RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 ZDHHC8Q9ULC8 765 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 LRRK2Q5S007 2527 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 IGKV1-5P01602 117 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 ELOBQ15370 118 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 RSPO1Q2MKA7 263 aaPredicted RBP7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 OR4C5Q8NGB2 326 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 C18orf12Q96KH6 178 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 WIPF3A6NGB9 483 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 CCKARP32238 428 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 LOXL3P58215 753 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 B3GALT5-AS1P59052 145 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 HERPUD1Q15011 391 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 MBNL2Q5VZF2 373 aaKnown RBP7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 SPATA31B1PQ5VZV4 182 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 CLDND2Q8NHS1 167 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 REG4Q9BYZ8 158 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 ZNF430Q9H8G1 570 aaPredicted RBP7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 HSPB7Q9UBY9 170 aa7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 FOXA2Q9Y261 457 aaPredicted RBP7.58□□□□□ -1.2
SMARCA1-202ENST00000371122 IGHV3OR16-12A0A075B7B8 117 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 A0A1B0GV90 55 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 M0R143 59 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 IGHV3-11P01762 117 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 CXCL1P09341 107 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 NMUP48645 174 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 ZNF324BQ6AW86 544 aaPredicted RBP7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 FAM90A1Q86YD7 464 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 C1QL4Q86Z23 238 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 GBGT1Q8N5D6 347 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 GCSAMQ8N6F7 178 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 OR51M1Q9H341 326 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 PROK2Q9HC23 129 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 C10orf142B7Z368 130 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 SAA1P0DJI8 122 aaPredicted RBP7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 PRR30Q53SZ7 412 aaPredicted RBP7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 RPP25LQ8N5L8 163 aaKnown RBP7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 TCTEX1D1Q8N7M0 179 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 WFDC12Q8WWY7 111 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 C14orf144Q96I85 54 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 KCNS1Q96KK3 526 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 PKD1L2Q7Z442 2459 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 ELOA3CA0A087WX78 387 aaPredicted RBP7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 LY6G6EA0A0G2JKS1 128 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 KBTBD11-OT1A0A1B0GTJ5 212 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 SH2D7A6NKC9 451 aaPredicted RBP7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 LINC00473A8K010 186 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 HIST1H1EP10412 219 aaKnown RBP7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 RPL7P18124 248 aaKnown RBP7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 ADCYAP1P18509 176 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 TWIST1Q15672 202 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 MORN2Q502X0 79 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 ZNF506Q5JVG8 444 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 OR4B1Q8NGF8 309 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 SFRP2Q96HF1 295 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 TMEM56-RWDD3S4R434 201 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 U3KQA8 63 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 SMG1Q96Q15 3661 aaKnown RBP7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 IGKV1-6A0A0C4DH72 117 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 DLL1O00548 723 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 PPIFP30405 207 aaKnown RBP7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 CDX1P47902 265 aaPredicted RBP7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 SPANXN1Q5VSR9 72 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 WDR73Q6P4I2 378 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 DUX4L9Q6RFH8 374 aaPredicted RBP7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 C18orf15Q96N68 181 aa7.57□□□□□ -1.2
SMARCA1-202ENST00000371122 E9PQ18 207 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 IGKV1D-33P01593 117 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 IGKV1-33P01594 117 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 RPL23P62829 140 aaKnown RBP7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 ZNF497Q6ZNH5 498 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 IGFBPL1Q8WX77 278 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 C1orf147Q96MC9 270 aaPredicted RBP7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 PLSCR2Q9NRY7 297 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 CARHSP1Q9Y2V2 147 aaKnown RBP7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 C17orf100A8MU93 164 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 IQCF6A8MYZ5 107 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 HAX1O00165 279 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 MLNRO43193 412 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 TMEM50AO95807 157 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 BTF3P20290 206 aaKnown RBP7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 PPOXP50336 477 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 CD177Q8N6Q3 437 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 TMEM116Q8NCL8 245 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 STXBP6Q8NFX7 210 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 DPF1Q92782 380 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 FBLN5Q9UBX5 448 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 M0QZ24 198 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 WISP2O76076 250 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 OR4D5Q8NGN0 318 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 SPSB4Q96A44 273 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 RAB37Q96AX2 223 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 C1RLQ9NZP8 487 aa7.56□□□□□ -1.2
SMARCA1-202ENST00000371122 FASNP49327 2511 aaKnown RBP7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 OR4C46A6NHA9 309 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 FOXI3A8MTJ6 420 aaPredicted RBP7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 TCF21O43680 179 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 NBEAP1P0C6P0 100 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 SRP14P37108 136 aaKnown RBP7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 COMPP49747 757 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms