24
SREBF1-206	ENST00000423161		A0A1B0GU03	582 aa		13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161	DFFB	O76075	338 aa		13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161	GABARAP	O95166	117 aa		13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161	ETV6	P41212	452 aa		13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161	RPL11	P62913	178 aa	Known RBP	13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161	CTF1	Q16619	201 aa		13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161	SCGB2B2	Q4G0G5	96 aa		13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161	PVRIG	Q6DKI7	326 aa		13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161	OR13C8	Q8NGS7	320 aa		13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161	TERB2	Q8NHR7	220 aa		13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161	RNASE11	Q8TAA1	199 aa	Known RBP	13.56	□□□□□ -0.24
SREBF1-206	ENST00000423161	RRNAD1	Q96FB5	475 aa	Known RBP	13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms