RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 MARCH11A6NNE9 402 aa8.44□□□□□ -1.06
SPTLC1P3-201ENST00000403408 PSMA1P25786 263 aaKnown RBP8.44□□□□□ -1.06
SPTLC1P3-201ENST00000403408 G6PCP35575 357 aa8.44□□□□□ -1.06
SPTLC1P3-201ENST00000403408 FXYD4P59646 89 aa8.44□□□□□ -1.06
SPTLC1P3-201ENST00000403408 C10orf67Q8IYJ2 551 aa8.44□□□□□ -1.06
SPTLC1P3-201ENST00000403408 ZBTB34Q8NCN2 500 aa8.44□□□□□ -1.06
SPTLC1P3-201ENST00000403408 DUSP18Q8NEJ0 188 aa8.44□□□□□ -1.06
SPTLC1P3-201ENST00000403408 FCAMRQ8WWV6 532 aa8.44□□□□□ -1.06
SPTLC1P3-201ENST00000403408 MGLLQ99685 303 aa8.44□□□□□ -1.06
SPTLC1P3-201ENST00000403408 COMMD9Q9P000 198 aa8.44□□□□□ -1.06
SPTLC1P3-201ENST00000403408 MRPL36Q9P0J6 103 aaKnown RBP8.44□□□□□ -1.06
SPTLC1P3-201ENST00000403408 PUS1Q9Y606 427 aaKnown RBP eCLIP8.44□□□□□ -1.06
SPTLC1P3-201ENST00000403408 CYB5BO43169 146 aa8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 KRASP01116 189 aa8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 RAB3BP20337 219 aa8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 PPP5CP53041 499 aa8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 GNG2P59768 71 aa8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 RPL11P62913 178 aaKnown RBP8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 TMEM41BQ5BJD5 291 aa8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 OGFRL1Q5TC84 451 aaPredicted RBP8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 AADACL3Q5VUY0 350 aa8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 UBE2DNLQ8IWF7 75 aa8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 BEST4Q8NFU0 473 aa8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 RAB40CQ96S21 281 aa8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 TXN2Q99757 166 aa8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 ACOT13Q9NPJ3 140 aa8.43□□□□□ -1.06
SPTLC1P3-201ENST00000403408 PDCD5O14737 125 aa8.42□□□□□ -1.06
SPTLC1P3-201ENST00000403408 PGLYRP1O75594 196 aaPredicted RBP8.42□□□□□ -1.06
SPTLC1P3-201ENST00000403408 IFNA21P01568 189 aa8.42□□□□□ -1.06
SPTLC1P3-201ENST00000403408 IFNA17P01571 189 aa8.42□□□□□ -1.06
SPTLC1P3-201ENST00000403408 LPAR6P43657 344 aa8.42□□□□□ -1.06
SPTLC1P3-201ENST00000403408 CATR1Q13166 79 aa8.42□□□□□ -1.06
SPTLC1P3-201ENST00000403408 TMEM17Q86X19 198 aa8.42□□□□□ -1.06
SPTLC1P3-201ENST00000403408 HOGA1Q86XE5 327 aa8.42□□□□□ -1.06
SPTLC1P3-201ENST00000403408 STXBP6Q8NFX7 210 aa8.42□□□□□ -1.06
SPTLC1P3-201ENST00000403408 GRAMD2BQ96HH9 432 aa8.42□□□□□ -1.06
SPTLC1P3-201ENST00000403408 XCL2Q9UBD3 114 aa8.42□□□□□ -1.06
SPTLC1P3-201ENST00000403408 IGKV1-39P01597 117 aa8.41□□□□□ -1.06
SPTLC1P3-201ENST00000403408 IGKV1D-39P04432 117 aa8.41□□□□□ -1.06
SPTLC1P3-201ENST00000403408 RLN1P04808 185 aa8.41□□□□□ -1.06
SPTLC1P3-201ENST00000403408 F2RP25116 425 aa8.41□□□□□ -1.06
SPTLC1P3-201ENST00000403408 DEFB1P60022 68 aa8.41□□□□□ -1.06
SPTLC1P3-201ENST00000403408 ARL6IP1Q15041 203 aa8.41□□□□□ -1.06
SPTLC1P3-201ENST00000403408 RNF212Q495C1 297 aa8.41□□□□□ -1.06
SPTLC1P3-201ENST00000403408 SOHLH1Q5JUK2 328 aa8.41□□□□□ -1.06
SPTLC1P3-201ENST00000403408 ZNF705AQ6ZN79 300 aaPredicted RBP8.41□□□□□ -1.06
SPTLC1P3-201ENST00000403408 CADM3Q8N126 398 aa8.41□□□□□ -1.06
SPTLC1P3-201ENST00000403408 PINX1Q96BK5 328 aaKnown RBP8.41□□□□□ -1.06
SPTLC1P3-201ENST00000403408 C8orf4Q9NR00 106 aa8.41□□□□□ -1.06
SPTLC1P3-201ENST00000403408 ZNF705FA8MVS1 300 aaPredicted RBP8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 RGS10O43665 173 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 GNG7O60262 68 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 TMEM50AO95807 157 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 CD5P06127 495 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 ZNF705DP0CH99 300 aaPredicted RBP8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 ZNF705BP0CI00 300 aaPredicted RBP8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 CRYBB3P26998 211 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 P2RY1P47900 373 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 EMP1P54849 157 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 ARPC4P59998 168 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 KRTAP10-2P60368 255 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 MLANAQ16655 118 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 SPINK9Q5DT21 86 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 C22orf42Q6IC83 251 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 ZNF600Q6ZNG1 722 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 ZNF114Q8NC26 417 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 OR5H6Q8NGV6 325 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 LGALS14Q8TCE9 139 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 SLC25A38Q96DW6 304 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 GINS3Q9BRX5 216 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 DKK2Q9UBU2 259 aa8.4□□□□□ -1.06
SPTLC1P3-201ENST00000403408 TRDV1A0A1B0GX56 115 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 H3BMM0 161 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 CASQ2O14958 399 aaPredicted RBP8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 EIF4EP06730 217 aaKnown RBP8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 NPY1RP25929 384 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 RANBP1P43487 201 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 ERVK-16P61578 105 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 RCN1Q15293 331 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 IZUMO4Q1ZYL8 232 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 PSMG4Q5JS54 123 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 FAM222AQ5U5X8 452 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 TMEM88Q6PEY1 159 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 ZNF367Q7RTV3 350 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 CENPSQ8N2Z9 138 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 TMEM56Q96MV1 263 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 FNDC4Q9H6D8 234 aaPredicted RBP8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 SCN3BQ9NY72 215 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 PRNDQ9UKY0 176 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 U3KQE9 123 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 DNAH8Q96JB1 4490 aa8.39□□□□□ -1.07
SPTLC1P3-201ENST00000403408 HMCN2Q8NDA2 5059 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 TRAV18A0A075B6X5 111 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 MEIS3P1A6NDR6 274 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 NOTOA8MTQ0 251 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 SNAPC5O75971 98 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 SPART-AS1P0CW21 52 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 MYL9P24844 172 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 FXYD7P58549 80 aa8.38□□□□□ -1.07
SPTLC1P3-201ENST00000403408 PRCDQ00LT1 54 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms