RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 LSM4Q9Y4Z0 139 aaKnown RBP13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 CA2P00918 260 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 IGLV1-44P01699 117 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 OR10J4P0C629 311 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 ERVK-16P61578 105 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 RELBQ01201 579 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 TEPPQ6URK8 271 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 C19orf35Q6ZS72 473 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 CLUHP3Q96NS8 147 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 S1PR3Q99500 378 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 SLC35D1Q9NTN3 355 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 JPT1Q9UK76 154 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 COX11Q9Y6N1 276 aa13.63□□□□□ -0.23
PCDHA1-201ENST00000378133 SRRM5B3KS81 715 aa13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 AREGP15514 252 aa13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 LOXL3P58215 753 aa13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 STUMQ69YW2 141 aa13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 TMEM140Q9NV12 185 aa13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 MRPS16Q9Y3D3 137 aaKnown RBP13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 HLA-DQA1P01909 254 aa13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 AMY1AP04745 511 aa13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 TIGITQ495A1 244 aa13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 GCSAMQ8N6F7 178 aa13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 ZNF439Q8NDP4 499 aa13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 OSTCQ9NRP0 149 aa13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 PLSCR4Q9NRQ2 329 aa13.62□□□□□ -0.23
PCDHA1-201ENST00000378133 MGST3O14880 152 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 ACTL6BO94805 426 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 LCN12Q6JVE5 192 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 DEFB124Q8NES8 71 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 IFI27L2Q9H2X8 130 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 ZNF71Q9NQZ8 489 aaPredicted RBP13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 IL19Q9UHD0 177 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 CDC42EP3Q9UKI2 254 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 FAM90A9PA6NNJ1 464 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 TOMM40O96008 361 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 APCSP02743 223 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 RAB31Q13636 194 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 PSG5Q15238 335 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 OR52E5Q8NH55 327 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 CLEC7AQ9BXN2 247 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 SERTAD4Q9NUC0 356 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 TCF19Q9Y242 345 aa13.61□□□□□ -0.23
PCDHA1-201ENST00000378133 MIR17HGQ75NE6 70 aa13.6□□□□□ -0.23
PCDHA1-201ENST00000378133 PMCHL1Q16048 86 aa13.6□□□□□ -0.23
PCDHA1-201ENST00000378133 FAM201AQ5SY85 155 aa13.6□□□□□ -0.23
PCDHA1-201ENST00000378133 PPP1R35Q8TAP8 253 aa13.6□□□□□ -0.23
PCDHA1-201ENST00000378133 SARAFQ96BY9 339 aa13.6□□□□□ -0.23
PCDHA1-201ENST00000378133 DSCAMO60469 2012 aa13.59□□□□□ -0.23
PCDHA1-201ENST00000378133 MZT1Q08AG7 82 aa13.59□□□□□ -0.23
PCDHA1-201ENST00000378133 MOGAT3Q86VF5 341 aa13.59□□□□□ -0.23
PCDHA1-201ENST00000378133 OR2V2Q96R30 315 aa13.59□□□□□ -0.23
PCDHA1-201ENST00000378133 DMXL1Q9Y485 3027 aa13.59□□□□□ -0.23
PCDHA1-201ENST00000378133 SPAARA0A1B0GVQ0 90 aa13.59□□□□□ -0.23
PCDHA1-201ENST00000378133 MGST1P10620 155 aaKnown RBP13.59□□□□□ -0.23
PCDHA1-201ENST00000378133 CR1LQ2VPA4 569 aa13.59□□□□□ -0.23
PCDHA1-201ENST00000378133 IBA57Q5T440 356 aaKnown RBP13.59□□□□□ -0.23
PCDHA1-201ENST00000378133 BHLHA15Q7RTS1 189 aaPredicted RBP13.59□□□□□ -0.23
PCDHA1-201ENST00000378133 DKK4Q9UBT3 224 aa13.59□□□□□ -0.23
PCDHA1-201ENST00000378133 PROCRQ9UNN8 238 aa13.59□□□□□ -0.23
PCDHA1-201ENST00000378133 IGHV2-26A0A0B4J1V2 119 aa13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 F2RL2O00254 374 aa13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 ISLRO14498 428 aa13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 SELENOVP59797 346 aa13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 LHFPL4Q7Z7J7 247 aa13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 OR5B3Q8NH48 314 aa13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 CALYQ9NYX4 217 aa13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 SH3BGRL2Q9UJC5 107 aa13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 TNCP24821 2201 aa13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 WT1P19544 449 aaPredicted RBP13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 USF1P22415 310 aaPredicted RBP13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 GCM1Q9NP62 436 aa13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 ZNF331Q9NQX6 463 aaPredicted RBP13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 TMEM167BQ9NRX6 74 aa13.58□□□□□ -0.24
PCDHA1-201ENST00000378133 EP300Q09472 2414 aaPredicted RBP13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 SMIM27A0A1W2PRY6 76 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 SPRY3O43610 288 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 IGFBP2P18065 325 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 CT45A1Q5HYN5 189 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 CT45A3Q8NHU0 189 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 C18orf32Q8TCD1 76 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 DDB2Q92466 427 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 SLC25A15Q9Y619 301 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 TRAV17A0A0B4J275 112 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 AHRRA9YTQ3 701 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 MYOD1P15172 320 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 NBL1P41271 181 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 SLAQ13239 276 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 FBLN7Q53RD9 439 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 OR4C5Q8NGB2 326 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 OR2D3Q8NGH3 330 aa13.57□□□□□ -0.24
PCDHA1-201ENST00000378133 TRAV9-2A0A087WT02 112 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 TNXAQ16473 311 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 Q56UQ5 140 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 OR4S2Q8NH73 311 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 HINT2Q9BX68 163 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 MRPL27Q9P0M9 148 aaKnown RBP13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 ARL2-SNX15V9GYD0 113 aa13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 RP1L1Q8IWN7 2480 aaPredicted RBP13.56□□□□□ -0.24
PCDHA1-201ENST00000378133 IZUMO1RA6ND01 250 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 135.2 ms