RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 NTF4P34130 210 aa13.68□□□□□ -0.22
SCN3B-202ENST00000392770 ZNF841Q6ZN19 808 aa13.68□□□□□ -0.22
SCN3B-202ENST00000392770 IGHV3OR16-12A0A075B7B8 117 aa13.68□□□□□ -0.22
SCN3B-202ENST00000392770 DIRC3C9JPN6 131 aa13.68□□□□□ -0.22
SCN3B-202ENST00000392770 TDGF1P13385 188 aa13.68□□□□□ -0.22
SCN3B-202ENST00000392770 Q6ZS49 121 aa13.68□□□□□ -0.22
SCN3B-202ENST00000392770 GTF2H5Q6ZYL4 71 aa13.68□□□□□ -0.22
SCN3B-202ENST00000392770 NEU1Q99519 415 aa13.68□□□□□ -0.22
SCN3B-202ENST00000392770 PI4KAP42356 2102 aa13.68□□□□□ -0.22
SCN3B-202ENST00000392770 TNFSF13O75888 250 aa13.68□□□□□ -0.22
SCN3B-202ENST00000392770 IGKV1-5P01602 117 aa13.68□□□□□ -0.22
SCN3B-202ENST00000392770 VSIRQ9H7M9 311 aa13.68□□□□□ -0.22
SCN3B-202ENST00000392770 HIST1H1AQ02539 215 aaPredicted RBP13.68□□□□□ -0.22
SCN3B-202ENST00000392770 A0A0G2JLM5 398 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 NMSQ5H8A3 153 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 LYPD2Q6UXB3 125 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 HSPB9Q9BQS6 159 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 PHLDA3Q9Y5J5 127 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 E7EQL1 145 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 FGF16O43320 207 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 COL8A2P25067 703 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 SNRPD3P62318 126 aaKnown RBP13.67□□□□□ -0.22
SCN3B-202ENST00000392770 HERPUD1Q15011 391 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 FMC1Q96HJ9 113 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 CYTL1Q9NRR1 136 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 Q9H3A6 140 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 LRRK1Q38SD2 2015 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 CRIM1Q9NZV1 1036 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 COL4A4P53420 1690 aaPredicted RBP13.67□□□□□ -0.22
SCN3B-202ENST00000392770 TCRBV4S1A1TA0A5B7 111 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 SLC25A48Q6ZT89 311 aaKnown RBP13.67□□□□□ -0.22
SCN3B-202ENST00000392770 CDC42EP3Q9UKI2 254 aa13.67□□□□□ -0.22
SCN3B-202ENST00000392770 TRAV3A0A0B4J244 114 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 TRAV40A0A0B4J280 105 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 IGHV1-3A0A0C4DH29 117 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 LINC00473A8K010 186 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 SLC17A3O00476 420 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 SRIP30626 198 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 CD69Q07108 199 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 RAX2Q96IS3 184 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 TP53BP1Q12888 1972 aaPredicted RBP13.66□□□□□ -0.22
SCN3B-202ENST00000392770 ZNF106Q9H2Y7 1883 aaKnown RBP13.66□□□□□ -0.22
SCN3B-202ENST00000392770 A0A087X0M5 115 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 A0A1B0GX30 115 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 IGHV3-11P01762 117 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 RELBQ01201 579 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 SAPCD1Q5SSQ6 148 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 TBX15Q96SF7 602 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 TRGC1P0CF51 173 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 KIAA1644Q3SXP7 199 aa13.66□□□□□ -0.22
SCN3B-202ENST00000392770 TRBV9A0A0B4J1U6 114 aa13.65□□□□□ -0.22
SCN3B-202ENST00000392770 GCSAMLQ5JQS6 135 aa13.65□□□□□ -0.22
SCN3B-202ENST00000392770 PAM16Q9Y3D7 125 aa13.65□□□□□ -0.22
SCN3B-202ENST00000392770 BTF3P20290 206 aaKnown RBP13.65□□□□□ -0.22
SCN3B-202ENST00000392770 HERVK_113P61574 105 aa13.65□□□□□ -0.22
SCN3B-202ENST00000392770 SMUG1Q53HV7 270 aa13.65□□□□□ -0.22
SCN3B-202ENST00000392770 TPTE2P1Q5T6R2 138 aa13.65□□□□□ -0.22
SCN3B-202ENST00000392770 SDF2L1Q9HCN8 221 aa13.65□□□□□ -0.22
SCN3B-202ENST00000392770 LEMD1Q68G75 181 aa13.65□□□□□ -0.22
SCN3B-202ENST00000392770 IGKV3-20P01619 116 aa13.65□□□□□ -0.22
SCN3B-202ENST00000392770 IL36BQ9NZH7 164 aa13.65□□□□□ -0.22
SCN3B-202ENST00000392770 H0YJW9 148 aa13.64□□□□□ -0.23
SCN3B-202ENST00000392770 LINC00205P59089 165 aa13.64□□□□□ -0.23
SCN3B-202ENST00000392770 YAE1D1Q9NRH1 226 aa13.64□□□□□ -0.23
SCN3B-202ENST00000392770 J3QR89 54 aa13.64□□□□□ -0.23
SCN3B-202ENST00000392770 C10orf55Q5SWW7 151 aa13.64□□□□□ -0.23
SCN3B-202ENST00000392770 PVRIGQ6DKI7 326 aa13.64□□□□□ -0.23
SCN3B-202ENST00000392770 PKIAP61925 76 aa13.64□□□□□ -0.23
SCN3B-202ENST00000392770 GNG5P63218 68 aa13.64□□□□□ -0.23
SCN3B-202ENST00000392770 ZNF257Q9Y2Q1 563 aa13.64□□□□□ -0.23
SCN3B-202ENST00000392770 GRIFINA4D1Z8 144 aa13.64□□□□□ -0.23
SCN3B-202ENST00000392770 CCL20P78556 96 aa13.64□□□□□ -0.23
SCN3B-202ENST00000392770 TSPOP30536 169 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 C3orf36Q3SXR2 165 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 TREML4Q6UXN2 200 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 COL4A3Q01955 1670 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 EFNB3Q15768 340 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 FAM53AQ6NSI3 398 aaPredicted RBP13.63□□□□□ -0.23
SCN3B-202ENST00000392770 ATRAIDQ6UW56 229 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 DDB2Q92466 427 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 KIAA1549LQ6ZVL6 1849 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 CBLN1P23435 193 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 WDR83OSQ9Y284 106 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 LY6HO94772 140 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 TCTAP57738 103 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 HBBP68871 147 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 MED12Q93074 2177 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 RHOGP84095 191 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 MAP1LC3AQ9H492 121 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 OTORQ9NRC9 128 aa13.63□□□□□ -0.23
SCN3B-202ENST00000392770 PYYP10082 97 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 DSCR9P59020 149 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 RSPO1Q2MKA7 263 aaPredicted RBP13.62□□□□□ -0.23
SCN3B-202ENST00000392770 RNF125Q96EQ8 232 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 M0QZK8 103 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 VDAC2P45880 294 aaPredicted RBP13.62□□□□□ -0.23
SCN3B-202ENST00000392770 PRSS8Q16651 343 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 RRN3P1Q2M238 152 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 WDR86Q86TI4 376 aa13.62□□□□□ -0.23
SCN3B-202ENST00000392770 CEACAM8P31997 349 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms