RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 FRMD6-AS1P0C7T7 363 aa6.74□□□□□ -1.33
CAST-204ENST00000341926 GUSBP1Q15486 140 aa6.74□□□□□ -1.33
CAST-204ENST00000341926 PSMG4Q5JS54 123 aa6.74□□□□□ -1.33
CAST-204ENST00000341926 AMTNQ6UX39 209 aa6.74□□□□□ -1.33
CAST-204ENST00000341926 SMRP1Q8NCR6 262 aa6.74□□□□□ -1.33
CAST-204ENST00000341926 MDS2Q8NDY4 140 aa6.74□□□□□ -1.33
CAST-204ENST00000341926 NUP35Q8NFH5 326 aa6.74□□□□□ -1.33
CAST-204ENST00000341926 KLK6Q92876 244 aa6.74□□□□□ -1.33
CAST-204ENST00000341926 NUS1Q96E22 293 aa6.74□□□□□ -1.33
CAST-204ENST00000341926 C20orf173Q96LM9 149 aa6.74□□□□□ -1.33
CAST-204ENST00000341926 JPT2Q9H910 190 aa6.74□□□□□ -1.33
CAST-204ENST00000341926 FOXA2Q9Y261 457 aaPredicted RBP6.74□□□□□ -1.33
CAST-204ENST00000341926 DOCK9Q9BZ29 2069 aa6.74□□□□□ -1.33
CAST-204ENST00000341926 TEX50A0A1B0GTY4 177 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 C5orf49A4QMS7 147 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 PAGE4O60829 102 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 SLC25A14O95258 325 aaPredicted RBP6.73□□□□□ -1.33
CAST-204ENST00000341926 IGHMP01871 453 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 PIRTP0C851 137 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 RNPS1Q15287 305 aaKnown RBP6.73□□□□□ -1.33
CAST-204ENST00000341926 ARTNQ5T4W7 220 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 C1orf140Q5VVS0 124 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 SPACA3Q8IXA5 215 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 V9GYV3 84 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 GREB1Q4ZG55 1949 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 OOSP1A8MZH6 123 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 SSSCA1O60232 199 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 NBL1P41271 181 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 PFN3P60673 137 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 ID3Q02535 119 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 LINC01590Q5TEZ4 76 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 Q6ZT83 130 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 APRG1Q8IVJ8 170 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 SBSPONQ8IVN8 264 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 RPP25LQ8N5L8 163 aaKnown RBP6.73□□□□□ -1.33
CAST-204ENST00000341926 SUMF1Q8NBK3 374 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 RNASE7Q9H1E1 156 aaKnown RBP6.73□□□□□ -1.33
CAST-204ENST00000341926 TAS2R4Q9NYW5 299 aa6.73□□□□□ -1.33
CAST-204ENST00000341926 CHCHD2Q9Y6H1 151 aaPredicted RBP6.73□□□□□ -1.33
CAST-204ENST00000341926 SMIM28A0A1B0GU29 152 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 TMEM89A2RUT3 159 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 TMEM14DPA8MWL7 114 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 C9JCJ5 164 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 NKX2-2O95096 273 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 DSCR4P56555 118 aaPredicted RBP6.72□□□□□ -1.33
CAST-204ENST00000341926 VGLL4Q14135 290 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 RRN3P1Q2M238 152 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 WDR38Q5JTN6 314 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 C1orf195Q5TG92 126 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 LYSMD4Q5XG99 296 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.72□□□□□ -1.33
CAST-204ENST00000341926 TIMD4Q96H15 378 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 FAM60AQ9NP50 221 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 C20orf141Q9NUB4 165 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 IGHV1-24A0A0C4DH33 117 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 FRG2CA6NGY1 282 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 PGLYRP1O75594 196 aaPredicted RBP6.72□□□□□ -1.33
CAST-204ENST00000341926 NDUFB4O95168 129 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 LYPD3O95274 346 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 FXYD2P54710 66 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 FKBP1AP62942 108 aaKnown RBP6.72□□□□□ -1.33
CAST-204ENST00000341926 PFN4Q8NHR9 129 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 DEFB118Q96PH6 123 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 TMEM59Q9BXS4 323 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 ULBP3Q9BZM4 244 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 SLC25A10Q9UBX3 287 aaPredicted RBP6.72□□□□□ -1.33
CAST-204ENST00000341926 TP53TG1Q9Y2A0 90 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 TMEM14AQ9Y6G1 99 aa6.72□□□□□ -1.33
CAST-204ENST00000341926 TRBV20OR9-2A0A075B6H5 130 aa6.71□□□□□ -1.33
CAST-204ENST00000341926 FAM90A5PA8MXJ8 464 aa6.71□□□□□ -1.33
CAST-204ENST00000341926 VSIG8P0DPA2 414 aa6.71□□□□□ -1.33
CAST-204ENST00000341926 ZNF136P52737 540 aa6.71□□□□□ -1.33
CAST-204ENST00000341926 EFEMP1Q12805 493 aa6.71□□□□□ -1.33
CAST-204ENST00000341926 BCL6BQ8N143 479 aaPredicted RBP6.71□□□□□ -1.33
CAST-204ENST00000341926 DLX4Q92988 240 aaPredicted RBP6.71□□□□□ -1.33
CAST-204ENST00000341926 SLC25A39Q9BZJ4 359 aaPredicted RBP6.71□□□□□ -1.33
CAST-204ENST00000341926 TMEM222Q9H0R3 208 aa6.71□□□□□ -1.33
CAST-204ENST00000341926 SZT2Q5T011 3432 aa6.71□□□□□ -1.33
CAST-204ENST00000341926 KIAA1549Q9HCM3 1950 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 TRAV27A0A087WT01 109 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 A0A1B0GTH9 108 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 CT62P0C5K7 136 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 TMEFF1Q8IYR6 380 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 ZNF525Q8N782 197 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 C3orf56Q8N813 242 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 ZNF740Q8NDX6 193 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 ELSPBP1Q96BH3 223 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 DPH3Q96FX2 82 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 URB1-AS1Q96HZ7 61 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 OR10A2Q9H208 303 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 TMEM74BQ9NUR3 256 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 PKIGQ9Y2B9 76 aa6.71□□□□□ -1.34
CAST-204ENST00000341926 FAM236AA0A1B0GUQ0 79 aa6.7□□□□□ -1.34
CAST-204ENST00000341926 FAM236BA0A1B0GV22 79 aa6.7□□□□□ -1.34
CAST-204ENST00000341926 NDUFS7O75251 213 aa6.7□□□□□ -1.34
CAST-204ENST00000341926 NDUFB2O95178 105 aa6.7□□□□□ -1.34
CAST-204ENST00000341926 IGHG1P01857 330 aa6.7□□□□□ -1.34
CAST-204ENST00000341926 ATP5G1P05496 136 aa6.7□□□□□ -1.34
CAST-204ENST00000341926 IGFBP6P24592 240 aaPredicted RBP6.7□□□□□ -1.34
CAST-204ENST00000341926 ATP5G3P48201 142 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms