RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 TBX15Q96SF7 602 aa10.02□□□□□ -0.81
VRK3-202ENST00000377011 TXNDC17Q9BRA2 123 aa10.02□□□□□ -0.81
VRK3-202ENST00000377011 PRDM13Q9H4Q3 707 aa10.02□□□□□ -0.81
VRK3-202ENST00000377011 WDR83OSQ9Y284 106 aa10.02□□□□□ -0.81
VRK3-202ENST00000377011 MARCH11A6NNE9 402 aa10.01□□□□□ -0.81
VRK3-202ENST00000377011 TSTD3H0UI37 97 aa10.01□□□□□ -0.81
VRK3-202ENST00000377011 YPEL1O60688 119 aa10.01□□□□□ -0.81
VRK3-202ENST00000377011 SPCS3P61009 180 aa10.01□□□□□ -0.81
VRK3-202ENST00000377011 BRD3OSQ6XYD6 125 aa10.01□□□□□ -0.81
VRK3-202ENST00000377011 OR13A1Q8NGR1 328 aa10.01□□□□□ -0.81
VRK3-202ENST00000377011 R3HDM4Q96D70 268 aa10.01□□□□□ -0.81
VRK3-202ENST00000377011 ACY3Q96HD9 319 aa10.01□□□□□ -0.81
VRK3-202ENST00000377011 DUX5Q96PT3 197 aa10.01□□□□□ -0.81
VRK3-202ENST00000377011 YPEL2Q96QA6 119 aa10.01□□□□□ -0.81
VRK3-202ENST00000377011 KCNIP2Q9NS61 270 aa10.01□□□□□ -0.81
VRK3-202ENST00000377011 TRAV40A0A0B4J280 105 aa10□□□□□ -0.81
VRK3-202ENST00000377011 MGST3O14880 152 aa10□□□□□ -0.81
VRK3-202ENST00000377011 PDE6DO43924 150 aa10□□□□□ -0.81
VRK3-202ENST00000377011 GATA3P23771 443 aa10□□□□□ -0.81
VRK3-202ENST00000377011 PRDX2P32119 198 aa10□□□□□ -0.81
VRK3-202ENST00000377011 DUTP33316 252 aaKnown RBP10□□□□□ -0.81
VRK3-202ENST00000377011 GPR12P47775 334 aa10□□□□□ -0.81
VRK3-202ENST00000377011 SSTP61278 116 aa10□□□□□ -0.81
VRK3-202ENST00000377011 ARF6P62330 175 aa10□□□□□ -0.81
VRK3-202ENST00000377011 RPL23P62829 140 aaKnown RBP10□□□□□ -0.81
VRK3-202ENST00000377011 Q3ZCU0 254 aa10□□□□□ -0.81
VRK3-202ENST00000377011 RAB24Q969Q5 203 aa10□□□□□ -0.81
VRK3-202ENST00000377011 SNX22Q96L94 193 aa10□□□□□ -0.81
VRK3-202ENST00000377011 PCGF1Q9BSM1 259 aa10□□□□□ -0.81
VRK3-202ENST00000377011 SLC25A22Q9H936 323 aa10□□□□□ -0.81
VRK3-202ENST00000377011 LINC00473A8K010 186 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 C15orf62A8K5M9 175 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 H7BYZ3 331 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 F2RL2O00254 374 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 FABP4P15090 132 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 SSTR5P35346 364 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 CDC34P49427 236 aaPredicted RBP9.99□□□□□ -0.81
VRK3-202ENST00000377011 FAM3BP58499 235 aaPredicted RBP9.99□□□□□ -0.81
VRK3-202ENST00000377011 ADIRFQ15847 76 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 LBHQ53QV2 105 aaPredicted RBP9.99□□□□□ -0.81
VRK3-202ENST00000377011 REC114Q7Z4M0 266 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 Q8N7P7 452 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 PACRGQ96M98 296 aaPredicted RBP9.99□□□□□ -0.81
VRK3-202ENST00000377011 SIRPDQ9H106 197 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 PARLQ9H300 379 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 OR6C3Q9NZP0 311 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 RPUSD1Q9UJJ7 312 aaKnown RBP9.99□□□□□ -0.81
VRK3-202ENST00000377011 PSG11Q9UQ72 335 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 TRBV23-1A0A0A0MS06 115 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 F6UZH7 168 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 RBMXL2O75526 392 aaKnown RBP9.99□□□□□ -0.81
VRK3-202ENST00000377011 HRASP01112 189 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 GPX4P36969 197 aaPredicted RBP9.99□□□□□ -0.81
VRK3-202ENST00000377011 ERVK-16P61578 105 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 JOSD1Q15040 202 aaPredicted RBP9.99□□□□□ -0.81
VRK3-202ENST00000377011 TMEM30BQ3MIR4 351 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 C9orf152Q5JTZ5 239 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 BTNL3Q6UXE8 466 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 ZNF600Q6ZNG1 722 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 C16orf82Q7Z2V1 217 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 SIGLECL1Q8N7X8 197 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.99□□□□□ -0.81
VRK3-202ENST00000377011 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.99□□□□□ -0.81
VRK3-202ENST00000377011 LY6G5BQ8NDX9 201 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 OR51G1Q8NGK1 321 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 OR4X1Q8NH49 305 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 ZDHHC16Q969W1 377 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 HIST1H2BLQ99880 126 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 SSX3Q99909 188 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 C19orf24Q9BVV8 132 aa9.99□□□□□ -0.81
VRK3-202ENST00000377011 PPP5D1E7EU14 171 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 ST8SIA5O15466 376 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 TCF21O43680 179 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 GCGP01275 180 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 TYMSP04818 313 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 CD1BP29016 333 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 OPRK1P41145 380 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 GALR1P47211 349 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 RAB7AP51149 207 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 MORN2Q502X0 79 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 GFI1BQ5VTD9 330 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 PNKDQ8N490 385 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 OR1P1Q8NH06 330 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 OR4F5Q8NH21 305 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 NOL4LQ96MY1 436 aaPredicted RBP9.98□□□□□ -0.81
VRK3-202ENST00000377011 OR4F4Q96R69 305 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 IMMP2LQ96T52 175 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 DSCAML1Q8TD84 2053 aa9.98□□□□□ -0.81
VRK3-202ENST00000377011 CENPVL3A0A0U1RRI6 287 aa9.97□□□□□ -0.81
VRK3-202ENST00000377011 NDUFB3O43676 98 aa9.97□□□□□ -0.81
VRK3-202ENST00000377011 ENSAO43768 121 aaKnown RBP9.97□□□□□ -0.81
VRK3-202ENST00000377011 GGCTO75223 188 aaKnown RBP9.97□□□□□ -0.81
VRK3-202ENST00000377011 KLRD1Q13241 179 aa9.97□□□□□ -0.81
VRK3-202ENST00000377011 OR4A16Q8NH70 328 aa9.97□□□□□ -0.81
VRK3-202ENST00000377011 TMEM170AQ8WVE7 144 aa9.97□□□□□ -0.81
VRK3-202ENST00000377011 H1FXQ92522 213 aaKnown RBP9.97□□□□□ -0.81
VRK3-202ENST00000377011 RPUSD4Q96CM3 377 aaKnown RBP9.97□□□□□ -0.81
VRK3-202ENST00000377011 SDSLQ96GA7 329 aa9.97□□□□□ -0.81
VRK3-202ENST00000377011 DCTN5Q9BTE1 182 aa9.97□□□□□ -0.81
VRK3-202ENST00000377011 QTRT1Q9BXR0 403 aaKnown RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms