RNA–Protein interactions for RNA: ENST00000359052.8

SMARCAD1-202, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene SMARCAD1, Length 5,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-202ENST00000359052 IGKV1D-43A0A0B4J1Z2 117 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR4C45A6NMZ5 311 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 CDRT1O95170 752 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 WARSP23381 471 aaKnown RBP1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 NFYAP23511 347 aaPredicted RBP1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 OMPP47874 163 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 CALCOCO2Q13137 446 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR5I1Q13606 314 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 TMEM187Q14656 261 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 SPA17Q15506 151 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 BVES-AS1Q5T3Y7 98 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 GDF5OSQ5U4N7 250 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 C9orf57Q5W0N0 161 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 NCBP2-AS2Q69YL0 99 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 MORN3Q6PF18 240 aaPredicted RBP1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 LRRN1Q6UXK5 716 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 NEK7Q8TDX7 302 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 ELSPBP1Q96BH3 223 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR2J1Q9GZK6 312 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 MS4A6AQ9H2W1 248 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR52D1Q9H346 318 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 REEP1Q9H902 201 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 BEX1Q9HBH7 125 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 RETNQ9HD89 108 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 DNAJC27Q9NZQ0 273 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 SSR3Q9UNL2 185 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 NACAE9PAV3 2078 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 C7orf71A4D174 169 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 E7EQ34 232 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 SLC17A3O00476 420 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 SERPINI2O75830 405 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 IGLV3-27P01718 113 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 PATE4P0C8F1 98 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 TRGC1P0CF51 173 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 MPC1LP0DKB6 136 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 AK4P27144 223 aaPredicted RBP1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 CCR6P51684 374 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 TPI1P60174 286 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 NANOS2P60321 138 aaKnown RBP1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 MYL7Q01449 175 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 SS18Q15532 418 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 SRSF7Q16629 238 aaKnown RBP eCLIP1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 C12orf74Q32Q52 190 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 Q499Y3 187 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR6V1Q8N148 313 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 STX19Q8N4C7 294 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 JAGN1Q8N5M9 183 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 NPBQ8NG41 125 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 PIH1D2Q8WWB5 315 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 MAL2Q969L2 176 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 TSACCQ96A04 125 aaPredicted RBP1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 ADTRPQ96IZ2 230 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 MTFP1Q9UDX5 166 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 TENM1Q9UKZ4 2725 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 WI2-2373I1.2A0A1W2PRP0 233 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 C7orf77A4D0Y5 90 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 TAS2R31P59538 309 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 Q6AWC8 147 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 HBMQ6B0K9 141 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 FBXL22Q6P050 247 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 CNIH2Q6PI25 160 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 CLDND2Q8NHS1 167 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 SLC25A40Q8TBP6 338 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR52E6Q96RD3 313 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 GPR84Q9NQS5 396 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 PRTFDC1Q9NRG1 225 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 RAB22AQ9UL26 194 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 IGLV2-18A0A075B6J9 118 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 B4DEV8 164 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 H3BQ15 152 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 UBL3O95164 117 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 RAB3DO95716 219 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 KRTAP1-4P0C5Y4 121 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 UBE2D1P51668 147 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 KIAA1644Q3SXP7 199 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 SAMD4BQ5PRF9 694 aaKnown RBP1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 NOXRED1Q6NXP6 359 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 PHF5AQ7RTV0 110 aaKnown RBP1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 TMEM17Q86X19 198 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 OR52P1PQ8NH57 321 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 TCEAL3Q969E4 200 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 CABLES2Q9BTV7 478 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 COMMD5Q9GZQ3 224 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 SDF2L1Q9HCN8 221 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 PCTPQ9UKL6 214 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 SLC7A7Q9UM01 511 aa1.22□□□□□ -2.21
SMARCAD1-202ENST00000359052 FAAHO00519 579 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 RBP4P02753 201 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 MDH2P40926 338 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 TLE4Q04727 773 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 SBSNQ6UWP8 590 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 Q71RC1 249 aaPredicted RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 NAA40Q86UY6 237 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 PDZD9Q8IXQ8 264 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 MAPK1IP1LQ8NDC0 245 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 RNASE6Q93091 150 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 RPUSD4Q96CM3 377 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 PRAC1Q96KF2 57 aa1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 PARP12Q9H0J9 701 aaKnown RBP1.21□□□□□ -2.22
SMARCAD1-202ENST00000359052 PCBD2Q9H0N5 130 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms