RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 IGHV3-49A0A0A0MS15 119 aa10.55□□□□□ -0.72
NELFE-201ENST00000375425 TRAV14DV4A0A0A6YYC5 116 aa10.55□□□□□ -0.72
NELFE-201ENST00000375425 IGHV7-4-1A0A0J9YVY3 117 aa10.55□□□□□ -0.72
NELFE-201ENST00000375425 C3orf85A0A1B0GTC6 90 aa10.55□□□□□ -0.72
NELFE-201ENST00000375425 GNG7O60262 68 aa10.55□□□□□ -0.72
NELFE-201ENST00000375425 SMIM18P0DKX4 95 aa10.55□□□□□ -0.72
NELFE-201ENST00000375425 Q6ZWC4 215 aa10.55□□□□□ -0.72
NELFE-201ENST00000375425 OR4D10Q8NGI6 311 aa10.55□□□□□ -0.72
NELFE-201ENST00000375425 TERB2Q8NHR7 220 aa10.55□□□□□ -0.72
NELFE-201ENST00000375425 KMT2AQ03164 3969 aa10.55□□□□□ -0.72
NELFE-201ENST00000375425 SPRY2O43597 315 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 IFNA17P01571 189 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 TBPP20226 339 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 BMI1P35226 326 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 SNCAP37840 140 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 AKR1C2P52895 323 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 PPP5CP53041 499 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 SP6Q3SY56 376 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 SCGB2B2Q4G0G5 96 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 WFDC3Q8IUB2 231 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 C15orf40Q8WUR7 153 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 COPZ2Q9P299 210 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 TP53TG1Q9Y2A0 90 aa10.54□□□□□ -0.72
NELFE-201ENST00000375425 IGKV3-7A0A075B6H7 116 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 IGHV3OR16-13A0A075B7E8 117 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 IGHV3-74A0A0B4J1X5 117 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 KIR2DL5BA0A0G2JN68 375 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 KIR2DL5BA0A0G2JPC4 375 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 A0A0J9YWU9 116 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 UBE2CO00762 179 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 ST8SIA3O43173 380 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 ATG12O94817 140 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 CD74P04233 296 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 P0C879 139 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 RPL35AP18077 110 aaKnown RBP10.53□□□□□ -0.72
NELFE-201ENST00000375425 ETV6P41212 452 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 NPBWR1P48145 328 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 TFPI2P48307 235 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 TAS2R19P59542 299 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 TRIM16LQ309B1 348 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 DEFB135Q30KP9 77 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 APRG1Q8IVJ8 170 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 KIR2DL5AQ8N109 375 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 STPG3Q8N7X2 389 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 TMEM229BQ8NBD8 167 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 DUSP18Q8NEJ0 188 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 KIR2DL5BQ8NHK3 375 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 ZFAND1Q8TCF1 268 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 GALNT14Q96FL9 552 aa10.53□□□□□ -0.72
NELFE-201ENST00000375425 INS-IGF2F8WCM5 200 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 RGS5O15539 181 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 RAB3DO95716 219 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 ZNF124Q15973 351 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 FAM90A2PQ658T7 463 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 TOMM20LQ6UXN7 152 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 SLC35G3Q8N808 338 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 CCDC71LQ8N9Z2 235 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 OR13C8Q8NGS7 320 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 MARCH1Q8TCQ1 289 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 RNF183Q96D59 192 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 PDCD10Q9BUL8 212 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 MIXL1Q9H2W2 232 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 MAP6D1Q9H9H5 199 aa10.52□□□□□ -0.73
NELFE-201ENST00000375425 GABARAPH6UMI1 98 aa10.51□□□□□ -0.73
NELFE-201ENST00000375425 CTDSP2O14595 271 aa10.51□□□□□ -0.73
NELFE-201ENST00000375425 TMEM50AO95807 157 aa10.51□□□□□ -0.73
NELFE-201ENST00000375425 UCP1P25874 307 aa10.51□□□□□ -0.73
NELFE-201ENST00000375425 CMC4P56277 68 aaPredicted RBP10.51□□□□□ -0.73
NELFE-201ENST00000375425 EWSR1Q01844 656 aaKnown RBP eCLIP10.51□□□□□ -0.73
NELFE-201ENST00000375425 TNFRSF9Q07011 255 aa10.51□□□□□ -0.73
NELFE-201ENST00000375425 STEAP1BQ6NZ63 245 aa10.51□□□□□ -0.73
NELFE-201ENST00000375425 LYG2Q86SG7 212 aa10.51□□□□□ -0.73
NELFE-201ENST00000375425 LILRB2Q8N423 598 aa10.51□□□□□ -0.73
NELFE-201ENST00000375425 GBGT1Q8N5D6 347 aa10.51□□□□□ -0.73
NELFE-201ENST00000375425 RRNAD1Q96FB5 475 aaKnown RBP10.51□□□□□ -0.73
NELFE-201ENST00000375425 A0A0G2JRQ6 117 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 APOHP02749 345 aaPredicted RBP10.5□□□□□ -0.73
NELFE-201ENST00000375425 RNASE2P10153 161 aaKnown RBP10.5□□□□□ -0.73
NELFE-201ENST00000375425 SUB1P53999 127 aaKnown RBP eCLIP10.5□□□□□ -0.73
NELFE-201ENST00000375425 PAFAH1B2P68402 229 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 MLANAQ16655 118 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 PVRIGQ6DKI7 326 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 FAAP20Q6NZ36 180 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 Q6ZRM9 215 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 GPR141Q7Z602 305 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 GINS3Q9BRX5 216 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 MRPS26Q9BYN8 205 aaKnown RBP10.5□□□□□ -0.73
NELFE-201ENST00000375425 C6orf62Q9GZU0 229 aaPredicted RBP10.5□□□□□ -0.73
NELFE-201ENST00000375425 ENY2Q9NPA8 101 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 PUS1Q9Y606 427 aaKnown RBP eCLIP10.5□□□□□ -0.73
NELFE-201ENST00000375425 BIRC6Q9NR09 4857 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 CXorf65A6NEN9 183 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 B3GALNT1O75752 331 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 ALDH3B2P48448 385 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 HOXA1P49639 335 aaPredicted RBP10.5□□□□□ -0.73
NELFE-201ENST00000375425 SSBP1Q04837 148 aaKnown RBP10.5□□□□□ -0.73
NELFE-201ENST00000375425 PMS2P11Q13670 270 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 SPCS2Q15005 226 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 ZNF600Q6ZNG1 722 aa10.5□□□□□ -0.73
NELFE-201ENST00000375425 TCF24Q7RTU0 167 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms