RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 TMEM144Q7Z5S9 345 aa15.33■□□□□ 0.04
RFTN1-201ENST00000334133 RALYQ9UKM9 306 aaKnown RBP15.33■□□□□ 0.04
RFTN1-201ENST00000334133 OSR1Q8TAX0 266 aaPredicted RBP15.33■□□□□ 0.04
RFTN1-201ENST00000334133 PACRGQ96M98 296 aaPredicted RBP15.33■□□□□ 0.04
RFTN1-201ENST00000334133 ZNF430Q9H8G1 570 aaPredicted RBP15.33■□□□□ 0.04
RFTN1-201ENST00000334133 IGHV3-21A0A0B4J1V1 117 aa15.32■□□□□ 0.04
RFTN1-201ENST00000334133 IGHV1-69-2A0A0G2JMI3 117 aa15.32■□□□□ 0.04
RFTN1-201ENST00000334133 MDFIC2A0A1B0GVS7 189 aa15.32■□□□□ 0.04
RFTN1-201ENST00000334133 K7EN84 100 aa15.32■□□□□ 0.04
RFTN1-201ENST00000334133 CRYBB3P26998 211 aa15.32■□□□□ 0.04
RFTN1-201ENST00000334133 CGB1A6NKQ9 187 aa15.32■□□□□ 0.04
RFTN1-201ENST00000334133 K7ENP7 123 aa15.32■□□□□ 0.04
RFTN1-201ENST00000334133 OR5B3Q8NH48 314 aa15.32■□□□□ 0.04
RFTN1-201ENST00000334133 IGFBPL1Q8WX77 278 aa15.32■□□□□ 0.04
RFTN1-201ENST00000334133 ZNF503Q96F45 646 aa15.32■□□□□ 0.04
RFTN1-201ENST00000334133 UHRF2Q96PU4 802 aa15.32■□□□□ 0.04
RFTN1-201ENST00000334133 NDUFA4L2Q9NRX3 87 aa15.32■□□□□ 0.04
RFTN1-201ENST00000334133 HRNRQ86YZ3 2850 aaPredicted RBP15.32■□□□□ 0.04
RFTN1-201ENST00000334133 VSTM5A8MXK1 200 aa15.31■□□□□ 0.04
RFTN1-201ENST00000334133 CNTFRP26992 372 aa15.31■□□□□ 0.04
RFTN1-201ENST00000334133 TMEM249Q2WGJ8 235 aa15.31■□□□□ 0.04
RFTN1-201ENST00000334133 TGIF2LXQ8IUE1 241 aa15.31■□□□□ 0.04
RFTN1-201ENST00000334133 GGCTO75223 188 aaKnown RBP15.31■□□□□ 0.04
RFTN1-201ENST00000334133 RUSC1-AS1Q66K80 236 aa15.31■□□□□ 0.04
RFTN1-201ENST00000334133 HCP5Q6MZN7 132 aa15.31■□□□□ 0.04
RFTN1-201ENST00000334133 KCNIP4Q6PIL6 250 aa15.31■□□□□ 0.04
RFTN1-201ENST00000334133 OR4C13Q8NGP0 309 aa15.31■□□□□ 0.04
RFTN1-201ENST00000334133 OR1L8Q8NGR8 309 aa15.31■□□□□ 0.04
RFTN1-201ENST00000334133 FNDC4Q9H6D8 234 aaPredicted RBP15.31■□□□□ 0.04
RFTN1-201ENST00000334133 MRPL36Q9P0J6 103 aaKnown RBP15.31■□□□□ 0.04
RFTN1-201ENST00000334133 PITPNC1Q9UKF7 332 aa15.31■□□□□ 0.04
RFTN1-201ENST00000334133 ELOA3CA0A087WX78 387 aaPredicted RBP15.3■□□□□ 0.04
RFTN1-201ENST00000334133 ZNF90Q03938 601 aa15.3■□□□□ 0.04
RFTN1-201ENST00000334133 CD69Q07108 199 aa15.3■□□□□ 0.04
RFTN1-201ENST00000334133 C2orf83Q53S99 150 aa15.3■□□□□ 0.04
RFTN1-201ENST00000334133 FKBP11Q9NYL4 201 aa15.3■□□□□ 0.04
RFTN1-201ENST00000334133 TNFRSF13BO14836 293 aaPredicted RBP15.3■□□□□ 0.04
RFTN1-201ENST00000334133 IGHV2-70P01814 119 aa15.3■□□□□ 0.04
RFTN1-201ENST00000334133 ERHP84090 104 aaKnown RBP15.3■□□□□ 0.04
RFTN1-201ENST00000334133 CDSNQ15517 529 aa15.3■□□□□ 0.04
RFTN1-201ENST00000334133 TGOLN2O43493 480 aa15.3■□□□□ 0.04
RFTN1-201ENST00000334133 FRMD6-AS1P0C7T7 363 aa15.3■□□□□ 0.04
RFTN1-201ENST00000334133 OR1P1Q8NH06 330 aa15.3■□□□□ 0.04
RFTN1-201ENST00000334133 NPIPB3Q92617 1050 aa15.3■□□□□ 0.04
RFTN1-201ENST00000334133 SPINK4O60575 86 aa15.29■□□□□ 0.04
RFTN1-201ENST00000334133 IGHV1-8P0DP01 117 aa15.29■□□□□ 0.04
RFTN1-201ENST00000334133 SRP14P37108 136 aaKnown RBP15.29■□□□□ 0.04
RFTN1-201ENST00000334133 TMEM177Q53S58 311 aa15.29■□□□□ 0.04
RFTN1-201ENST00000334133 CD3EP07766 207 aa15.29■□□□□ 0.04
RFTN1-201ENST00000334133 COX7A1P24310 79 aa15.29■□□□□ 0.04
RFTN1-201ENST00000334133 SUMO1P63165 101 aaKnown RBP15.29■□□□□ 0.04
RFTN1-201ENST00000334133 CTAG1AP78358 180 aa15.29■□□□□ 0.04
RFTN1-201ENST00000334133 TEX38Q6PEX7 206 aa15.29■□□□□ 0.04
RFTN1-201ENST00000334133 C11orf42Q8N5U0 333 aa15.29■□□□□ 0.04
RFTN1-201ENST00000334133 NGBQ9NPG2 151 aa15.29■□□□□ 0.04
RFTN1-201ENST00000334133 IGLV2-23P01705 113 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 TMEM155Q4W5P6 130 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 OR10G8Q8NGN5 311 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 ST6GALNAC6Q969X2 333 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 AMBPP02760 352 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 DLX6P56179 175 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 RBPJQ06330 500 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 ACTL10Q5JWF8 245 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 TMEM183AQ8IXX5 376 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 NHLRC2Q8NBF2 726 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 IMMP2LQ96T52 175 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 WASHC3Q9Y3C0 194 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 TRAPPC1Q9Y5R8 145 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 WNK2Q9Y3S1 2297 aa15.28■□□□□ 0.04
RFTN1-201ENST00000334133 APOBEC3AP31941 199 aaPredicted RBP15.27■□□□□ 0.04
RFTN1-201ENST00000334133 TMEM30BQ3MIR4 351 aa15.27■□□□□ 0.04
RFTN1-201ENST00000334133 PRO1933Q9H354 126 aa15.27■□□□□ 0.04
RFTN1-201ENST00000334133 COL12A1Q99715 3063 aa15.27■□□□□ 0.04
RFTN1-201ENST00000334133 GGTLC3B5MD39 225 aa15.27■□□□□ 0.04
RFTN1-201ENST00000334133 SIAH2O43255 324 aa15.27■□□□□ 0.04
RFTN1-201ENST00000334133 MT-CO2P00403 227 aa15.27■□□□□ 0.04
RFTN1-201ENST00000334133 PYYP10082 97 aa15.27■□□□□ 0.04
RFTN1-201ENST00000334133 USF1P22415 310 aaPredicted RBP15.27■□□□□ 0.04
RFTN1-201ENST00000334133 PQLC2Q6ZP29 291 aa15.27■□□□□ 0.04
RFTN1-201ENST00000334133 TMEM186Q96B77 213 aa15.27■□□□□ 0.04
RFTN1-201ENST00000334133 SLC35E1Q96K37 410 aa15.27■□□□□ 0.04
RFTN1-201ENST00000334133 DLL1O00548 723 aa15.27■□□□□ 0.03
RFTN1-201ENST00000334133 LINC00479Q96M42 142 aa15.27■□□□□ 0.03
RFTN1-201ENST00000334133 PFDN5Q99471 154 aa15.27■□□□□ 0.03
RFTN1-201ENST00000334133 TECRQ9NZ01 308 aaKnown RBP15.27■□□□□ 0.03
RFTN1-201ENST00000334133 SSUH2Q9Y2M2 353 aa15.27■□□□□ 0.03
RFTN1-201ENST00000334133 A0A1W2PPI3 338 aa15.26■□□□□ 0.03
RFTN1-201ENST00000334133 SLC35B1P78383 322 aa15.26■□□□□ 0.03
RFTN1-201ENST00000334133 FXYD3Q14802 87 aa15.26■□□□□ 0.03
RFTN1-201ENST00000334133 CENPWQ5EE01 88 aa15.26■□□□□ 0.03
RFTN1-201ENST00000334133 TMEM167AQ8TBQ9 72 aa15.26■□□□□ 0.03
RFTN1-201ENST00000334133 MOSP00540 346 aa15.26■□□□□ 0.03
RFTN1-201ENST00000334133 PDPNQ86YL7 162 aa15.26■□□□□ 0.03
RFTN1-201ENST00000334133 MISP3Q96FF7 219 aa15.26■□□□□ 0.03
RFTN1-201ENST00000334133 EAF1Q96JC9 268 aaPredicted RBP15.26■□□□□ 0.03
RFTN1-201ENST00000334133 RAXQ9Y2V3 346 aa15.26■□□□□ 0.03
RFTN1-201ENST00000334133 CBLN1P23435 193 aa15.25■□□□□ 0.03
RFTN1-201ENST00000334133 ERVFC1-1P60608 527 aa15.25■□□□□ 0.03
RFTN1-201ENST00000334133 MUC15Q8N387 334 aa15.25■□□□□ 0.03
RFTN1-201ENST00000334133 VKORC1Q9BQB6 163 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms