RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 I3L2K1 104 aa15.62■□□□□ 0.09
VSX1-201ENST00000376707 SPRY2O43597 315 aa15.62■□□□□ 0.09
VSX1-201ENST00000376707 RAB3DO95716 219 aa15.62■□□□□ 0.09
VSX1-201ENST00000376707 IGKV1-5P01602 117 aa15.62■□□□□ 0.09
VSX1-201ENST00000376707 CTSDP07339 412 aaPredicted RBP15.62■□□□□ 0.09
VSX1-201ENST00000376707 STEAP1BQ6NZ63 245 aa15.62■□□□□ 0.09
VSX1-201ENST00000376707 ZFAND1Q8TCF1 268 aa15.62■□□□□ 0.09
VSX1-201ENST00000376707 SMPXQ9UHP9 88 aa15.62■□□□□ 0.09
VSX1-201ENST00000376707 C3orf85A0A1B0GTC6 90 aa15.61■□□□□ 0.09
VSX1-201ENST00000376707 UBE2CO00762 179 aa15.61■□□□□ 0.09
VSX1-201ENST00000376707 BMI1P35226 326 aa15.61■□□□□ 0.09
VSX1-201ENST00000376707 PPP5CP53041 499 aa15.61■□□□□ 0.09
VSX1-201ENST00000376707 TMBIM6P55061 237 aa15.61■□□□□ 0.09
VSX1-201ENST00000376707 DEFB135Q30KP9 77 aa15.61■□□□□ 0.09
VSX1-201ENST00000376707 WFDC3Q8IUB2 231 aa15.61■□□□□ 0.09
VSX1-201ENST00000376707 CLVS1Q8IUQ0 354 aaPredicted RBP15.61■□□□□ 0.09
VSX1-201ENST00000376707 STPG3Q8N7X2 389 aa15.61■□□□□ 0.09
VSX1-201ENST00000376707 OR13C8Q8NGS7 320 aa15.61■□□□□ 0.09
VSX1-201ENST00000376707 SMIM4Q8WVI0 70 aa15.61■□□□□ 0.09
VSX1-201ENST00000376707 TXN2Q99757 166 aa15.61■□□□□ 0.09
VSX1-201ENST00000376707 CCDC59Q9P031 241 aaKnown RBP15.61■□□□□ 0.09
VSX1-201ENST00000376707 A0A0B4J293 547 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 KIR2DL5BA0A0G2JN68 375 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 KIR2DL5BA0A0G2JPC4 375 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 IGHV7-4-1A0A0J9YVY3 117 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 A0A0J9YWU9 116 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 CXorf65A6NEN9 183 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 INS-IGF2F8WCM5 200 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 B3GALNT1O75752 331 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 ATG12O94817 140 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 MT-CO2P00403 227 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 ERHP84090 104 aaKnown RBP15.6■□□□□ 0.09
VSX1-201ENST00000376707 MEF2DQ14814 521 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 IZUMO4Q1ZYL8 232 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 KIR2DL5AQ8N109 375 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 CCDC71LQ8N9Z2 235 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 TMEM116Q8NCL8 245 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 KIR2DL5BQ8NHK3 375 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 DYNC2LI1Q8TCX1 351 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 PINX1Q96BK5 328 aaKnown RBP15.6■□□□□ 0.09
VSX1-201ENST00000376707 ZNF414Q96IQ9 312 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 RNF2Q99496 336 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 RHPN1-AS1Q9BWJ2 59 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 COPZ2Q9P299 210 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 RABL2AQ9UBK7 228 aaPredicted RBP15.6■□□□□ 0.09
VSX1-201ENST00000376707 RABL2BQ9UNT1 228 aa15.6■□□□□ 0.09
VSX1-201ENST00000376707 EPPK1P58107 5090 aaKnown RBP15.6■□□□□ 0.09
VSX1-201ENST00000376707 CTDSPLO15194 276 aa15.59■□□□□ 0.09
VSX1-201ENST00000376707 GNG7O60262 68 aa15.59■□□□□ 0.09
VSX1-201ENST00000376707 IGHV3-48P01763 117 aa15.59■□□□□ 0.09
VSX1-201ENST00000376707 RPL35AP18077 110 aaKnown RBP15.59■□□□□ 0.09
VSX1-201ENST00000376707 UCP1P25874 307 aa15.59■□□□□ 0.09
VSX1-201ENST00000376707 PMS2P11Q13670 270 aa15.59■□□□□ 0.09
VSX1-201ENST00000376707 SCGB2B2Q4G0G5 96 aa15.59■□□□□ 0.09
VSX1-201ENST00000376707 LYG2Q86SG7 212 aa15.59■□□□□ 0.09
VSX1-201ENST00000376707 GALNT14Q96FL9 552 aa15.59■□□□□ 0.09
VSX1-201ENST00000376707 C6orf62Q9GZU0 229 aaPredicted RBP15.59■□□□□ 0.09
VSX1-201ENST00000376707 NXF2Q9GZY0 626 aaKnown RBP15.59■□□□□ 0.09
VSX1-201ENST00000376707 IGHV3-49A0A0A0MS15 119 aa15.58■□□□□ 0.08
VSX1-201ENST00000376707 CHEK1O14757 476 aa15.58■□□□□ 0.08
VSX1-201ENST00000376707 AKR1C2P52895 323 aa15.58■□□□□ 0.08
VSX1-201ENST00000376707 TNFRSF9Q07011 255 aa15.58■□□□□ 0.08
VSX1-201ENST00000376707 MARCH1Q8TCQ1 289 aa15.58■□□□□ 0.08
VSX1-201ENST00000376707 OR10C1Q96KK4 312 aa15.58■□□□□ 0.08
VSX1-201ENST00000376707 TRAV14DV4A0A0A6YYC5 116 aa15.57■□□□□ 0.08
VSX1-201ENST00000376707 ST8SIA3O43173 380 aa15.57■□□□□ 0.08
VSX1-201ENST00000376707 TFPI2P48307 235 aa15.57■□□□□ 0.08
VSX1-201ENST00000376707 SURF2Q15527 256 aaPredicted RBP15.57■□□□□ 0.08
VSX1-201ENST00000376707 TRIM16LQ309B1 348 aa15.57■□□□□ 0.08
VSX1-201ENST00000376707 SP6Q3SY56 376 aa15.57■□□□□ 0.08
VSX1-201ENST00000376707 SPINK9Q5DT21 86 aa15.57■□□□□ 0.08
VSX1-201ENST00000376707 PVRIGQ6DKI7 326 aa15.57■□□□□ 0.08
VSX1-201ENST00000376707 APRG1Q8IVJ8 170 aa15.57■□□□□ 0.08
VSX1-201ENST00000376707 RNF183Q96D59 192 aa15.57■□□□□ 0.08
VSX1-201ENST00000376707 DIRAS2Q96HU8 199 aa15.57■□□□□ 0.08
VSX1-201ENST00000376707 HYDINQ4G0P3 5121 aa15.57■□□□□ 0.08
VSX1-201ENST00000376707 IGKV3-7A0A075B6H7 116 aa15.56■□□□□ 0.08
VSX1-201ENST00000376707 SNCAP37840 140 aa15.56■□□□□ 0.08
VSX1-201ENST00000376707 CMC4P56277 68 aaPredicted RBP15.56■□□□□ 0.08
VSX1-201ENST00000376707 FAAP20Q6NZ36 180 aa15.56■□□□□ 0.08
VSX1-201ENST00000376707 SLC35G3Q8N808 338 aa15.56■□□□□ 0.08
VSX1-201ENST00000376707 GINS3Q9BRX5 216 aa15.56■□□□□ 0.08
VSX1-201ENST00000376707 RTBDNQ9BSG5 229 aaPredicted RBP15.56■□□□□ 0.08
VSX1-201ENST00000376707 TMEM222Q9H0R3 208 aa15.56■□□□□ 0.08
VSX1-201ENST00000376707 MAP6D1Q9H9H5 199 aa15.56■□□□□ 0.08
VSX1-201ENST00000376707 NUPR2A6NF83 97 aa15.55■□□□□ 0.08
VSX1-201ENST00000376707 DISC1C4P0D8 188 aa15.55■□□□□ 0.08
VSX1-201ENST00000376707 CDS2O95674 445 aa15.55■□□□□ 0.08
VSX1-201ENST00000376707 RPL5P46777 297 aaKnown RBP15.55■□□□□ 0.08
VSX1-201ENST00000376707 NPBWR1P48145 328 aa15.55■□□□□ 0.08
VSX1-201ENST00000376707 EWSR1Q01844 656 aaKnown RBP eCLIP15.55■□□□□ 0.08
VSX1-201ENST00000376707 IL18Q14116 193 aa15.55■□□□□ 0.08
VSX1-201ENST00000376707 AARDQ4LEZ3 155 aa15.55■□□□□ 0.08
VSX1-201ENST00000376707 RRNAD1Q96FB5 475 aaKnown RBP15.55■□□□□ 0.08
VSX1-201ENST00000376707 SLIRPQ9GZT3 109 aaKnown RBP15.55■□□□□ 0.08
VSX1-201ENST00000376707 IGHV3OR16-13A0A075B7E8 117 aa15.54■□□□□ 0.08
VSX1-201ENST00000376707 IGHV3-74A0A0B4J1X5 117 aa15.54■□□□□ 0.08
VSX1-201ENST00000376707 A0A0G2JRQ6 117 aa15.54■□□□□ 0.08
VSX1-201ENST00000376707 IFNA17P01571 189 aa15.54■□□□□ 0.08
VSX1-201ENST00000376707 AKAIN1P0CW23 69 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms