RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 NPPCP23582 126 aa13.43□□□□□ -0.26
SAMM50-201ENST00000350028 RPL27AP46776 148 aaKnown RBP13.43□□□□□ -0.26
SAMM50-201ENST00000350028 ATP5G3P48201 142 aa13.43□□□□□ -0.26
SAMM50-201ENST00000350028 SPATA31B1PQ5VZV4 182 aa13.43□□□□□ -0.26
SAMM50-201ENST00000350028 ZNF343Q6P1L6 599 aa13.43□□□□□ -0.26
SAMM50-201ENST00000350028 SSBP3Q9BWW4 388 aaPredicted RBP13.43□□□□□ -0.26
SAMM50-201ENST00000350028 FUT9Q9Y231 359 aa13.43□□□□□ -0.26
SAMM50-201ENST00000350028 ANKHD1Q8IWZ3 2542 aaKnown RBP13.42□□□□□ -0.26
SAMM50-201ENST00000350028 ACTL6BO94805 426 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 RPS10P46783 165 aaKnown RBP13.42□□□□□ -0.26
SAMM50-201ENST00000350028 FAM78BQ5VT40 261 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 OR11H6Q8NGC7 330 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 SIGLEC9Q9Y336 463 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 CXCL1P09341 107 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 GNB1P62873 340 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 PRB3Q04118 309 aaPredicted RBP13.42□□□□□ -0.26
SAMM50-201ENST00000350028 TNXAQ16473 311 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 TPTE2P1Q5T6R2 138 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 PVRIGQ6DKI7 326 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 OR2T6Q8NHC8 308 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 RNF2Q99496 336 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 TECRQ9NZ01 308 aaKnown RBP13.42□□□□□ -0.26
SAMM50-201ENST00000350028 DOK5Q9P104 306 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 URGCP-MRPS24S4R325 110 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 ARL2-SNX15V9GYD0 113 aa13.42□□□□□ -0.26
SAMM50-201ENST00000350028 IGLC7A0M8Q6 106 aa13.41□□□□□ -0.26
SAMM50-201ENST00000350028 S100A6P06703 90 aa13.41□□□□□ -0.26
SAMM50-201ENST00000350028 OR5G3P0C626 314 aa13.41□□□□□ -0.26
SAMM50-201ENST00000350028 GNLYP22749 145 aa13.41□□□□□ -0.26
SAMM50-201ENST00000350028 HTR1DP28221 377 aa13.41□□□□□ -0.26
SAMM50-201ENST00000350028 GPR6P46095 362 aaPredicted RBP13.41□□□□□ -0.26
SAMM50-201ENST00000350028 ARF6P62330 175 aa13.41□□□□□ -0.26
SAMM50-201ENST00000350028 ETFRF1Q6IPR1 90 aa13.41□□□□□ -0.26
SAMM50-201ENST00000350028 MIR17HGQ75NE6 70 aa13.41□□□□□ -0.26
SAMM50-201ENST00000350028 ZNF114Q8NC26 417 aa13.41□□□□□ -0.26
SAMM50-201ENST00000350028 ACY3Q96HD9 319 aa13.41□□□□□ -0.26
SAMM50-201ENST00000350028 TMEM167BQ9NRX6 74 aa13.41□□□□□ -0.26
SAMM50-201ENST00000350028 DPM3Q9P2X0 92 aa13.41□□□□□ -0.26
SAMM50-201ENST00000350028 TGOLN2O43493 480 aa13.4□□□□□ -0.26
SAMM50-201ENST00000350028 PRTN3P24158 256 aa13.4□□□□□ -0.26
SAMM50-201ENST00000350028 CNTFRP26992 372 aa13.4□□□□□ -0.26
SAMM50-201ENST00000350028 CEACAM3P40198 252 aa13.4□□□□□ -0.26
SAMM50-201ENST00000350028 TAS2R45P59539 299 aa13.4□□□□□ -0.26
SAMM50-201ENST00000350028 C1orf122Q6ZSJ8 110 aa13.4□□□□□ -0.26
SAMM50-201ENST00000350028 PPP1R27Q86WC6 154 aa13.4□□□□□ -0.26
SAMM50-201ENST00000350028 THAP8Q8NA92 274 aa13.4□□□□□ -0.26
SAMM50-201ENST00000350028 ANAPC16Q96DE5 110 aa13.4□□□□□ -0.26
SAMM50-201ENST00000350028 MRPL32Q9BYC8 188 aaKnown RBP13.4□□□□□ -0.26
SAMM50-201ENST00000350028 FNDC4Q9H6D8 234 aaPredicted RBP13.4□□□□□ -0.26
SAMM50-201ENST00000350028 METTL1Q9UBP6 276 aaKnown RBP13.4□□□□□ -0.26
SAMM50-201ENST00000350028 HIVEP3Q5T1R4 2406 aa13.4□□□□□ -0.27
SAMM50-201ENST00000350028 TGIF2-C20orf24A0A0A6YYL0 155 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 A0A1W2PPR1 153 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 A6NNC1 897 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 FOXH1O75593 365 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 NDUFB4O95168 129 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 COMPP49747 757 aaPredicted RBP13.39□□□□□ -0.27
SAMM50-201ENST00000350028 PQLC2Q6ZP29 291 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 C16orf82Q7Z2V1 217 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 TRBV24-1A0A075B6N3 115 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 C5orf52A6NGY3 159 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 AREGP15514 252 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 GATA2P23769 480 aaPredicted RBP13.39□□□□□ -0.27
SAMM50-201ENST00000350028 UQCRFS1P47985 274 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 SELENOTP62341 195 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 KIR3DL3Q8N743 410 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 OR51G1Q8NGK1 321 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 NPIPB3Q92617 1050 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 FAM210BQ96KR6 192 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 UHRF2Q96PU4 802 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 UBTD1Q9HAC8 227 aa13.39□□□□□ -0.27
SAMM50-201ENST00000350028 YTHDF2Q9Y5A9 579 aaKnown RBP13.39□□□□□ -0.27
SAMM50-201ENST00000350028 FLNCQ14315 2725 aa13.38□□□□□ -0.27
SAMM50-201ENST00000350028 ZNF462Q96JM2 2506 aa13.38□□□□□ -0.27
SAMM50-201ENST00000350028 TCRBV4S1A1TA0A5B7 111 aa13.38□□□□□ -0.27
SAMM50-201ENST00000350028 H7BYZ3 331 aa13.38□□□□□ -0.27
SAMM50-201ENST00000350028 CORTO00230 105 aa13.38□□□□□ -0.27
SAMM50-201ENST00000350028 CRYGCP07315 174 aa13.38□□□□□ -0.27
SAMM50-201ENST00000350028 CDKN1AP38936 164 aa13.38□□□□□ -0.27
SAMM50-201ENST00000350028 SNRPEP62304 92 aaKnown RBP13.38□□□□□ -0.27
SAMM50-201ENST00000350028 ODF3BA8MYP8 253 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 TIMM23O14925 209 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 REG1AP05451 166 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 C8orf88P0DMB2 117 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 EFNA4P52798 201 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 PAX2Q02962 417 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 KIAA0141Q14154 515 aaPredicted RBP13.37□□□□□ -0.27
SAMM50-201ENST00000350028 OR1L4Q8NGR5 311 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 OR1P1Q8NH06 330 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 OR5B12Q96R08 314 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 SSX3Q99909 188 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 SRSF8Q9BRL6 282 aaKnown RBP13.37□□□□□ -0.27
SAMM50-201ENST00000350028 FBXL15Q9H469 300 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 DNAJC4Q9NNZ3 241 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 ABCA4P78363 2273 aa13.37□□□□□ -0.27
SAMM50-201ENST00000350028 PFN1P07737 140 aaKnown RBP13.36□□□□□ -0.27
SAMM50-201ENST00000350028 S100PP25815 95 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 AKR1D1P51857 326 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 LDLRAD2Q5SZI1 272 aa13.36□□□□□ -0.27
SAMM50-201ENST00000350028 HCP5Q6MZN7 132 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms