RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 CFIP05156 583 aa16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 GDF1P27539 372 aa16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 YRDCQ86U90 279 aaKnown RBP16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 PILRBQ9UKJ0 227 aa16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 HCFC1P51610 2035 aa16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 TET2Q6N021 2002 aaPredicted RBP16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 FREM1Q5H8C1 2179 aa16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 VWC2LB2RUY7 222 aa16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 IGFBP2P18065 325 aa16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 SEC11AP67812 179 aa16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 VKORC1L1Q8N0U8 176 aa16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 FAM216AQ8WUB2 273 aa16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 SNRNP40Q96DI7 357 aaKnown RBP16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 OR2V2Q96R30 315 aa16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 HSD17B10Q99714 261 aaKnown RBP16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 MS4A6AQ9H2W1 248 aa16.9■□□□□ 0.3
TMEFF1-201ENST00000374879 IGHV3-64DA0A0J9YX35 117 aa16.89■□□□□ 0.29
TMEFF1-201ENST00000374879 ZNF503-AS2A6NEH8 195 aa16.89■□□□□ 0.29
TMEFF1-201ENST00000374879 CEBPDP49716 269 aaPredicted RBP16.89■□□□□ 0.29
TMEFF1-201ENST00000374879 OR4A5Q8NH83 315 aa16.89■□□□□ 0.29
TMEFF1-201ENST00000374879 AZU1P20160 251 aa16.89■□□□□ 0.29
TMEFF1-201ENST00000374879 TRAT1Q6PIZ9 186 aa16.89■□□□□ 0.29
TMEFF1-201ENST00000374879 OR4A16Q8NH70 328 aa16.89■□□□□ 0.29
TMEFF1-201ENST00000374879 PLEKHA3Q9HB20 300 aa16.89■□□□□ 0.29
TMEFF1-201ENST00000374879 A0A0G2JMM0 328 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 A0A1W2PPB8 328 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 KIR3DP1A8MWS1 328 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 PRAMEF5Q5TYX0 476 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 PRAMEF6Q5VXH4 476 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 PMS2CLQ68D20 193 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 BPIFA4PQ86YQ2 179 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 TMEM251Q8N6I4 163 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 PLPPR2Q96GM1 343 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 PKIBQ9C010 78 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 GTSF1LQ9H1H1 148 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 SLC25A10Q9UBX3 287 aaPredicted RBP16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 HIGD1CA8MV81 97 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 COX8AP10176 69 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 PRR20EP86478 221 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 PRR20CP86479 221 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 PRR20DP86480 221 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 PRR20BP86481 221 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 PRR20AP86496 221 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 Q6ZR03 302 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 GRAMD2BQ96HH9 432 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 DUSP13Q9UII6 198 aa16.88■□□□□ 0.29
TMEFF1-201ENST00000374879 TRAV3A0A0B4J244 114 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 H3BRM9 83 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 B3GALT5-AS1P59052 145 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 OR2K2Q8NGT1 345 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 IGHV3-43A0A0B4J1X8 118 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 A0A1W2PRE2 83 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 J3QT63 122 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 SP9P0CG40 484 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 IGHV3-43DP0DP04 118 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 HIST1H1EP10412 219 aaKnown RBP16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 GGNQ86UU5 652 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 WDR31Q8NA23 367 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 NPFFR1Q9GZQ6 430 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 SMPXQ9UHP9 88 aa16.87■□□□□ 0.29
TMEFF1-201ENST00000374879 PPIAL4EA0A075B759 164 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 PPIAL4CA0A0B4J2A2 164 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 DEFB108AA8MXU0 73 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 SS18L1O75177 396 aaPredicted RBP16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 PPIAL4FP0DN26 164 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 PLP1P60201 277 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 OR10AG1Q8NH19 301 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 MAP1LC3CQ9BXW4 147 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 MPC1Q9Y5U8 109 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 PSPNO60542 156 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 FOXG1P55316 489 aaPredicted RBP16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 SMAGPQ0VAQ4 97 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 GUCD1Q96NT3 240 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 NABP2Q9BQ15 211 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 IDI2-AS1Q9NZ38 188 aa16.86■□□□□ 0.29
TMEFF1-201ENST00000374879 FCGR3BO75015 233 aa16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 FOLR3P41439 243 aa16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 Q8TCH9 128 aa16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 H1FXQ92522 213 aaKnown RBP16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 CHCHD1Q96BP2 118 aaKnown RBP16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 NCKAP5O14513 1909 aa16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 DNPH1O43598 174 aa16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 FAM162BQ5T6X4 162 aa16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 WDR86Q86TI4 376 aa16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 OR10D3Q8NH80 312 aa16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 JKAMPQ9P055 326 aa16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 PSG11Q9UQ72 335 aa16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 HILPDAQ9Y5L2 63 aa16.85■□□□□ 0.29
TMEFF1-201ENST00000374879 A0A0G2JLM5 398 aa16.84■□□□□ 0.29
TMEFF1-201ENST00000374879 ZNF138P52744 262 aa16.84■□□□□ 0.29
TMEFF1-201ENST00000374879 PATE3B3GLJ2 98 aa16.84■□□□□ 0.29
TMEFF1-201ENST00000374879 RFPL3SP0C7P2 107 aa16.84■□□□□ 0.29
TMEFF1-201ENST00000374879 AESQ08117 197 aa16.84■□□□□ 0.29
TMEFF1-201ENST00000374879 FOXF2Q12947 444 aa16.84■□□□□ 0.29
TMEFF1-201ENST00000374879 TIMM8BQ9Y5J9 83 aaPredicted RBP16.84■□□□□ 0.29
TMEFF1-201ENST00000374879 FRYQ5TBA9 3013 aa16.84■□□□□ 0.29
TMEFF1-201ENST00000374879 A0A1B0GXF2 115 aa16.83■□□□□ 0.29
TMEFF1-201ENST00000374879 NTN3O00634 580 aaPredicted RBP16.83■□□□□ 0.29
TMEFF1-201ENST00000374879 LRRC29Q8WV35 223 aa16.83■□□□□ 0.29
TMEFF1-201ENST00000374879 RAB37Q96AX2 223 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms