RNA–Protein interactions for RNA: ENST00000378746.8

KIF3A-202, Transcript of kinesin family member 3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene KIF3A, Length 6,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-202ENST00000378746 ZNF56Q15929 161 aa13.08□□□□□ -0.31
KIF3A-202ENST00000378746 NABP1Q96AH0 204 aa13.08□□□□□ -0.31
KIF3A-202ENST00000378746 FOXC2Q99958 501 aa13.08□□□□□ -0.31
KIF3A-202ENST00000378746 ATG2BQ96BY7 2078 aa13.08□□□□□ -0.31
KIF3A-202ENST00000378746 DUTP33316 252 aaKnown RBP13.08□□□□□ -0.32
KIF3A-202ENST00000378746 SNRPD3P62318 126 aaKnown RBP13.08□□□□□ -0.32
KIF3A-202ENST00000378746 QRFPP83859 136 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 SPOCK3Q9BQ16 436 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 DCTN5Q9BTE1 182 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 FBXL15Q9H469 300 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 FOXA2Q9Y261 457 aaPredicted RBP13.08□□□□□ -0.32
KIF3A-202ENST00000378746 IGKV3D-15A0A087WSY6 115 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 RAMP3O60896 148 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 SCGB3A1Q96QR1 104 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 LY96Q9Y6Y9 160 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 CD69Q07108 199 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 NMSQ5H8A3 153 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 IGKV1-12A0A0C4DH73 117 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 FOXH1O75593 365 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 IGKV1D-12P01611 117 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 STAG3L3P0CL85 134 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 BEND2Q8NDZ0 799 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 TSKUQ8WUA8 353 aa13.08□□□□□ -0.32
KIF3A-202ENST00000378746 TRBV6-6A0A0A6YYG2 114 aa13.07□□□□□ -0.32
KIF3A-202ENST00000378746 VSIRQ9H7M9 311 aa13.07□□□□□ -0.32
KIF3A-202ENST00000378746 ST20Q9HBF5 79 aa13.07□□□□□ -0.32
KIF3A-202ENST00000378746 ATP1A1-AS1Q5TC04 95 aa13.07□□□□□ -0.32
KIF3A-202ENST00000378746 GEMIN7Q9H840 131 aaKnown RBP13.07□□□□□ -0.32
KIF3A-202ENST00000378746 TIMP3P35625 211 aa13.07□□□□□ -0.32
KIF3A-202ENST00000378746 TMPRSS3P57727 454 aa13.07□□□□□ -0.32
KIF3A-202ENST00000378746 ST6GALNAC6Q969X2 333 aa13.07□□□□□ -0.32
KIF3A-202ENST00000378746 CD55P08174 381 aa13.07□□□□□ -0.32
KIF3A-202ENST00000378746 ACTL10Q5JWF8 245 aa13.07□□□□□ -0.32
KIF3A-202ENST00000378746 SAMD13Q5VXD3 122 aa13.07□□□□□ -0.32
KIF3A-202ENST00000378746 PAX1P15863 534 aa13.07□□□□□ -0.32
KIF3A-202ENST00000378746 C18orf15Q96N68 181 aa13.07□□□□□ -0.32
KIF3A-202ENST00000378746 OR9G9P0C7N8 305 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 LINC01559Q495D7 138 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 C1orf194Q5T5A4 169 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 Q6ZS49 121 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 OR5A1Q8NGJ0 315 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 FBXL7Q9UJT9 491 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 PPBPP02775 128 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 LINC00614P0C842 121 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 SCGB1A1P11684 91 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 ZIC4Q8N9L1 334 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 ARPC1AQ92747 370 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 MS4A6AQ9H2W1 248 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 RRN3P1Q2M238 152 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 FBLN7Q53RD9 439 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 ASCL2Q99929 193 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 ASCC3Q8N3C0 2202 aaKnown RBP13.06□□□□□ -0.32
KIF3A-202ENST00000378746 FDCSPQ8NFU4 85 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 ZNF257Q9Y2Q1 563 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 PGPEP1LA6NFU8 196 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.06□□□□□ -0.32
KIF3A-202ENST00000378746 CLPSP04118 112 aa13.06□□□□□ -0.32
KIF3A-202ENST00000378746 HBDP02042 147 aa13.05□□□□□ -0.32
KIF3A-202ENST00000378746 GATA2P23769 480 aaPredicted RBP13.05□□□□□ -0.32
KIF3A-202ENST00000378746 A0A1B0GWB2 263 aa13.05□□□□□ -0.32
KIF3A-202ENST00000378746 CELA3BP08861 270 aa13.05□□□□□ -0.32
KIF3A-202ENST00000378746 NEU4Q8WWR8 484 aaPredicted RBP13.05□□□□□ -0.32
KIF3A-202ENST00000378746 SLC50A1Q9BRV3 221 aa13.05□□□□□ -0.32
KIF3A-202ENST00000378746 TMEM14EPQ6UXP3 125 aa13.05□□□□□ -0.32
KIF3A-202ENST00000378746 PDLIM4P50479 330 aa13.05□□□□□ -0.32
KIF3A-202ENST00000378746 PNRC2Q9NPJ4 139 aaKnown RBP13.05□□□□□ -0.32
KIF3A-202ENST00000378746 NPFFO15130 113 aa13.05□□□□□ -0.32
KIF3A-202ENST00000378746 TREML4Q6UXN2 200 aa13.05□□□□□ -0.32
KIF3A-202ENST00000378746 AKIRIN1Q9H9L7 192 aaPredicted RBP13.04□□□□□ -0.32
KIF3A-202ENST00000378746 SEC11AP67812 179 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 TMEM170BQ5T4T1 132 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 NXT2Q9NPJ8 142 aaKnown RBP13.04□□□□□ -0.32
KIF3A-202ENST00000378746 ZSWIM8A7E2V4 1837 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 C17orf100A8MU93 164 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 E9PQ18 207 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 ZNF124Q15973 351 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 MEIG1Q5JSS6 88 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 PPP1R27Q86WC6 154 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 FAM57AQ8TBR7 257 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 MOB4Q9Y3A3 225 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 GREB1Q4ZG55 1949 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 FABP5P3A8MUU1 101 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 EFNA2O43921 213 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 IGKV1D-33P01593 117 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 IGKV1-33P01594 117 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 TMEM42Q69YG0 159 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 OR5AN1Q8NGI8 311 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 ANK1P16157 1881 aa13.04□□□□□ -0.32
KIF3A-202ENST00000378746 LEPP41159 167 aa13.03□□□□□ -0.32
KIF3A-202ENST00000378746 GNG5P63218 68 aa13.03□□□□□ -0.32
KIF3A-202ENST00000378746 GGTLC1Q9BX51 225 aa13.03□□□□□ -0.32
KIF3A-202ENST00000378746 SLC25A2Q9BXI2 301 aa13.03□□□□□ -0.32
KIF3A-202ENST00000378746 IGKV1-27A0A075B6S5 117 aa13.03□□□□□ -0.32
KIF3A-202ENST00000378746 ATXN7O15265 892 aaPredicted RBP13.03□□□□□ -0.32
KIF3A-202ENST00000378746 WDR90Q96KV7 1748 aa13.03□□□□□ -0.32
KIF3A-202ENST00000378746 CACNG7P62955 275 aa13.03□□□□□ -0.32
KIF3A-202ENST00000378746 LINC01551Q86U37 167 aa13.03□□□□□ -0.32
KIF3A-202ENST00000378746 CEACAM4O75871 244 aa13.03□□□□□ -0.32
KIF3A-202ENST00000378746 EMP1P54849 157 aa13.03□□□□□ -0.32
KIF3A-202ENST00000378746 NUTF2P61970 127 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms