RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 SLC35E1Q96K37 410 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 NIPSNAP3BQ9BS92 247 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 TUBA4BQ9H853 241 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 SLC25A22Q9H936 323 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 RPS10P5Q9NQ39 176 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 SMCO4Q9NRQ5 59 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 METTL1Q9UBP6 276 aaKnown RBP5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 SLC45A2Q9UMX9 530 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 KMT2BQ9UMN6 2715 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 IGHV2-70DA0A0C4DH43 119 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 C7orf77A4D0Y5 90 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 CGB1A6NKQ9 187 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 FAM74A7A6NL05 159 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 TMEM250H0YL14 139 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 H3BQ15 152 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 YIF1AO95070 293 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 VENTXO95231 258 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 MOSP00540 346 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 IGHV4-39P01824 125 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 LINC00869P0C866 280 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 UBE2E1P51965 193 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 RHOBP62745 196 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 MEF2BQ02080 365 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 PRB3Q04118 309 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 PLGLAQ15195 96 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 TNXAQ16473 311 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 MRGPRG-AS1Q2M3A8 158 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 FAM74A3Q4VXF1 159 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 PVRIGQ6DKI7 326 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 HCP5Q6MZN7 132 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 VMO1Q7Z5L0 202 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 STPG3Q8N7X2 389 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 CYB561D1Q8N8Q1 229 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 ZNF114Q8NC26 417 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 NPBQ8NG41 125 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 OR2T10Q8NGZ9 312 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 SSMEM1Q8WWF3 244 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 MALSU1Q96EH3 234 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 TVP23CQ96ET8 276 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 CCL19Q99731 98 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 TXNDC17Q9BRA2 123 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 BPESC1Q9GZL8 116 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 SIRPDQ9H106 197 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 LPAR2Q9HBW0 351 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 POLR3KQ9Y2Y1 108 aaPredicted RBP5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 HILPDAQ9Y5L2 63 aa5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 PUS1Q9Y606 427 aaKnown RBP eCLIP5.03□□□□□ -1.6
GTF3C3-202ENST00000409364 IGLC7A0M8Q6 106 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 B4DEV8 164 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 CORTO00230 105 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 HMGB3O15347 200 aaKnown RBP5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 NBR2O15453 112 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 TOX4O94842 621 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 CXorf1O96002 111 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 FBP1P09467 338 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 STAG3L2P0CL84 134 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 STAG3L3P0CL85 134 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 CNTFRP26992 372 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 OR10J1P30954 320 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 CEBPGP53567 150 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 SELENOTP62341 195 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 LCN2P80188 198 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 PNRC1Q12796 327 aaPredicted RBP5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 SSX2Q16385 188 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 MLANAQ16655 118 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 AWAT1Q58HT5 328 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 C10orf55Q5SWW7 151 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 LDLRAD2Q5SZI1 272 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 LCE4AQ5TA78 99 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 TMEM88Q6PEY1 159 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 SLC16A13Q7RTY0 426 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 OR1L6Q8NGR2 347 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 OR1P1Q8NH06 330 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 CFHR4Q92496 578 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 FAM168AQ92567 244 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 RNF2Q99496 336 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 PIMREGQ9BSJ6 248 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 TMPRSS5Q9H3S3 457 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 FBXL15Q9H469 300 aa5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 TBL2Q9Y4P3 447 aaKnown RBP5.02□□□□□ -1.61
GTF3C3-202ENST00000409364 TNCP24821 2201 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 A0A087WWC5 75 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 FCN1O00602 326 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 PDE6DO43924 150 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 PAGE4O60829 102 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 CLN5O75503 358 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 NDUFA3O95167 84 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 CNIH1O95406 144 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 FAM106CPP0CH98 169 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 HOXB4P17483 251 aaPredicted RBP5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 PAX6P26367 422 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 DSCR9P59020 149 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 CD81P60033 236 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 GNB1P62873 340 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 KLRD1Q13241 179 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 EBI3Q14213 229 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 HES1Q14469 280 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 MMDQ15546 238 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 AKIRIN2Q53H80 203 aa5.01□□□□□ -1.61
GTF3C3-202ENST00000409364 GCSAMLQ5JQS6 135 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms