RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 RSPO3Q9BXY4 272 aaPredicted RBP13.3□□□□□ -0.28
COL17A1-202ENST00000369733 ELOVL5Q9NYP7 299 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 FAM90A2PQ658T7 463 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 MRPL14Q6P1L8 145 aaKnown RBP13.3□□□□□ -0.28
COL17A1-202ENST00000369733 STAG3L3P0CL85 134 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 Q6AWC8 147 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 TREML4Q6UXN2 200 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 ORMDL3Q8N138 153 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 MYLKQ15746 1914 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 SAA2-SAA4A0A096LPE2 208 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 PPIAL4CA0A0B4J2A2 164 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 FAM106CPP0CH98 169 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 SAA2P0DJI9 122 aaPredicted RBP13.3□□□□□ -0.28
COL17A1-202ENST00000369733 PPIAL4GP0DN37 164 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 C10orf91Q5T1B1 145 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 SPSB3Q6PJ21 355 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 CLEC7AQ9BXN2 247 aa13.3□□□□□ -0.28
COL17A1-202ENST00000369733 MRPL20Q9BYC9 149 aaKnown RBP13.3□□□□□ -0.28
COL17A1-202ENST00000369733 SPAARA0A1B0GVQ0 90 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 UPK2O00526 184 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 EREGO14944 169 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 IGHV2-70P01814 119 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 ATP1A1-AS1Q5TC04 95 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 RAXQ9Y2V3 346 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 TM4SF5O14894 197 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 YPEL1O60688 119 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 PRSS2P07478 247 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 PYYP10082 97 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 ZIC4Q8N9L1 334 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 ZNF418Q8TF45 676 aaPredicted RBP13.29□□□□□ -0.28
COL17A1-202ENST00000369733 YPEL2Q96QA6 119 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 IGKV1-5P01602 117 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 FAM216BQ8N7L0 139 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 DNAJC13O75165 2243 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 NPIPB11E5RHQ5 1161 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 TFF1P04155 84 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 SAA1P0DJI8 122 aaPredicted RBP13.29□□□□□ -0.28
COL17A1-202ENST00000369733 MEGF9Q9H1U4 602 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 ATP5LO75964 103 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 RIPPLY3P57055 190 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 MORN2Q502X0 79 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 SYT8Q8NBV8 401 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 EPDR1Q9UM22 224 aa13.29□□□□□ -0.28
COL17A1-202ENST00000369733 A8MWP6 167 aa13.28□□□□□ -0.28
COL17A1-202ENST00000369733 UMODP07911 640 aa13.28□□□□□ -0.28
COL17A1-202ENST00000369733 DNM1P46Q6ZS02 220 aa13.28□□□□□ -0.28
COL17A1-202ENST00000369733 CIARTQ8N365 385 aaPredicted RBP13.28□□□□□ -0.28
COL17A1-202ENST00000369733 C5orf24Q7Z6I8 188 aa13.28□□□□□ -0.28
COL17A1-202ENST00000369733 GGTLC1Q9BX51 225 aa13.28□□□□□ -0.28
COL17A1-202ENST00000369733 ST20Q9HBF5 79 aa13.28□□□□□ -0.28
COL17A1-202ENST00000369733 MRPS18CQ9Y3D5 142 aaKnown RBP13.28□□□□□ -0.28
COL17A1-202ENST00000369733 DUTP33316 252 aaKnown RBP13.28□□□□□ -0.28
COL17A1-202ENST00000369733 TDGF1P3P51864 188 aa13.28□□□□□ -0.28
COL17A1-202ENST00000369733 TMEM14EPQ6UXP3 125 aa13.28□□□□□ -0.28
COL17A1-202ENST00000369733 ZNF581Q9P0T4 197 aa13.28□□□□□ -0.28
COL17A1-202ENST00000369733 FAM181BA6NEQ2 426 aa13.28□□□□□ -0.28
COL17A1-202ENST00000369733 ADIPOQQ15848 244 aa13.28□□□□□ -0.28
COL17A1-202ENST00000369733 UBTD1Q9HAC8 227 aa13.28□□□□□ -0.28
COL17A1-202ENST00000369733 FAM90A9PA6NNJ1 464 aa13.27□□□□□ -0.28
COL17A1-202ENST00000369733 GLRXP35754 106 aa13.27□□□□□ -0.28
COL17A1-202ENST00000369733 PSMG4Q5JS54 123 aa13.27□□□□□ -0.28
COL17A1-202ENST00000369733 CHCHD1Q96BP2 118 aaKnown RBP13.27□□□□□ -0.28
COL17A1-202ENST00000369733 IGHV1-2P23083 117 aa13.27□□□□□ -0.28
COL17A1-202ENST00000369733 TSKUQ8WUA8 353 aa13.27□□□□□ -0.28
COL17A1-202ENST00000369733 LPAR2Q9HBW0 351 aa13.27□□□□□ -0.28
COL17A1-202ENST00000369733 OTORQ9NRC9 128 aa13.27□□□□□ -0.28
COL17A1-202ENST00000369733 IGHV3-35A0A0C4DH35 117 aa13.27□□□□□ -0.29
COL17A1-202ENST00000369733 SPATA31B1PQ5VZV4 182 aa13.27□□□□□ -0.29
COL17A1-202ENST00000369733 FAM90A1Q86YD7 464 aa13.27□□□□□ -0.29
COL17A1-202ENST00000369733 SS18L1O75177 396 aaPredicted RBP13.27□□□□□ -0.29
COL17A1-202ENST00000369733 AMMECR1LQ6DCA0 310 aa13.27□□□□□ -0.29
COL17A1-202ENST00000369733 OR4X2Q8NGF9 303 aa13.27□□□□□ -0.29
COL17A1-202ENST00000369733 SEMA5BQ9P283 1151 aa13.27□□□□□ -0.29
COL17A1-202ENST00000369733 ZNF257Q9Y2Q1 563 aa13.27□□□□□ -0.29
COL17A1-202ENST00000369733 A0A1W2PS18 150 aa13.26□□□□□ -0.29
COL17A1-202ENST00000369733 RAB9AP51151 201 aa13.26□□□□□ -0.29
COL17A1-202ENST00000369733 MRPL52Q86TS9 123 aaKnown RBP13.26□□□□□ -0.29
COL17A1-202ENST00000369733 FOXA2Q9Y261 457 aaPredicted RBP13.26□□□□□ -0.29
COL17A1-202ENST00000369733 IGHV2OR16-5A0A0B4J2B6 119 aa13.26□□□□□ -0.29
COL17A1-202ENST00000369733 LHX2P50458 406 aa13.26□□□□□ -0.29
COL17A1-202ENST00000369733 PNKDQ8N490 385 aa13.26□□□□□ -0.29
COL17A1-202ENST00000369733 ORAOV1Q8WV07 137 aa13.26□□□□□ -0.29
COL17A1-202ENST00000369733 C9JCJ5 164 aa13.26□□□□□ -0.29
COL17A1-202ENST00000369733 BEX4Q9NWD9 120 aaPredicted RBP13.26□□□□□ -0.29
COL17A1-202ENST00000369733 GPX1P07203 203 aa13.26□□□□□ -0.29
COL17A1-202ENST00000369733 CD33P20138 364 aa13.26□□□□□ -0.29
COL17A1-202ENST00000369733 FBXL15Q9H469 300 aa13.26□□□□□ -0.29
COL17A1-202ENST00000369733 S4R3C0 116 aa13.26□□□□□ -0.29
COL17A1-202ENST00000369733 FER1L6-AS1Q8NA97 138 aa13.26□□□□□ -0.29
COL17A1-202ENST00000369733 TYMSP04818 313 aa13.25□□□□□ -0.29
COL17A1-202ENST00000369733 CRIM1Q9NZV1 1036 aa13.25□□□□□ -0.29
COL17A1-202ENST00000369733 EMP1P54849 157 aa13.25□□□□□ -0.29
COL17A1-202ENST00000369733 BMPERQ8N8U9 685 aa13.25□□□□□ -0.29
COL17A1-202ENST00000369733 HEATR5BQ9P2D3 2071 aa13.25□□□□□ -0.29
COL17A1-202ENST00000369733 IGHV2-5P01817 119 aa13.25□□□□□ -0.29
COL17A1-202ENST00000369733 TSPOP30536 169 aa13.25□□□□□ -0.29
COL17A1-202ENST00000369733 LEPP41159 167 aa13.25□□□□□ -0.29
COL17A1-202ENST00000369733 ATP5L2Q7Z4Y8 100 aa13.25□□□□□ -0.29
COL17A1-202ENST00000369733 LOC102723996A0A087X1L8 192 aa13.25□□□□□ -0.29
COL17A1-202ENST00000369733 NUDT10Q8NFP7 164 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms