RNA–Protein interactions for RNA: ENST00000377561.6

CNTNAP3B-203, Transcript of contactin associated protein like 3B, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 5,379 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-203ENST00000377561 CLDN16Q9Y5I7 305 aa15.64■□□□□ 0.09
CNTNAP3B-203ENST00000377561 RTTNQ86VV8 2226 aa15.64■□□□□ 0.09
CNTNAP3B-203ENST00000377561 SLC25A34Q6PIV7 304 aa15.64■□□□□ 0.09
CNTNAP3B-203ENST00000377561 IL36BQ9NZH7 164 aa15.64■□□□□ 0.09
CNTNAP3B-203ENST00000377561 DPM3Q9P2X0 92 aa15.64■□□□□ 0.09
CNTNAP3B-203ENST00000377561 C5orf63A6NC05 138 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 CBLN1P23435 193 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 SSBP3Q9BWW4 388 aaPredicted RBP15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 CACNA1DQ01668 2161 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 IGHV3OR16-13A0A075B7E8 117 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 IGHV3-74A0A0B4J1X5 117 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 IGHV1-18A0A0C4DH31 117 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 SCO2A0A1W2PP80 73 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 OTX1P32242 354 aaPredicted RBP15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 NUTF2P61970 127 aaKnown RBP15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 RNASEH2CQ8TDP1 164 aaKnown RBP15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 CYTL1Q9NRR1 136 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 C7orf71A4D174 169 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 NBEAP1P0C6P0 100 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 TRBV20OR9-2A0A075B6H5 130 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 NPFFO15130 113 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 CEACAM4O75871 244 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 TMEM42Q69YG0 159 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 RTN4RL2Q86UN3 420 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 RSPO3Q9BXY4 272 aaPredicted RBP15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 FBXL15Q9H469 300 aa15.63■□□□□ 0.09
CNTNAP3B-203ENST00000377561 BMPERQ8N8U9 685 aa15.62■□□□□ 0.09
CNTNAP3B-203ENST00000377561 C15orf61A6NNL5 157 aa15.62■□□□□ 0.09
CNTNAP3B-203ENST00000377561 UPK2O00526 184 aa15.62■□□□□ 0.09
CNTNAP3B-203ENST00000377561 PLP1P60201 277 aa15.62■□□□□ 0.09
CNTNAP3B-203ENST00000377561 TMEM144Q7Z5S9 345 aa15.62■□□□□ 0.09
CNTNAP3B-203ENST00000377561 TMEM262E9PQX1 116 aa15.62■□□□□ 0.09
CNTNAP3B-203ENST00000377561 CSRP1P21291 193 aaKnown RBP15.62■□□□□ 0.09
CNTNAP3B-203ENST00000377561 HOXA5P20719 270 aa15.61■□□□□ 0.09
CNTNAP3B-203ENST00000377561 RNF144BQ7Z419 303 aa15.61■□□□□ 0.09
CNTNAP3B-203ENST00000377561 C9JCJ5 164 aa15.61■□□□□ 0.09
CNTNAP3B-203ENST00000377561 CNOT1A5YKK6 2376 aaKnown RBP15.61■□□□□ 0.09
CNTNAP3B-203ENST00000377561 SAA1P0DJI8 122 aaPredicted RBP15.61■□□□□ 0.09
CNTNAP3B-203ENST00000377561 SUMO2P61956 95 aaKnown RBP15.61■□□□□ 0.09
CNTNAP3B-203ENST00000377561 JOSD1Q15040 202 aaPredicted RBP15.61■□□□□ 0.09
CNTNAP3B-203ENST00000377561 FOXL2NBQ6ZUU3 175 aa15.61■□□□□ 0.09
CNTNAP3B-203ENST00000377561 MRAP2Q96G30 205 aa15.61■□□□□ 0.09
CNTNAP3B-203ENST00000377561 NAPSAO96009 420 aa15.61■□□□□ 0.09
CNTNAP3B-203ENST00000377561 CFPP27918 469 aa15.61■□□□□ 0.09
CNTNAP3B-203ENST00000377561 MIR17HGQ75NE6 70 aa15.61■□□□□ 0.09
CNTNAP3B-203ENST00000377561 DUTP33316 252 aaKnown RBP15.6■□□□□ 0.09
CNTNAP3B-203ENST00000377561 RPL23P62829 140 aaKnown RBP15.6■□□□□ 0.09
CNTNAP3B-203ENST00000377561 LEMD1Q68G75 181 aa15.6■□□□□ 0.09
CNTNAP3B-203ENST00000377561 NEU4Q8WWR8 484 aaPredicted RBP15.6■□□□□ 0.09
CNTNAP3B-203ENST00000377561 B3GALT5-AS1P59052 145 aa15.6■□□□□ 0.09
CNTNAP3B-203ENST00000377561 HBBP68871 147 aa15.6■□□□□ 0.09
CNTNAP3B-203ENST00000377561 FAM90A9PA6NNJ1 464 aa15.6■□□□□ 0.09
CNTNAP3B-203ENST00000377561 TFF1P04155 84 aa15.6■□□□□ 0.09
CNTNAP3B-203ENST00000377561 CD55P08174 381 aa15.6■□□□□ 0.09
CNTNAP3B-203ENST00000377561 SLC17A3O00476 420 aa15.6■□□□□ 0.09
CNTNAP3B-203ENST00000377561 PLXNA4Q9HCM2 1894 aa15.6■□□□□ 0.09
CNTNAP3B-203ENST00000377561 PEX7O00628 323 aa15.59■□□□□ 0.09
CNTNAP3B-203ENST00000377561 CD5P06127 495 aa15.59■□□□□ 0.09
CNTNAP3B-203ENST00000377561 CCL3L1P16619 93 aa15.59■□□□□ 0.09
CNTNAP3B-203ENST00000377561 A0A0G2JLM5 398 aa15.59■□□□□ 0.09
CNTNAP3B-203ENST00000377561 SRSF4Q08170 494 aaKnown RBP15.59■□□□□ 0.09
CNTNAP3B-203ENST00000377561 F11RQ9Y624 299 aaKnown RBP15.59■□□□□ 0.09
CNTNAP3B-203ENST00000377561 TRAV9-1A0A075B6T8 112 aa15.59■□□□□ 0.09
CNTNAP3B-203ENST00000377561 IGHV3-23P01764 117 aa15.59■□□□□ 0.09
CNTNAP3B-203ENST00000377561 FBXL7Q9UJT9 491 aa15.59■□□□□ 0.09
CNTNAP3B-203ENST00000377561 PSMB11A5LHX3 300 aa15.58■□□□□ 0.09
CNTNAP3B-203ENST00000377561 H7C1H1 209 aa15.58■□□□□ 0.09
CNTNAP3B-203ENST00000377561 IGHV3-49A0A0A0MS15 119 aa15.58■□□□□ 0.09
CNTNAP3B-203ENST00000377561 IL18BPO95998 194 aa15.58■□□□□ 0.09
CNTNAP3B-203ENST00000377561 CCL20P78556 96 aa15.58■□□□□ 0.09
CNTNAP3B-203ENST00000377561 MBD3L1Q8WWY6 194 aa15.58■□□□□ 0.09
CNTNAP3B-203ENST00000377561 CTAG1AP78358 180 aa15.58■□□□□ 0.08
CNTNAP3B-203ENST00000377561 GCSAMLQ5JQS6 135 aa15.58■□□□□ 0.08
CNTNAP3B-203ENST00000377561 OR52E5Q8NH55 327 aa15.58■□□□□ 0.08
CNTNAP3B-203ENST00000377561 IGKV1D-33P01593 117 aa15.58■□□□□ 0.08
CNTNAP3B-203ENST00000377561 IGKV1-33P01594 117 aa15.58■□□□□ 0.08
CNTNAP3B-203ENST00000377561 OR13C6PQ8NH95 151 aa15.58■□□□□ 0.08
CNTNAP3B-203ENST00000377561 PLSCR4Q9NRQ2 329 aa15.58■□□□□ 0.08
CNTNAP3B-203ENST00000377561 FOXF2Q12947 444 aa15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 EP300Q09472 2414 aaPredicted RBP15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 GATA2P23769 480 aaPredicted RBP15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 TNFRSF18Q9Y5U5 241 aa15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 IGHV3-66A0A0C4DH42 116 aa15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 A1L4Q6 167 aa15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 DNAL4O96015 105 aa15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 OR9G9P0C7N8 305 aa15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 TBR1Q16650 682 aa15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 DMRTA1Q5VZB9 504 aa15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 TMEM101Q96IK0 257 aa15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 FOXA2Q9Y261 457 aaPredicted RBP15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 ANAPC1Q9H1A4 1944 aa15.57■□□□□ 0.08
CNTNAP3B-203ENST00000377561 SRRM5B3KS81 715 aa15.56■□□□□ 0.08
CNTNAP3B-203ENST00000377561 ASIPP42127 132 aa15.56■□□□□ 0.08
CNTNAP3B-203ENST00000377561 CD69Q07108 199 aa15.56■□□□□ 0.08
CNTNAP3B-203ENST00000377561 ATOH7Q8N100 152 aa15.56■□□□□ 0.08
CNTNAP3B-203ENST00000377561 REG4Q9BYZ8 158 aa15.56■□□□□ 0.08
CNTNAP3B-203ENST00000377561 WDR83OSQ9Y284 106 aa15.56■□□□□ 0.08
CNTNAP3B-203ENST00000377561 S4R3C0 116 aa15.56■□□□□ 0.08
CNTNAP3B-203ENST00000377561 NMSQ5H8A3 153 aa15.56■□□□□ 0.08
CNTNAP3B-203ENST00000377561 FAM168AQ92567 244 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms