RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 TVP23CQ96ET8 276 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 SIRPDQ9H106 197 aa12.05□□□□□ -0.48
SNX2-201ENST00000379516 FNDC4Q9H6D8 234 aaPredicted RBP12.05□□□□□ -0.48
SNX2-201ENST00000379516 SEPSECSQ9HD40 501 aaKnown RBP12.05□□□□□ -0.48
SNX2-201ENST00000379516 FCN1O00602 326 aa12.04□□□□□ -0.48
SNX2-201ENST00000379516 TOX4O94842 621 aa12.04□□□□□ -0.48
SNX2-201ENST00000379516 RHOBP62745 196 aa12.04□□□□□ -0.48
SNX2-201ENST00000379516 HES1Q14469 280 aa12.04□□□□□ -0.48
SNX2-201ENST00000379516 TMEM249Q2WGJ8 235 aa12.04□□□□□ -0.48
SNX2-201ENST00000379516 OR4F5Q8NH21 305 aa12.04□□□□□ -0.48
SNX2-201ENST00000379516 OR4F4Q96R69 305 aa12.04□□□□□ -0.48
SNX2-201ENST00000379516 MOSP00540 346 aa12.04□□□□□ -0.48
SNX2-201ENST00000379516 IGHV3-48P01763 117 aa12.04□□□□□ -0.48
SNX2-201ENST00000379516 ARL14EPLP0DKL9 152 aa12.04□□□□□ -0.48
SNX2-201ENST00000379516 SPATA31B1PQ5VZV4 182 aa12.04□□□□□ -0.48
SNX2-201ENST00000379516 COL12A1Q99715 3063 aa12.03□□□□□ -0.48
SNX2-201ENST00000379516 NBR2O15453 112 aa12.03□□□□□ -0.48
SNX2-201ENST00000379516 CXorf1O96002 111 aa12.03□□□□□ -0.48
SNX2-201ENST00000379516 HABP2Q14520 560 aaPredicted RBP12.03□□□□□ -0.48
SNX2-201ENST00000379516 CCDC144NLQ6NUI1 221 aa12.03□□□□□ -0.48
SNX2-201ENST00000379516 SPNS3Q6ZMD2 512 aa12.03□□□□□ -0.48
SNX2-201ENST00000379516 C19orf35Q6ZS72 473 aa12.03□□□□□ -0.48
SNX2-201ENST00000379516 SRSF12Q8WXF0 261 aaKnown RBP12.03□□□□□ -0.48
SNX2-201ENST00000379516 NPIPB3Q92617 1050 aa12.03□□□□□ -0.48
SNX2-201ENST00000379516 MISP3Q96FF7 219 aa12.03□□□□□ -0.48
SNX2-201ENST00000379516 KLF2Q9Y5W3 355 aaPredicted RBP12.03□□□□□ -0.48
SNX2-201ENST00000379516 FLNCQ14315 2725 aa12.03□□□□□ -0.48
SNX2-201ENST00000379516 TEX22C9J3V5 150 aa12.02□□□□□ -0.48
SNX2-201ENST00000379516 UBE2G2P60604 165 aa12.02□□□□□ -0.48
SNX2-201ENST00000379516 MINOS1Q5TGZ0 78 aa12.02□□□□□ -0.48
SNX2-201ENST00000379516 FAM78BQ5VT40 261 aa12.02□□□□□ -0.48
SNX2-201ENST00000379516 DYNAPQ8N1N2 210 aa12.02□□□□□ -0.48
SNX2-201ENST00000379516 C17orf50Q8WW18 174 aa12.02□□□□□ -0.48
SNX2-201ENST00000379516 ISOC2Q96AB3 205 aa12.02□□□□□ -0.48
SNX2-201ENST00000379516 EAF1Q96JC9 268 aaPredicted RBP12.02□□□□□ -0.48
SNX2-201ENST00000379516 SPOCK3Q9BQ16 436 aa12.02□□□□□ -0.48
SNX2-201ENST00000379516 LPAR2Q9HBW0 351 aa12.02□□□□□ -0.48
SNX2-201ENST00000379516 MINOS1-NBL1R4GNA1 71 aa12.02□□□□□ -0.48
SNX2-201ENST00000379516 SPTAN1Q13813 2472 aaKnown RBP12.02□□□□□ -0.49
SNX2-201ENST00000379516 LOC105371267A0A1B0GV96 52 aa12.02□□□□□ -0.49
SNX2-201ENST00000379516 COLCA2A8K830 154 aa12.02□□□□□ -0.49
SNX2-201ENST00000379516 ZNF727A8MUV8 499 aa12.02□□□□□ -0.49
SNX2-201ENST00000379516 C11orf94C9JXX5 98 aa12.02□□□□□ -0.49
SNX2-201ENST00000379516 FOXH1O75593 365 aa12.02□□□□□ -0.49
SNX2-201ENST00000379516 CNIH1O95406 144 aa12.02□□□□□ -0.49
SNX2-201ENST00000379516 SSBP2P81877 361 aaPredicted RBP12.02□□□□□ -0.49
SNX2-201ENST00000379516 ZNF674Q2M3X9 581 aa12.02□□□□□ -0.49
SNX2-201ENST00000379516 CYP2G1PQ6ZSU1 146 aa12.02□□□□□ -0.49
SNX2-201ENST00000379516 ZNF843Q8N446 348 aa12.02□□□□□ -0.49
SNX2-201ENST00000379516 ZNF114Q8NC26 417 aa12.02□□□□□ -0.49
SNX2-201ENST00000379516 TMEM250H0YL14 139 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 MFAP2P55001 183 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 CST9LP1Q5W188 147 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 C15orf54Q8N8G6 183 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 NANPQ8TBE9 248 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 FAM168AQ92567 244 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 RPUSD4Q96CM3 377 aaKnown RBP12.01□□□□□ -0.49
SNX2-201ENST00000379516 TBX15Q96SF7 602 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 PIMREGQ9BSJ6 248 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 TUBA4BQ9H853 241 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 DOPEY1Q5JWR5 2465 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 AKAP6Q13023 2319 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 OOSP1A8MZH6 123 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 MT-CO2P00403 227 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 FBLN7Q53RD9 439 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 PVRIGQ6DKI7 326 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 ETFRF1Q6IPR1 90 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 MIR17HGQ75NE6 70 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 NPBQ8NG41 125 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 OR2T10Q8NGZ9 312 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 OR1P1Q8NH06 330 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 SMIM7Q9BQ49 75 aa12.01□□□□□ -0.49
SNX2-201ENST00000379516 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
SNX2-201ENST00000379516 ASH1LQ9NR48 2969 aaKnown RBP12□□□□□ -0.49
SNX2-201ENST00000379516 NDUFA3O95167 84 aa12□□□□□ -0.49
SNX2-201ENST00000379516 UBE2E1P51965 193 aa12□□□□□ -0.49
SNX2-201ENST00000379516 RND2P52198 227 aa12□□□□□ -0.49
SNX2-201ENST00000379516 SLC25A33Q9BSK2 321 aa12□□□□□ -0.49
SNX2-201ENST00000379516 FUT9Q9Y231 359 aa12□□□□□ -0.49
SNX2-201ENST00000379516 F11RQ9Y624 299 aaKnown RBP12□□□□□ -0.49
SNX2-201ENST00000379516 ZFYVE26Q68DK2 2539 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 GCHFRP30047 84 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 ATP5G3P48201 142 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 ATP5J2P56134 94 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 PNRC1Q12796 327 aaPredicted RBP11.99□□□□□ -0.49
SNX2-201ENST00000379516 KIAA0141Q14154 515 aaPredicted RBP11.99□□□□□ -0.49
SNX2-201ENST00000379516 PARLQ9H300 379 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 SDF2L1Q9HCN8 221 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 USP9XQ93008 2570 aaPredicted RBP11.99□□□□□ -0.49
SNX2-201ENST00000379516 IGHV3-21A0A0B4J1V1 117 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 TCRBV4S1A1TA0A5B7 111 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 PLXNB1O43157 2135 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 NDUFS6O75380 124 aaKnown RBP11.99□□□□□ -0.49
SNX2-201ENST00000379516 OR2C1O95371 312 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 ZNF90Q03938 601 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 THAP8Q8NA92 274 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 C19orf24Q9BVV8 132 aa11.99□□□□□ -0.49
SNX2-201ENST00000379516 TBL2Q9Y4P3 447 aaKnown RBP11.99□□□□□ -0.49
SNX2-201ENST00000379516 NAV3Q8IVL0 2385 aa11.98□□□□□ -0.49
SNX2-201ENST00000379516 IGKV1D-37A0A075B6S9 117 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms