RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 IGHV4-31P0DP07 118 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 HTR1DP28221 377 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 UBE2E1P51965 193 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 TPTE2P1Q5T6R2 138 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 GFI1BQ5VTD9 330 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 VKORC1L1Q8N0U8 176 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 CIARTQ8N365 385 aaPredicted RBP11.83□□□□□ -0.52
CXCL12-201ENST00000343575 PIP4P2Q8N4L2 257 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 LINC01356Q8N9X3 169 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 FOXC2Q99958 501 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 PYGO2Q9BRQ0 406 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 PARD6GQ9BYG4 376 aaPredicted RBP11.83□□□□□ -0.52
CXCL12-201ENST00000343575 DPM3Q9P2X0 92 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 VAX2Q9UIW0 290 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 IL3RAP26951 378 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 RAB11AP62491 216 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 SERF2P84101 59 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 TMEM249Q2WGJ8 235 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 SCGB1C1Q8TD33 95 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 PINX1Q96BK5 328 aaKnown RBP11.83□□□□□ -0.52
CXCL12-201ENST00000343575 RITA1Q96K30 269 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 SLC35D1Q9NTN3 355 aa11.83□□□□□ -0.52
CXCL12-201ENST00000343575 IGHV3-72A0A0B4J1Y9 119 aa11.82□□□□□ -0.52
CXCL12-201ENST00000343575 MARCH11A6NNE9 402 aa11.82□□□□□ -0.52
CXCL12-201ENST00000343575 KIR2DS2P43631 304 aa11.82□□□□□ -0.52
CXCL12-201ENST00000343575 SLC25A24Q6NUK1 477 aa11.82□□□□□ -0.52
CXCL12-201ENST00000343575 OR1P1Q8NH06 330 aa11.82□□□□□ -0.52
CXCL12-201ENST00000343575 OR4S2Q8NH73 311 aa11.82□□□□□ -0.52
CXCL12-201ENST00000343575 R3HDM4Q96D70 268 aa11.82□□□□□ -0.52
CXCL12-201ENST00000343575 BTF3L4Q96K17 158 aa11.82□□□□□ -0.52
CXCL12-201ENST00000343575 PPP1R14DQ9NXH3 145 aa11.82□□□□□ -0.52
CXCL12-201ENST00000343575 GNG13Q9P2W3 67 aa11.82□□□□□ -0.52
CXCL12-201ENST00000343575 AMMECR1Q9Y4X0 333 aaPredicted RBP11.82□□□□□ -0.52
CXCL12-201ENST00000343575 CSPG4Q6UVK1 2322 aa11.81□□□□□ -0.52
CXCL12-201ENST00000343575 EPHA1P21709 976 aa11.81□□□□□ -0.52
CXCL12-201ENST00000343575 CXorf66Q5JRM2 361 aaPredicted RBP11.81□□□□□ -0.52
CXCL12-201ENST00000343575 RPEQ96AT9 228 aa11.81□□□□□ -0.52
CXCL12-201ENST00000343575 CACNG5Q9UF02 275 aa11.81□□□□□ -0.52
CXCL12-201ENST00000343575 NAT8Q9UHE5 227 aa11.81□□□□□ -0.52
CXCL12-201ENST00000343575 HILPDAQ9Y5L2 63 aa11.81□□□□□ -0.52
CXCL12-201ENST00000343575 TNCP24821 2201 aa11.81□□□□□ -0.52
CXCL12-201ENST00000343575 CST7O76096 145 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 IL6RP08887 468 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-201ENST00000343575 FBLN7Q53RD9 439 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 PDZD11Q5EBL8 140 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 CFHR4Q92496 578 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 NEU1Q99519 415 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 PRO1933Q9H354 126 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 C7orf69Q9H7B7 122 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 TRAV3A0A0B4J244 114 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 CHST1O43916 411 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 TGFAP01135 160 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 OR9G9P0C7N8 305 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 GZMBP10144 247 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 POU2AF1Q16633 256 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 TMEM177Q53S58 311 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 KLF17Q5JT82 389 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-201ENST00000343575 CENPVQ7Z7K6 275 aaPredicted RBP11.8□□□□□ -0.52
CXCL12-201ENST00000343575 MRPL52Q86TS9 123 aaKnown RBP11.8□□□□□ -0.52
CXCL12-201ENST00000343575 THNSL2Q86YJ6 484 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 OR4X1Q8NH49 305 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 OR5B12Q96R08 314 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 AKAP9Q99996 3911 aa11.8□□□□□ -0.52
CXCL12-201ENST00000343575 NOTCH2Q04721 2471 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 IGHV3OR16-10A0A075B7F0 116 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 PPP5D1E7EU14 171 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 TIMM23O14925 209 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 IGLV2-23P01705 113 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 AMBPP02760 352 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 IGHV4-38-2P0DP08 117 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 RAB4AP20338 218 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 SAA4P35542 130 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 FAM3BP58499 235 aaPredicted RBP11.79□□□□□ -0.52
CXCL12-201ENST00000343575 RTL8BQ17RB0 113 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 ACOT6Q3I5F7 207 aaPredicted RBP11.79□□□□□ -0.52
CXCL12-201ENST00000343575 MINOS1Q5TGZ0 78 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 CYP2G1PQ6ZSU1 146 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 PDPNQ86YL7 162 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 WASHC3Q9Y3C0 194 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 MINOS1-NBL1R4GNA1 71 aa11.79□□□□□ -0.52
CXCL12-201ENST00000343575 TRAV40A0A0B4J280 105 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 TMEM250H0YL14 139 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 TCAPO15273 167 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 NXPH3O95157 252 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 APOA2P02652 100 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 GATA3P23771 443 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 MC5RP33032 325 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 HBG1P69891 147 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 HBG2P69892 147 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 RUNX1Q01196 453 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 RUSC1-AS1Q66K80 236 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 MOB3BQ86TA1 216 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 TMEM217Q8N7C4 229 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 TMEM18Q96B42 140 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 MAGT1Q9H0U3 335 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 TMEM140Q9NV12 185 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 TBL2Q9Y4P3 447 aaKnown RBP11.78□□□□□ -0.52
CXCL12-201ENST00000343575 IGHV1-69DA0A0B4J2H0 117 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 NPFFO15130 113 aa11.78□□□□□ -0.52
CXCL12-201ENST00000343575 TMEM50AO95807 157 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms