RNA–Protein interactions for RNA: ENST00000332303.5

NSMCE3-201, Transcript of NSE3 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 BASIC

Gene NSMCE3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE3-201ENST00000332303 ID3Q02535 119 aa13.87□□□□□ -0.19
NSMCE3-201ENST00000332303 SAMD13Q5VXD3 122 aa13.87□□□□□ -0.19
NSMCE3-201ENST00000332303 FMC1Q96HJ9 113 aa13.87□□□□□ -0.19
NSMCE3-201ENST00000332303 A0A087WWC5 75 aa13.87□□□□□ -0.19
NSMCE3-201ENST00000332303 IGHV3-66A0A0C4DH42 116 aa13.87□□□□□ -0.19
NSMCE3-201ENST00000332303 CD69Q07108 199 aa13.87□□□□□ -0.19
NSMCE3-201ENST00000332303 OR4X2Q8NGF9 303 aa13.87□□□□□ -0.19
NSMCE3-201ENST00000332303 ARID2Q68CP9 1835 aa13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 C15orf61A6NNL5 157 aa13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 ATP5LO75964 103 aa13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 CLEC19AQ6UXS0 136 aa13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 PAQR4Q8N4S7 273 aaPredicted RBP13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 RPP21Q9H633 154 aaKnown RBP13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 F11RQ9Y624 299 aaKnown RBP13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 ARL6IP6Q8N6S5 226 aa13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 C18orf12Q96KH6 178 aa13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 CBLN4Q9NTU7 201 aa13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 CRYGSP22914 178 aa13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 TNFRSF18Q9Y5U5 241 aa13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 BRWD3Q6RI45 1802 aa13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 MED13LQ71F56 2210 aa13.86□□□□□ -0.19
NSMCE3-201ENST00000332303 NPFFO15130 113 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 MRPS16Q9Y3D3 137 aaKnown RBP13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 IGKV3OR2-268A0A0C4DH90 116 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 E9PLN8 166 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 MPZP25189 248 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 MST1P26927 711 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 VKORC1Q9BQB6 163 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 SMAD7O15105 426 aaKnown RBP13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 CDKN1AP38936 164 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 LY6G6FQ5SQ64 297 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 TMEM170BQ5T4T1 132 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 C17orf82Q86X59 251 aaPredicted RBP13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 HEATR1Q9H583 2144 aaKnown RBP13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 IGHV3OR16-8A0A075B7F1 116 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 A0A087WV48 116 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 PSMG4Q5JS54 123 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 MESP1Q9BRJ9 268 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 Q9H3A6 140 aa13.85□□□□□ -0.19
NSMCE3-201ENST00000332303 FAM209BQ5JX69 171 aa13.84□□□□□ -0.19
NSMCE3-201ENST00000332303 PVRIGQ6DKI7 326 aa13.84□□□□□ -0.19
NSMCE3-201ENST00000332303 TMEM160Q9NX00 188 aa13.84□□□□□ -0.19
NSMCE3-201ENST00000332303 DOCK4Q8N1I0 1966 aa13.84□□□□□ -0.19
NSMCE3-201ENST00000332303 PSMB11A5LHX3 300 aa13.84□□□□□ -0.19
NSMCE3-201ENST00000332303 CCL20P78556 96 aa13.84□□□□□ -0.19
NSMCE3-201ENST00000332303 TRAV8-6A0A0B4J262 113 aa13.84□□□□□ -0.19
NSMCE3-201ENST00000332303 APOHP02749 345 aaPredicted RBP13.84□□□□□ -0.19
NSMCE3-201ENST00000332303 ZCCHC24Q8N2G6 241 aaKnown RBP13.84□□□□□ -0.19
NSMCE3-201ENST00000332303 C18orf15Q96N68 181 aa13.84□□□□□ -0.19
NSMCE3-201ENST00000332303 CD59P13987 128 aa13.83□□□□□ -0.19
NSMCE3-201ENST00000332303 FER1L6-AS1Q8NA97 138 aa13.83□□□□□ -0.19
NSMCE3-201ENST00000332303 NPFFR1Q9GZQ6 430 aa13.83□□□□□ -0.19
NSMCE3-201ENST00000332303 PINLYPA6NC86 204 aa13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 EFNA2O43921 213 aa13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 DUTP33316 252 aaKnown RBP13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 IGHV1-18A0A0C4DH31 117 aa13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 H0YIZ8 118 aa13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 MYOD1P15172 320 aa13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 OTORQ9NRC9 128 aa13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 SPRR3Q9UBC9 169 aa13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 ORMDL3Q8N138 153 aa13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 ZNF418Q8TF45 676 aaPredicted RBP13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 DMRTA2Q96SC8 542 aa13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 IMMP2LQ96T52 175 aa13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 TBL2Q9Y4P3 447 aaKnown RBP13.83□□□□□ -0.2
NSMCE3-201ENST00000332303 IGHV3-11P01762 117 aa13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 SCGB1A1P11684 91 aa13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 RPL23P62829 140 aaKnown RBP13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 ITLN2Q8WWU7 325 aaPredicted RBP13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 SLC50A1Q9BRV3 221 aa13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 TUBA4BQ9H853 241 aa13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 A0A1W2PRE2 83 aa13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 TTC9CQ8N5M4 171 aa13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 FGFBP3Q8TAT2 258 aa13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 KIAA2026Q5HYC2 2103 aa13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 PATJQ8NI35 1801 aa13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 FABP5P3A8MUU1 101 aa13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 RNF125Q96EQ8 232 aa13.82□□□□□ -0.2
NSMCE3-201ENST00000332303 ZNF600Q6ZNG1 722 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 TNFRSF14Q92956 283 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 PARD6GQ9BYG4 376 aaPredicted RBP13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 WDR83OSQ9Y284 106 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 CHD5Q8TDI0 1954 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 GREB1Q4ZG55 1949 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 SBF2Q86WG5 1849 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 SRRM5B3KS81 715 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 GAS1P54826 345 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 PRCDQ00LT1 54 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 ASCL2Q99929 193 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 SHANK1Q9Y566 2161 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 TMEM262E9PQX1 116 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 NEUROG1Q92886 237 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 IGKV1-12A0A0C4DH73 117 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 HIGD1CA8MV81 97 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 IGKV1D-12P01611 117 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 TIMP3P35625 211 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 ZNF324BQ6AW86 544 aaPredicted RBP13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 SCGB3A1Q96QR1 104 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 ZNF236Q9UL36 1845 aa13.81□□□□□ -0.2
NSMCE3-201ENST00000332303 BDP1A6H8Y1 2624 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms