RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 Q6ZRM9 215 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 OR51S1Q8NGJ8 323 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 MCFD2Q8NI22 146 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 LHFPL5Q8TAF8 219 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 GLYATL2Q8WU03 294 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 TMEM222Q9H0R3 208 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 GPR132Q9UNW8 380 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 CSMD3Q7Z407 3707 aa13.27□□□□□ -0.29
LSM5-204ENST00000409909 C3orf84H3BNL1 204 aa13.26□□□□□ -0.29
LSM5-204ENST00000409909 B3GALNT1O75752 331 aa13.26□□□□□ -0.29
LSM5-204ENST00000409909 ATG12O94817 140 aa13.26□□□□□ -0.29
LSM5-204ENST00000409909 CDS2O95674 445 aa13.26□□□□□ -0.29
LSM5-204ENST00000409909 MT-CO2P00403 227 aa13.26□□□□□ -0.29
LSM5-204ENST00000409909 OR5AC1P0C628 307 aa13.26□□□□□ -0.29
LSM5-204ENST00000409909 ETV6P41212 452 aa13.26□□□□□ -0.29
LSM5-204ENST00000409909 SURF2Q15527 256 aaPredicted RBP13.26□□□□□ -0.29
LSM5-204ENST00000409909 CITED4Q96RK1 184 aa13.26□□□□□ -0.29
LSM5-204ENST00000409909 SPATA25Q9BR10 227 aa13.26□□□□□ -0.29
LSM5-204ENST00000409909 NAA60Q9H7X0 242 aa13.26□□□□□ -0.29
LSM5-204ENST00000409909 SRD5A3Q9H8P0 318 aa13.26□□□□□ -0.29
LSM5-204ENST00000409909 DAZ1Q9NQZ3 744 aaKnown RBP13.26□□□□□ -0.29
LSM5-204ENST00000409909 RSL24D1Q9UHA3 163 aaKnown RBP13.26□□□□□ -0.29
LSM5-204ENST00000409909 C14orf166Q9Y224 244 aaKnown RBP13.26□□□□□ -0.29
LSM5-204ENST00000409909 TRAV25A0A0B4J276 109 aa13.25□□□□□ -0.29
LSM5-204ENST00000409909 TEX13DA0A0J9YY54 714 aaPredicted RBP13.25□□□□□ -0.29
LSM5-204ENST00000409909 FABP12A6NFH5 140 aa13.25□□□□□ -0.29
LSM5-204ENST00000409909 INS-IGF2F8WCM5 200 aa13.25□□□□□ -0.29
LSM5-204ENST00000409909 ZNF207O43670 478 aaKnown RBP13.25□□□□□ -0.29
LSM5-204ENST00000409909 IFNA17P01571 189 aa13.25□□□□□ -0.29
LSM5-204ENST00000409909 FCGR2BP31994 310 aaPredicted RBP13.25□□□□□ -0.29
LSM5-204ENST00000409909 MFAP4P55083 255 aa13.25□□□□□ -0.29
LSM5-204ENST00000409909 SLC35G3Q8N808 338 aa13.25□□□□□ -0.29
LSM5-204ENST00000409909 MUC7Q8TAX7 377 aa13.25□□□□□ -0.29
LSM5-204ENST00000409909 PINX1Q96BK5 328 aaKnown RBP13.25□□□□□ -0.29
LSM5-204ENST00000409909 RRNAD1Q96FB5 475 aaKnown RBP13.25□□□□□ -0.29
LSM5-204ENST00000409909 TXN2Q99757 166 aa13.25□□□□□ -0.29
LSM5-204ENST00000409909 PRRT1Q99946 306 aa13.25□□□□□ -0.29
LSM5-204ENST00000409909 C20orf24Q9BUV8 137 aa13.25□□□□□ -0.29
LSM5-204ENST00000409909 CRYM-AS1A6NIL9 109 aa13.24□□□□□ -0.29
LSM5-204ENST00000409909 K7EMT4 169 aa13.24□□□□□ -0.29
LSM5-204ENST00000409909 PVRIGQ6DKI7 326 aa13.24□□□□□ -0.29
LSM5-204ENST00000409909 RBPMS2Q6ZRY4 209 aaKnown RBP13.24□□□□□ -0.29
LSM5-204ENST00000409909 SLC16A13Q7RTY0 426 aa13.24□□□□□ -0.29
LSM5-204ENST00000409909 SELENOHQ8IZQ5 122 aaKnown RBP13.24□□□□□ -0.29
LSM5-204ENST00000409909 OR52B4Q8NGK2 314 aa13.24□□□□□ -0.29
LSM5-204ENST00000409909 HIPK2Q9H2X6 1198 aa13.24□□□□□ -0.29
LSM5-204ENST00000409909 EDA2RQ9HAV5 297 aa13.24□□□□□ -0.29
LSM5-204ENST00000409909 RETNQ9HD89 108 aa13.24□□□□□ -0.29
LSM5-204ENST00000409909 GAR1Q9NY12 217 aaKnown RBP13.24□□□□□ -0.29
LSM5-204ENST00000409909 C15orf62A8K5M9 175 aa13.23□□□□□ -0.29
LSM5-204ENST00000409909 RNASE2P10153 161 aaKnown RBP13.23□□□□□ -0.29
LSM5-204ENST00000409909 SNCAP37840 140 aa13.23□□□□□ -0.29
LSM5-204ENST00000409909 AARDQ4LEZ3 155 aa13.23□□□□□ -0.29
LSM5-204ENST00000409909 TMEM230Q96A57 120 aa13.23□□□□□ -0.29
LSM5-204ENST00000409909 TENM2Q9NT68 2774 aa13.23□□□□□ -0.29
LSM5-204ENST00000409909 STARD9Q9P2P6 4700 aa13.23□□□□□ -0.29
LSM5-204ENST00000409909 NUPL2O15504 423 aaKnown RBP13.22□□□□□ -0.29
LSM5-204ENST00000409909 DHODHQ02127 395 aa13.22□□□□□ -0.29
LSM5-204ENST00000409909 RELQ04864 619 aaPredicted RBP13.22□□□□□ -0.29
LSM5-204ENST00000409909 ANKRD55Q3KP44 614 aa13.22□□□□□ -0.29
LSM5-204ENST00000409909 CASC10Q5T4H9 136 aa13.22□□□□□ -0.29
LSM5-204ENST00000409909 FAM219AQ8IW50 185 aa13.22□□□□□ -0.29
LSM5-204ENST00000409909 RNASE11Q8TAA1 199 aaKnown RBP13.22□□□□□ -0.29
LSM5-204ENST00000409909 RBPMSQ93062 196 aaKnown RBP13.22□□□□□ -0.29
LSM5-204ENST00000409909 GPR146Q96CH1 333 aa13.22□□□□□ -0.29
LSM5-204ENST00000409909 OR10C1Q96KK4 312 aa13.22□□□□□ -0.29
LSM5-204ENST00000409909 PDCD10Q9BUL8 212 aa13.22□□□□□ -0.29
LSM5-204ENST00000409909 TSPAN4O14817 238 aa13.21□□□□□ -0.29
LSM5-204ENST00000409909 HOXA1P49639 335 aaPredicted RBP13.21□□□□□ -0.29
LSM5-204ENST00000409909 TMEM268Q5VZI3 342 aa13.21□□□□□ -0.29
LSM5-204ENST00000409909 SPAG8Q99932 426 aaPredicted RBP13.21□□□□□ -0.29
LSM5-204ENST00000409909 RBM38Q9H0Z9 239 aaKnown RBP13.21□□□□□ -0.29
LSM5-204ENST00000409909 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.21□□□□□ -0.29
LSM5-204ENST00000409909 MCUBQ9NWR8 336 aa13.21□□□□□ -0.29
LSM5-204ENST00000409909 PRR13Q9NZ81 148 aa13.21□□□□□ -0.29
LSM5-204ENST00000409909 SMPXQ9UHP9 88 aa13.21□□□□□ -0.29
LSM5-204ENST00000409909 SCP2D1Q9UJQ7 156 aa13.21□□□□□ -0.29
LSM5-204ENST00000409909 TMEM56-RWDD3S4R434 201 aa13.21□□□□□ -0.29
LSM5-204ENST00000409909 V9GYH0 126 aa13.21□□□□□ -0.29
LSM5-204ENST00000409909 DYNC2H1Q8NCM8 4307 aaKnown RBP13.21□□□□□ -0.3
LSM5-204ENST00000409909 CCDC160A6NGH7 325 aa13.2□□□□□ -0.3
LSM5-204ENST00000409909 GNG7O60262 68 aa13.2□□□□□ -0.3
LSM5-204ENST00000409909 YIF1AO95070 293 aa13.2□□□□□ -0.3
LSM5-204ENST00000409909 LYL1P12980 280 aa13.2□□□□□ -0.3
LSM5-204ENST00000409909 SPCS3P61009 180 aa13.2□□□□□ -0.3
LSM5-204ENST00000409909 TMEM187Q14656 261 aa13.2□□□□□ -0.3
LSM5-204ENST00000409909 MLANAQ16655 118 aa13.2□□□□□ -0.3
LSM5-204ENST00000409909 BSXQ3C1V8 233 aa13.2□□□□□ -0.3
LSM5-204ENST00000409909 TRIM63Q969Q1 353 aa13.2□□□□□ -0.3
LSM5-204ENST00000409909 FAM110AQ9BQ89 295 aa13.2□□□□□ -0.3
LSM5-204ENST00000409909 FNDC4Q9H6D8 234 aaPredicted RBP13.2□□□□□ -0.3
LSM5-204ENST00000409909 MRPL36Q9P0J6 103 aaKnown RBP13.2□□□□□ -0.3
LSM5-204ENST00000409909 CACNG5Q9UF02 275 aa13.2□□□□□ -0.3
LSM5-204ENST00000409909 IGHV3-49A0A0A0MS15 119 aa13.19□□□□□ -0.3
LSM5-204ENST00000409909 IGHV7-4-1A0A0J9YVY3 117 aa13.19□□□□□ -0.3
LSM5-204ENST00000409909 CHEK1O14757 476 aa13.19□□□□□ -0.3
LSM5-204ENST00000409909 SUB1P53999 127 aaKnown RBP eCLIP13.19□□□□□ -0.32e-7■■■■□ 24.9
LSM5-204ENST00000409909 SUPT4H1P63272 117 aaKnown RBP13.19□□□□□ -0.3
LSM5-204ENST00000409909 KLF9Q13886 244 aaPredicted RBP13.19□□□□□ -0.3
LSM5-204ENST00000409909 ZNF79Q15937 498 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms