RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 FBXL15Q9H469 300 aa13.46□□□□□ -0.25
HLA-A-202ENST00000376806 SMCO4Q9NRQ5 59 aa13.46□□□□□ -0.25
HLA-A-202ENST00000376806 SLC45A2Q9UMX9 530 aa13.46□□□□□ -0.25
HLA-A-202ENST00000376806 KLF2Q9Y5W3 355 aaPredicted RBP13.46□□□□□ -0.25
HLA-A-202ENST00000376806 A0A1W2PRD5 423 aa13.46□□□□□ -0.26
HLA-A-202ENST00000376806 A0A1W2PRF3 423 aa13.46□□□□□ -0.26
HLA-A-202ENST00000376806 A0A1W2PRM7 423 aa13.46□□□□□ -0.26
HLA-A-202ENST00000376806 ATF4P18848 351 aaPredicted RBP13.46□□□□□ -0.26
HLA-A-202ENST00000376806 PDLIM4P50479 330 aa13.46□□□□□ -0.26
HLA-A-202ENST00000376806 CD81P60033 236 aa13.46□□□□□ -0.26
HLA-A-202ENST00000376806 GNB1P62873 340 aa13.46□□□□□ -0.26
HLA-A-202ENST00000376806 MLANAQ16655 118 aa13.46□□□□□ -0.26
HLA-A-202ENST00000376806 ZNF114Q8NC26 417 aa13.46□□□□□ -0.26
HLA-A-202ENST00000376806 CCL19Q99731 98 aa13.46□□□□□ -0.26
HLA-A-202ENST00000376806 CRYBG3Q68DQ2 2970 aa13.46□□□□□ -0.26
HLA-A-202ENST00000376806 LINC00869P0C866 280 aa13.45□□□□□ -0.26
HLA-A-202ENST00000376806 STAG3L2P0CL84 134 aa13.45□□□□□ -0.26
HLA-A-202ENST00000376806 STAG3L3P0CL85 134 aa13.45□□□□□ -0.26
HLA-A-202ENST00000376806 OR10J1P30954 320 aa13.45□□□□□ -0.26
HLA-A-202ENST00000376806 DOPEY2Q9Y3R5 2298 aa13.45□□□□□ -0.26
HLA-A-202ENST00000376806 RHOBP62745 196 aa13.44□□□□□ -0.26
HLA-A-202ENST00000376806 TVP23CQ96ET8 276 aa13.44□□□□□ -0.26
HLA-A-202ENST00000376806 FNDC4Q9H6D8 234 aaPredicted RBP13.44□□□□□ -0.26
HLA-A-202ENST00000376806 NDUFS6O75380 124 aaKnown RBP13.44□□□□□ -0.26
HLA-A-202ENST00000376806 ARL14EPLP0DKL9 152 aa13.44□□□□□ -0.26
HLA-A-202ENST00000376806 AREGP15514 252 aa13.44□□□□□ -0.26
HLA-A-202ENST00000376806 SSBP2P81877 361 aaPredicted RBP13.44□□□□□ -0.26
HLA-A-202ENST00000376806 PLGLAQ15195 96 aa13.44□□□□□ -0.26
HLA-A-202ENST00000376806 MMDQ15546 238 aa13.44□□□□□ -0.26
HLA-A-202ENST00000376806 MINOS1Q5TGZ0 78 aa13.44□□□□□ -0.26
HLA-A-202ENST00000376806 OR2T6Q8NHC8 308 aa13.44□□□□□ -0.26
HLA-A-202ENST00000376806 ABHD5Q8WTS1 349 aa13.44□□□□□ -0.26
HLA-A-202ENST00000376806 ACY3Q96HD9 319 aa13.44□□□□□ -0.26
HLA-A-202ENST00000376806 MINOS1-NBL1R4GNA1 71 aa13.44□□□□□ -0.26
HLA-A-202ENST00000376806 AKAP6Q13023 2319 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 TACC2O95359 2948 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 OOSP1A8MZH6 123 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 TEX22C9J3V5 150 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 NBR2O15453 112 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 PAGE4O60829 102 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 CXorf1O96002 111 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 MOSP00540 346 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 PAX6P26367 422 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 COL8A1P27658 744 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 SPATA31B1PQ5VZV4 182 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 PVRIGQ6DKI7 326 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 CCDC144NLQ6NUI1 221 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 SRSF12Q8WXF0 261 aaKnown RBP13.43□□□□□ -0.26
HLA-A-202ENST00000376806 SPOCK3Q9BQ16 436 aa13.43□□□□□ -0.26
HLA-A-202ENST00000376806 TMEM250H0YL14 139 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 TOX4O94842 621 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 SPNS3Q6ZMD2 512 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 SEPSECSQ9HD40 501 aaKnown RBP13.42□□□□□ -0.26
HLA-A-202ENST00000376806 WNK2Q9Y3S1 2297 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 LOC105371267A0A1B0GV96 52 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 FCN1O00602 326 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 FOXH1O75593 365 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 NDUFA3O95167 84 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 APELAP0DMC3 54 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 MFAP2P55001 183 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 SSX2Q16385 188 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 DYNAPQ8N1N2 210 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 C15orf54Q8N8G6 183 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 NPBQ8NG41 125 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 OR4F5Q8NH21 305 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 EAF1Q96JC9 268 aaPredicted RBP13.42□□□□□ -0.26
HLA-A-202ENST00000376806 OR4F4Q96R69 305 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 TBX15Q96SF7 602 aa13.42□□□□□ -0.26
HLA-A-202ENST00000376806 GATA2P23769 480 aaPredicted RBP13.41□□□□□ -0.26
HLA-A-202ENST00000376806 LGALS4P56470 323 aa13.41□□□□□ -0.26
HLA-A-202ENST00000376806 FBLN7Q53RD9 439 aa13.41□□□□□ -0.26
HLA-A-202ENST00000376806 C19orf35Q6ZS72 473 aa13.41□□□□□ -0.26
HLA-A-202ENST00000376806 CYP2G1PQ6ZSU1 146 aa13.41□□□□□ -0.26
HLA-A-202ENST00000376806 OR1P1Q8NH06 330 aa13.41□□□□□ -0.26
HLA-A-202ENST00000376806 PIMREGQ9BSJ6 248 aa13.41□□□□□ -0.26
HLA-A-202ENST00000376806 TUBA4BQ9H853 241 aa13.41□□□□□ -0.26
HLA-A-202ENST00000376806 ABCA2Q9BZC7 2435 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 COLCA2A8K830 154 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 C11orf94C9JXX5 98 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 CD24P25063 80 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 UBE2G2P60604 165 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 HES1Q14469 280 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 ETFRF1Q6IPR1 90 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 THAP8Q8NA92 274 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 OR2T10Q8NGZ9 312 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 C17orf50Q8WW18 174 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 MISP3Q96FF7 219 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 MRPL36Q9P0J6 103 aaKnown RBP13.4□□□□□ -0.26
HLA-A-202ENST00000376806 FUT9Q9Y231 359 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 TBL2Q9Y4P3 447 aaKnown RBP13.4□□□□□ -0.26
HLA-A-202ENST00000376806 F11RQ9Y624 299 aaKnown RBP13.4□□□□□ -0.26
HLA-A-202ENST00000376806 ZNF727A8MUV8 499 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 CRYGCP07315 174 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 GCHFRP30047 84 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 PNRC1Q12796 327 aaPredicted RBP13.4□□□□□ -0.26
HLA-A-202ENST00000376806 FAM78BQ5VT40 261 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 MIR17HGQ75NE6 70 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 NANPQ8TBE9 248 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 FAM168AQ92567 244 aa13.4□□□□□ -0.26
HLA-A-202ENST00000376806 NPIPB3Q92617 1050 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms