RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 LOC100506127A0A0U1RQW1 187 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 ST8SIA3O43173 380 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 IGHV3-48P01763 117 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 PMP2P02689 132 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 NAT1P18440 290 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 TAS2R46P59540 309 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 DEFB131AP59861 70 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 TOMM20LQ6UXN7 152 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 Q8NAQ8 132 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 DUSP18Q8NEJ0 188 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 OR5H2Q8NGV7 314 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 OR6F1Q8NGZ6 308 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 ST8SIA2Q92186 375 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 S100A16Q96FQ6 103 aaKnown RBP12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 FXYD6Q9H0Q3 95 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 DNAH6Q9C0G6 4158 aa12.28□□□□□ -0.44
UPF3AP3-201ENST00000420996 VPS13DQ5THJ4 4388 aa12.27□□□□□ -0.44
UPF3AP3-201ENST00000420996 ATP6V1G2O95670 118 aa12.27□□□□□ -0.45
UPF3AP3-201ENST00000420996 PRCDQ00LT1 54 aa12.27□□□□□ -0.45
UPF3AP3-201ENST00000420996 LEMD1Q68G75 181 aa12.27□□□□□ -0.45
UPF3AP3-201ENST00000420996 LILRB2Q8N423 598 aa12.27□□□□□ -0.45
UPF3AP3-201ENST00000420996 OR4A16Q8NH70 328 aa12.27□□□□□ -0.45
UPF3AP3-201ENST00000420996 PINX1Q96BK5 328 aaKnown RBP12.27□□□□□ -0.45
UPF3AP3-201ENST00000420996 SEC22AQ96IW7 307 aa12.27□□□□□ -0.45
UPF3AP3-201ENST00000420996 YTHDF1Q9BYJ9 559 aaKnown RBP12.27□□□□□ -0.45
UPF3AP3-201ENST00000420996 APOHP02749 345 aaPredicted RBP12.26□□□□□ -0.45
UPF3AP3-201ENST00000420996 S100GP29377 79 aa12.26□□□□□ -0.45
UPF3AP3-201ENST00000420996 HSPE1P61604 102 aaKnown RBP12.26□□□□□ -0.45
UPF3AP3-201ENST00000420996 RPL11P62913 178 aaKnown RBP12.26□□□□□ -0.45
UPF3AP3-201ENST00000420996 ERHP84090 104 aaKnown RBP12.26□□□□□ -0.45
UPF3AP3-201ENST00000420996 PHLDA2Q53GA4 152 aa12.26□□□□□ -0.45
UPF3AP3-201ENST00000420996 H2BFWTQ7Z2G1 175 aa12.26□□□□□ -0.45
UPF3AP3-201ENST00000420996 STHQ8IWL8 128 aa12.26□□□□□ -0.45
UPF3AP3-201ENST00000420996 RBMY1A1P0DJD3 496 aaKnown RBP12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 RBMY1CP0DJD4 496 aa12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 NPBWR1P48145 328 aa12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 RBMY1FQ15415 496 aaKnown RBP12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 TMEM41BQ5BJD5 291 aa12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 LPCAT3Q6P1A2 487 aa12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 ZNF600Q6ZNG1 722 aa12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 LYSMD2Q8IV50 215 aa12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 FAM24BQ8N5W8 94 aa12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 TMEM231Q9H6L2 316 aa12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 ZFAND3Q9H8U3 227 aa12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 PUS1Q9Y606 427 aaKnown RBP eCLIP12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 KIAA1109Q2LD37 5005 aa12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 AGRNO00468 2067 aa12.25□□□□□ -0.45
UPF3AP3-201ENST00000420996 IGHV4-28A0A0C4DH34 117 aa12.24□□□□□ -0.45
UPF3AP3-201ENST00000420996 IGHV3-66A0A0C4DH42 116 aa12.24□□□□□ -0.45
UPF3AP3-201ENST00000420996 IGKV1-39P01597 117 aa12.24□□□□□ -0.45
UPF3AP3-201ENST00000420996 IGKV1D-39P04432 117 aa12.24□□□□□ -0.45
UPF3AP3-201ENST00000420996 GIG44P09565 113 aaPredicted RBP12.24□□□□□ -0.45
UPF3AP3-201ENST00000420996 MIFP14174 115 aa12.24□□□□□ -0.45
UPF3AP3-201ENST00000420996 HLA-DMBP28068 263 aa12.24□□□□□ -0.45
UPF3AP3-201ENST00000420996 TAS2R20P59543 309 aa12.24□□□□□ -0.45
UPF3AP3-201ENST00000420996 UBE2NLQ5JXB2 153 aa12.24□□□□□ -0.45
UPF3AP3-201ENST00000420996 TMEM69Q5SWH9 247 aa12.24□□□□□ -0.45
UPF3AP3-201ENST00000420996 LINC00336Q6ZUF6 198 aa12.24□□□□□ -0.45
UPF3AP3-201ENST00000420996 CROCCP3Q8IVE0 287 aa12.24□□□□□ -0.45
UPF3AP3-201ENST00000420996 TRAV10A0A0B4J240 114 aa12.23□□□□□ -0.45
UPF3AP3-201ENST00000420996 TMEM50AO95807 157 aa12.23□□□□□ -0.45
UPF3AP3-201ENST00000420996 PRSS3P35030 304 aa12.23□□□□□ -0.45
UPF3AP3-201ENST00000420996 HRH1P35367 487 aa12.23□□□□□ -0.45
UPF3AP3-201ENST00000420996 MORN3Q6PF18 240 aaPredicted RBP12.23□□□□□ -0.45
UPF3AP3-201ENST00000420996 TRPT1Q86TN4 253 aaKnown RBP12.23□□□□□ -0.45
UPF3AP3-201ENST00000420996 TBC1D26Q86UD7 250 aa12.23□□□□□ -0.45
UPF3AP3-201ENST00000420996 RABAC1Q9UI14 185 aa12.23□□□□□ -0.45
UPF3AP3-201ENST00000420996 A0A1B0GU03 582 aa12.22□□□□□ -0.45
UPF3AP3-201ENST00000420996 A0A1W2PS18 150 aa12.22□□□□□ -0.45
UPF3AP3-201ENST00000420996 ZNF705EA8MWA4 302 aaPredicted RBP12.22□□□□□ -0.45
UPF3AP3-201ENST00000420996 K7EQG2 157 aa12.22□□□□□ -0.45
UPF3AP3-201ENST00000420996 SPP1P10451 314 aa12.22□□□□□ -0.45
UPF3AP3-201ENST00000420996 NPPCP23582 126 aa12.22□□□□□ -0.45
UPF3AP3-201ENST00000420996 TSPAN5P62079 268 aa12.22□□□□□ -0.45
UPF3AP3-201ENST00000420996 CENPSQ8N2Z9 138 aa12.22□□□□□ -0.45
UPF3AP3-201ENST00000420996 MRGPRFQ96AM1 343 aa12.22□□□□□ -0.45
UPF3AP3-201ENST00000420996 GRAMD2BQ96HH9 432 aa12.22□□□□□ -0.45
UPF3AP3-201ENST00000420996 IGHV4-4A0A075B6R2 117 aa12.21□□□□□ -0.45
UPF3AP3-201ENST00000420996 HLA-DMAP28067 261 aa12.21□□□□□ -0.45
UPF3AP3-201ENST00000420996 SNCAP37840 140 aa12.21□□□□□ -0.45
UPF3AP3-201ENST00000420996 UCP3P55916 312 aa12.21□□□□□ -0.45
UPF3AP3-201ENST00000420996 Q6ZTC4 211 aa12.21□□□□□ -0.45
UPF3AP3-201ENST00000420996 SAMD12Q8N8I0 201 aa12.21□□□□□ -0.45
UPF3AP3-201ENST00000420996 Q9H521 79 aa12.21□□□□□ -0.45
UPF3AP3-201ENST00000420996 X6R8D5 127 aa12.21□□□□□ -0.45
UPF3AP3-201ENST00000420996 ELOA3CA0A087WX78 387 aaPredicted RBP12.2□□□□□ -0.46
UPF3AP3-201ENST00000420996 INS-IGF2F8WCM5 200 aa12.2□□□□□ -0.46
UPF3AP3-201ENST00000420996 PVRIGQ6DKI7 326 aa12.2□□□□□ -0.46
UPF3AP3-201ENST00000420996 STXBP6Q8NFX7 210 aa12.2□□□□□ -0.46
UPF3AP3-201ENST00000420996 RNF126Q9BV68 326 aa12.2□□□□□ -0.46
UPF3AP3-201ENST00000420996 CORTO00230 105 aa12.19□□□□□ -0.46
UPF3AP3-201ENST00000420996 C4BPBP20851 252 aa12.19□□□□□ -0.46
UPF3AP3-201ENST00000420996 CRYBB3P26998 211 aa12.19□□□□□ -0.46
UPF3AP3-201ENST00000420996 SUB1P53999 127 aaKnown RBP eCLIP12.19□□□□□ -0.46
UPF3AP3-201ENST00000420996 IZUMO4Q1ZYL8 232 aa12.19□□□□□ -0.46
UPF3AP3-201ENST00000420996 SPINK9Q5DT21 86 aa12.19□□□□□ -0.46
UPF3AP3-201ENST00000420996 GPX8Q8TED1 209 aa12.19□□□□□ -0.46
UPF3AP3-201ENST00000420996 METTL26Q96S19 204 aa12.19□□□□□ -0.46
UPF3AP3-201ENST00000420996 A0A1B0GVY2 172 aa12.18□□□□□ -0.46
UPF3AP3-201ENST00000420996 KNCNA6PVL3 124 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 155.5 ms