RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 MRPL32Q9BYC8 188 aaKnown RBP11.34□□□□□ -0.59
USF1-202ENST00000368020 PPIAL4CA0A0B4J2A2 164 aa11.33□□□□□ -0.6
USF1-202ENST00000368020 H7BYZ3 331 aa11.33□□□□□ -0.6
USF1-202ENST00000368020 LIPFP07098 398 aa11.33□□□□□ -0.6
USF1-202ENST00000368020 PPIAL4GP0DN37 164 aa11.33□□□□□ -0.6
USF1-202ENST00000368020 COL8A2P25067 703 aa11.33□□□□□ -0.6
USF1-202ENST00000368020 SNRPEP62304 92 aaKnown RBP11.33□□□□□ -0.6
USF1-202ENST00000368020 GAMTQ14353 236 aa11.33□□□□□ -0.6
USF1-202ENST00000368020 SLC16A13Q7RTY0 426 aa11.33□□□□□ -0.6
USF1-202ENST00000368020 UHRF2Q96PU4 802 aa11.33□□□□□ -0.6
USF1-202ENST00000368020 SSX3Q99909 188 aa11.33□□□□□ -0.6
USF1-202ENST00000368020 TECRQ9NZ01 308 aaKnown RBP11.33□□□□□ -0.6
USF1-202ENST00000368020 FUT9Q9Y231 359 aa11.33□□□□□ -0.6
USF1-202ENST00000368020 URGCP-MRPS24S4R325 110 aa11.33□□□□□ -0.6
USF1-202ENST00000368020 DOPEY2Q9Y3R5 2298 aa11.33□□□□□ -0.6
USF1-202ENST00000368020 ACTL6BO94805 426 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 IGHV2-5P01817 119 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 MYOD1P15172 320 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 AREGP15514 252 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 COMPP49747 757 aaPredicted RBP11.32□□□□□ -0.6
USF1-202ENST00000368020 OR4P4Q8NGL7 312 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 GATAD1Q8WUU5 269 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 ZNF430Q9H8G1 570 aaPredicted RBP11.32□□□□□ -0.6
USF1-202ENST00000368020 A6NNC1 897 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 BUB1B-PAK6H3BSN5 160 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 CORTO00230 105 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 EIF3GO75821 320 aaKnown RBP eCLIP11.32□□□□□ -0.6
USF1-202ENST00000368020 LINC00869P0C866 280 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 SRP14P37108 136 aaKnown RBP11.32□□□□□ -0.6
USF1-202ENST00000368020 SELENOTP62341 195 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 KIAA0141Q14154 515 aaPredicted RBP11.32□□□□□ -0.6
USF1-202ENST00000368020 ZNF343Q6P1L6 599 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 ZNF114Q8NC26 417 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 PFDN5Q99471 154 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 INSIG2Q9Y5U4 225 aa11.32□□□□□ -0.6
USF1-202ENST00000368020 TGIF2-C20orf24A0A0A6YYL0 155 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 SLC25A17O43808 307 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 S100A9P06702 114 aaKnown RBP11.31□□□□□ -0.6
USF1-202ENST00000368020 CXCL1P09341 107 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 OR5G3P0C626 314 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 DEFA4P12838 97 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 RPL35P42766 123 aaKnown RBP11.31□□□□□ -0.6
USF1-202ENST00000368020 UBE2G2P60604 165 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 FAM78BQ5VT40 261 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 KCNIP4Q6PIL6 250 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 C16orf82Q7Z2V1 217 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 LY6G5BQ8NDX9 201 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 OR10W1Q8NGF6 305 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 C22orf15Q8WYQ4 148 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 RPEQ96AT9 228 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 IMMP2LQ96T52 175 aa11.31□□□□□ -0.6
USF1-202ENST00000368020 SEPSECSQ9HD40 501 aaKnown RBP11.31□□□□□ -0.6
USF1-202ENST00000368020 IGHV1-3A0A0C4DH29 117 aa11.3□□□□□ -0.6
USF1-202ENST00000368020 M0R1W7 72 aa11.3□□□□□ -0.6
USF1-202ENST00000368020 ENSAO43768 121 aaKnown RBP11.3□□□□□ -0.6
USF1-202ENST00000368020 SMIM6P0DI80 62 aa11.3□□□□□ -0.6
USF1-202ENST00000368020 OR10J1P30954 320 aa11.3□□□□□ -0.6
USF1-202ENST00000368020 C11orf71Q6IPW1 123 aa11.3□□□□□ -0.6
USF1-202ENST00000368020 OR1L4Q8NGR5 311 aa11.3□□□□□ -0.6
USF1-202ENST00000368020 C11orf52Q96A22 123 aa11.3□□□□□ -0.6
USF1-202ENST00000368020 SRSF8Q9BRL6 282 aaKnown RBP11.3□□□□□ -0.6
USF1-202ENST00000368020 LY96Q9Y6Y9 160 aa11.3□□□□□ -0.6
USF1-202ENST00000368020 CEACAM3P40198 252 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 GALR1P47211 349 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 ATP5G3P48201 142 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 BPIFB3P59826 476 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 GNB1P62873 340 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 PAX2Q02962 417 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 FABP9Q0Z7S8 132 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 DIAPH2-AS1Q14236 149 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 DTX2Q86UW9 622 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 PYGO2Q9BRQ0 406 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 AKAP6Q13023 2319 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 TENM4Q6N022 2769 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 NDUFB4O95168 129 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 RPL27AP46776 148 aaKnown RBP11.29□□□□□ -0.6
USF1-202ENST00000368020 LCN2P80188 198 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 WT1-ASQ06250 92 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 PRSS8Q16651 343 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 PVRIGQ6DKI7 326 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 LINC01551Q86U37 167 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 THAP8Q8NA92 274 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 OR51G1Q8NGK1 321 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 SRD5A3Q9H8P0 318 aa11.29□□□□□ -0.6
USF1-202ENST00000368020 IGKV1OR2-108A0A075B7D4 117 aa11.28□□□□□ -0.6
USF1-202ENST00000368020 ZNF98A6NK75 572 aa11.28□□□□□ -0.6
USF1-202ENST00000368020 C9JCJ5 164 aa11.28□□□□□ -0.6
USF1-202ENST00000368020 LYNX1G3V0Z9 82 aa11.28□□□□□ -0.6
USF1-202ENST00000368020 CRYGBP07316 175 aa11.28□□□□□ -0.6
USF1-202ENST00000368020 PFN1P07737 140 aaKnown RBP11.28□□□□□ -0.6
USF1-202ENST00000368020 LYNX1P0DP58 116 aa11.28□□□□□ -0.6
USF1-202ENST00000368020 MEOX2P50222 304 aa11.28□□□□□ -0.6
USF1-202ENST00000368020 FAM3BP58499 235 aaPredicted RBP11.28□□□□□ -0.6
USF1-202ENST00000368020 MOB3BQ86TA1 216 aa11.28□□□□□ -0.6
USF1-202ENST00000368020 MALRD1Q5VYJ5 2156 aa11.27□□□□□ -0.6
USF1-202ENST00000368020 ELOA3CA0A087WX78 387 aaPredicted RBP11.27□□□□□ -0.61
USF1-202ENST00000368020 A0A1W2PPI3 338 aa11.27□□□□□ -0.61
USF1-202ENST00000368020 TCRBV4S1A1TA0A5B7 111 aa11.27□□□□□ -0.61
USF1-202ENST00000368020 PPP5D1E7EU14 171 aa11.27□□□□□ -0.61
USF1-202ENST00000368020 C8orf88P0DMB2 117 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms