RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TDRD6O60522 2096 aaKnown RBP10.09□□□□□ -0.79
UBR4-205ENST00000417040 SAA2-SAA4A0A096LPE2 208 aa10.09□□□□□ -0.79
UBR4-205ENST00000417040 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.09□□□□□ -0.79
UBR4-205ENST00000417040 HOXA3O43365 443 aaPredicted RBP10.09□□□□□ -0.79
UBR4-205ENST00000417040 SAA2P0DJI9 122 aaPredicted RBP10.09□□□□□ -0.79
UBR4-205ENST00000417040 RAX2Q96IS3 184 aa10.09□□□□□ -0.79
UBR4-205ENST00000417040 SBF2Q86WG5 1849 aa10.09□□□□□ -0.79
UBR4-205ENST00000417040 ADAMTS7Q9UKP4 1686 aa10.09□□□□□ -0.79
UBR4-205ENST00000417040 FBXL7Q9UJT9 491 aa10.09□□□□□ -0.79
UBR4-205ENST00000417040 TNFRSF18Q9Y5U5 241 aa10.09□□□□□ -0.79
UBR4-205ENST00000417040 AHRRA9YTQ3 701 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 ATP5LO75964 103 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 TRGV3P03979 118 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 TIMP3P35625 211 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 FAM106AQ4KMX7 169 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 ORAOV1Q8WV07 137 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 C1orf122Q6ZSJ8 110 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 ASCL2Q99929 193 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 COX5BP10606 129 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 ZNF585BQ52M93 769 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 OR10J3Q5JRS4 329 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 SAMD5Q5TGI4 173 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 PGPEP1Q9NXJ5 209 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 A0A087X0K7 114 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 LYPD3O95274 346 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 TSPAN7P41732 249 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 FAM27E3Q08E93 113 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 RIPPLY2Q5TAB7 128 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 C1orf53Q5VUE5 145 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 C1orf174Q8IYL3 243 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 SHISA5Q8N114 240 aa10.08□□□□□ -0.8
UBR4-205ENST00000417040 A0A0U1RRA0 63 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 COL11A2P13942 1736 aaPredicted RBP10.07□□□□□ -0.8
UBR4-205ENST00000417040 SRSF4Q08170 494 aaKnown RBP10.07□□□□□ -0.8
UBR4-205ENST00000417040 LCN12Q6JVE5 192 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 GTSCR1Q86UQ5 136 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 TRAV8-4A0A0B4J246 113 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 PYY3Q5JQD4 70 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 SAP25Q8TEE9 199 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 CHD5Q8TDI0 1954 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 CECR9P0C854 216 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 GAS1P54826 345 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 RNF144BQ7Z419 303 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 TEX29Q8N6K0 151 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 CCL3L1P16619 93 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 PAX2Q02962 417 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 OR10W1Q8NGF6 305 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 MESP1Q9BRJ9 268 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 EFNB3Q15768 340 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 TIMM23BQ5SRD1 257 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 C1QTNF5Q9BXJ0 243 aa10.07□□□□□ -0.8
UBR4-205ENST00000417040 TNFSF13O75888 250 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 TMEM155Q4W5P6 130 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 DLEU1O43261 78 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 PSG7Q13046 419 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 COPS9Q8WXC6 57 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 DPH3Q96FX2 82 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 GP6Q9HCN6 339 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 TRBV6-7A0A0A0MS04 114 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 PRTN3P24158 256 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 CLEC2AQ6UVW9 174 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 GNB1LQ9BYB4 327 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 NPFFR1Q9GZQ6 430 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 EPDR1Q9UM22 224 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 TRAV9-1A0A075B6T8 112 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 TRBV7-9A0A0J9YWB2 115 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 ADCYAP1P18509 176 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 FGFBP3Q8TAT2 258 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 DUX3Q96PT4 197 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 CHTOPQ9Y3Y2 248 aaKnown RBP10.06□□□□□ -0.8
UBR4-205ENST00000417040 KBTBD11-OT1A0A1B0GTJ5 212 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 NCR2O95944 276 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 IGHV3-11P01762 117 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 IGKCP01834 107 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 PSG1P11464 419 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 IGHV1-2P23083 117 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 SNRPD3P62318 126 aaKnown RBP10.06□□□□□ -0.8
UBR4-205ENST00000417040 TEX38Q6PEX7 206 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 LCNL1Q6ZST4 164 aa10.06□□□□□ -0.8
UBR4-205ENST00000417040 PATJQ8NI35 1801 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 SRD5A1P18405 259 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 TPTE2P1Q5T6R2 138 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 MDC1Q14676 2089 aaKnown RBP10.05□□□□□ -0.8
UBR4-205ENST00000417040 C2orf88Q9BSF0 95 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 SEMA5BQ9P283 1151 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 PILRBQ9UKJ0 227 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 MRPS16Q9Y3D3 137 aaKnown RBP10.05□□□□□ -0.8
UBR4-205ENST00000417040 COL5A3P25940 1745 aaPredicted RBP10.05□□□□□ -0.8
UBR4-205ENST00000417040 UBR3Q6ZT12 1888 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 LURAP1LQ8IV03 231 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 ITLN2Q8WWU7 325 aaPredicted RBP10.05□□□□□ -0.8
UBR4-205ENST00000417040 DNM1P46Q6ZS02 220 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 CENPVQ7Z7K6 275 aaPredicted RBP10.05□□□□□ -0.8
UBR4-205ENST00000417040 ZNF664Q8N3J9 261 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 DPM2O94777 84 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 PDLIM4P50479 330 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 SP7Q8TDD2 431 aaPredicted RBP10.05□□□□□ -0.8
UBR4-205ENST00000417040 OTORQ9NRC9 128 aa10.05□□□□□ -0.8
UBR4-205ENST00000417040 MYOFQ9NZM1 2061 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 FTH1P19P0C7X4 201 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms