RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 SEPSECSQ9HD40 501 aaKnown RBP13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 IFNL4K9M1U5 179 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 Q5PR19 223 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 BHLHA15Q7RTS1 189 aaPredicted RBP13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 DEFB124Q8NES8 71 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 NUDT10Q8NFP7 164 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 JKAMPQ9P055 326 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 SOX21Q9Y651 276 aaPredicted RBP13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 SELENOKQ9Y6D0 94 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 A0A1W2PRD5 423 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 A0A1W2PRF3 423 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 A0A1W2PRM7 423 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 J3QW42 95 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 ZNRF1Q8ND25 227 aa13.34□□□□□ -0.27
CLSTN1-201ENST00000361311 IGKV1-6A0A0C4DH72 117 aa13.33□□□□□ -0.27
CLSTN1-201ENST00000361311 IGKV1D-33P01593 117 aa13.33□□□□□ -0.27
CLSTN1-201ENST00000361311 IGKV1-33P01594 117 aa13.33□□□□□ -0.27
CLSTN1-201ENST00000361311 IGLC2P0DOY2 106 aa13.33□□□□□ -0.27
CLSTN1-201ENST00000361311 IGLC3P0DOY3 106 aa13.33□□□□□ -0.27
CLSTN1-201ENST00000361311 OR2K2Q8NGT1 345 aa13.33□□□□□ -0.27
CLSTN1-201ENST00000361311 MRPS16Q9Y3D3 137 aaKnown RBP13.33□□□□□ -0.27
CLSTN1-201ENST00000361311 H3BVH4 76 aa13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 RPL7P18124 248 aaKnown RBP13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 LYPD6Q86Y78 171 aa13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 GPR82Q96P67 336 aa13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 ACACAQ13085 2346 aa13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 LOC107984156A0A0G2JMH3 177 aa13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 A0A1B0GUT8 65 aa13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 NCBP2LA6PVI3 153 aaKnown RBP13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 PSG1P11464 419 aa13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 ARL17AQ8IVW1 177 aa13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 PI4KAP42356 2102 aa13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 MOSP00540 346 aa13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 RBPMS2Q6ZRY4 209 aaKnown RBP13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 HIST1H4GQ99525 98 aa13.33□□□□□ -0.28
CLSTN1-201ENST00000361311 ITGB1BP1O14713 200 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 TDGF1P13385 188 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 PSMB2P49721 201 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 ITLN1Q8WWA0 313 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 CYYR1Q96J86 154 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 KIR2DL5BA0A0G2JN68 375 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 KIR2DL5BA0A0G2JPC4 375 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 ZNF585BQ52M93 769 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 TPTE2P1Q5T6R2 138 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 KIR2DL5AQ8N109 375 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 C5orf30Q96GV9 206 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 IMMP1LQ96LU5 166 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 CLEC7AQ9BXN2 247 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 A0A1W2PS18 150 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 SLC25A17O43808 307 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 C20orf204Q6ZNR8 217 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 FAM214BQ7L5A3 538 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 LY96Q9Y6Y9 160 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 REG1AP05451 166 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 SMIM17P0DL12 118 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 YPEL3P61236 119 aaPredicted RBP13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 CFHR1Q03591 330 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 MGST2Q99735 147 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 IDI2-AS1Q9NZ38 188 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 INSIG2Q9Y5U4 225 aa13.32□□□□□ -0.28
CLSTN1-201ENST00000361311 DENND4CQ5VZ89 1909 aa13.31□□□□□ -0.28
CLSTN1-201ENST00000361311 PSG7Q13046 419 aa13.31□□□□□ -0.28
CLSTN1-201ENST00000361311 IGHV3-72A0A0B4J1Y9 119 aa13.31□□□□□ -0.28
CLSTN1-201ENST00000361311 GFRA1P56159 465 aa13.31□□□□□ -0.28
CLSTN1-201ENST00000361311 TSKUQ8WUA8 353 aa13.31□□□□□ -0.28
CLSTN1-201ENST00000361311 CELA3AP09093 270 aa13.31□□□□□ -0.28
CLSTN1-201ENST00000361311 DUTP33316 252 aaKnown RBP13.31□□□□□ -0.28
CLSTN1-201ENST00000361311 HS3ST6Q96QI5 342 aa13.31□□□□□ -0.28
CLSTN1-201ENST00000361311 PYGO2Q9BRQ0 406 aa13.31□□□□□ -0.28
CLSTN1-201ENST00000361311 MAP1LC3AQ9H492 121 aa13.31□□□□□ -0.28
CLSTN1-201ENST00000361311 hDV102S1A0JD36 115 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 IGLV3-19P01714 112 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 RPL13AP40429 203 aaKnown RBP13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 SEC11AP67812 179 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 TEX43Q6ZNM6 134 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 STPG4Q8N801 248 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 TRBV6-6A0A0A6YYG2 114 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 GNG5P63218 68 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 ZNF714Q96N38 554 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 C18orf15Q96N68 181 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 MRPL27Q9P0M9 148 aaKnown RBP13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 PYYP10082 97 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 C15orf61A6NNL5 157 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 FOXH1O75593 365 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 CD40P25942 277 aa13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 MRPL14Q6P1L8 145 aaKnown RBP13.3□□□□□ -0.28
CLSTN1-201ENST00000361311 GAGE12BA1L429 117 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 C15orf62A8K5M9 175 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 PRRG2O14669 202 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 AREGP15514 252 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 SPTBN1Q01082 2364 aaKnown RBP13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 ZNF407Q9C0G0 2248 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 FOXF2Q12947 444 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 NAA38Q9BRA0 125 aaKnown RBP13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 ZNF257Q9Y2Q1 563 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 TFF1P04155 84 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 PRR31Q5SQ13 230 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 TMEM108Q6UXF1 575 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 OR52E5Q8NH55 327 aa13.29□□□□□ -0.28
CLSTN1-201ENST00000361311 CACNG8Q8WXS5 425 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms