RNA–Protein interactions for RNA: ENST00000331239.8

C11orf54-201, Transcript of chromosome 11 open reading frame 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf54, Length 2,522 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-201ENST00000331239 ZNF727A8MUV8 499 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 M0QZK8 103 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 AP4M1O00189 453 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 RAMP3O60896 148 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 P0C879 139 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 RAB11AP62491 216 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 OR2B11Q5JQS5 317 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 UTF1Q5T230 341 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 FAM90A2PQ658T7 463 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 FAM53AQ6NSI3 398 aaPredicted RBP7.62□□□□□ -1.19
C11orf54-201ENST00000331239 RBMS3Q6XE24 437 aaKnown RBP7.62□□□□□ -1.19
C11orf54-201ENST00000331239 C1orf229Q6ZS94 237 aaPredicted RBP7.62□□□□□ -1.19
C11orf54-201ENST00000331239 TEX45Q8NA69 505 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 NPBQ8NG41 125 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 TAF15Q92804 592 aaKnown RBP eCLIP7.62□□□□□ -1.19
C11orf54-201ENST00000331239 OR4C12Q96R67 309 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 RBKSQ9H477 322 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 MAP1LC3B2A6NCE7 125 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 SMAD7O15105 426 aaKnown RBP7.62□□□□□ -1.19
C11orf54-201ENST00000331239 MOSP00540 346 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 AVPP01185 164 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 IL6RP08887 468 aaPredicted RBP7.62□□□□□ -1.19
C11orf54-201ENST00000331239 RPS10P46783 165 aaKnown RBP7.62□□□□□ -1.19
C11orf54-201ENST00000331239 ELLP55199 621 aaPredicted RBP7.62□□□□□ -1.19
C11orf54-201ENST00000331239 ERVK-16P61578 105 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 RPL30P62888 115 aaKnown RBP7.62□□□□□ -1.19
C11orf54-201ENST00000331239 OR8G2PQ6IF36 304 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 SSX7Q7RTT5 188 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 MAP1LC3BQ9GZQ8 125 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 FKBP11Q9NYL4 201 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 BET1LQ9NYM9 111 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 TIMM9Q9Y5J7 89 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 ABCA1O95477 2261 aa7.62□□□□□ -1.19
C11orf54-201ENST00000331239 VPS13CQ709C8 3753 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 CYSRT1A8MQ03 144 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 B4DEV8 164 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 S1PR2O95136 353 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 KRASP01116 189 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 IFNA1P01562 189 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 G6PCP35575 357 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 FGF8P55075 233 aaPredicted RBP7.61□□□□□ -1.19
C11orf54-201ENST00000331239 PNRC1Q12796 327 aaPredicted RBP7.61□□□□□ -1.19
C11orf54-201ENST00000331239 ELOBQ15370 118 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 VMA21Q3ZAQ7 101 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 FAM120AOSQ5T036 256 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 ZNF343Q6P1L6 599 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 MOB3BQ86TA1 216 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 Q8N6K4 173 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 Q8WTZ3 238 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 FCGR3BO75015 233 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 VENTXO95231 258 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 IGHV4-38-2P0DP08 117 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 BRWD1-AS2P59051 145 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 RPL15P61313 204 aaKnown RBP7.61□□□□□ -1.19
C11orf54-201ENST00000331239 KIAA0141Q14154 515 aaPredicted RBP7.61□□□□□ -1.19
C11orf54-201ENST00000331239 SLC16A13Q7RTY0 426 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 MAPK1IP1LQ8NDC0 245 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 P2RX4Q99571 388 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 YAE1D1Q9NRH1 226 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.61□□□□□ -1.19
C11orf54-201ENST00000331239 ZNRD1Q9P1U0 126 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 MED13LQ71F56 2210 aa7.61□□□□□ -1.19
C11orf54-201ENST00000331239 TIMM23O14925 209 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 NDUFA3O95167 84 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 IGHV3-7P01780 117 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 SSX2Q16385 188 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 PDLIM3Q53GG5 364 aaPredicted RBP7.6□□□□□ -1.19
C11orf54-201ENST00000331239 LDLRAD2Q5SZI1 272 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 LHFPL4Q7Z7J7 247 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 OR52E5Q8NH55 327 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 TMEM147Q9BVK8 224 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 VAX2Q9UIW0 290 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 URGCP-MRPS24S4R325 110 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 MYO9AB2RTY4 2548 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 CEBPZOSA8MTT3 80 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 CLDN34H7C241 214 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 CXCL1P09341 107 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 ATP6V1FQ16864 119 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 ZNF674Q2M3X9 581 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 Q6YL49 198 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 DTD1Q8TEA8 209 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 R3HDM4Q96D70 268 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 SRSF8Q9BRL6 282 aaKnown RBP7.6□□□□□ -1.19
C11orf54-201ENST00000331239 ZNF580Q9UK33 172 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 ZNF257Q9Y2Q1 563 aa7.6□□□□□ -1.19
C11orf54-201ENST00000331239 LY6G6DO95868 133 aa7.59□□□□□ -1.19
C11orf54-201ENST00000331239 SRP14P37108 136 aaKnown RBP7.59□□□□□ -1.19
C11orf54-201ENST00000331239 ATP5IP56385 69 aaPredicted RBP7.59□□□□□ -1.19
C11orf54-201ENST00000331239 CENPVQ7Z7K6 275 aaPredicted RBP7.59□□□□□ -1.19
C11orf54-201ENST00000331239 TMEM167AQ8TBQ9 72 aa7.59□□□□□ -1.19
C11orf54-201ENST00000331239 SSMEM1Q8WWF3 244 aa7.59□□□□□ -1.19
C11orf54-201ENST00000331239 CIB3Q96Q77 187 aaPredicted RBP7.59□□□□□ -1.19
C11orf54-201ENST00000331239 PRNDQ9UKY0 176 aa7.59□□□□□ -1.19
C11orf54-201ENST00000331239 HILPDAQ9Y5L2 63 aa7.59□□□□□ -1.19
C11orf54-201ENST00000331239 TGIF2-C20orf24A0A0A6YYL0 155 aa7.59□□□□□ -1.19
C11orf54-201ENST00000331239 A0A0U1RQK1 487 aa7.59□□□□□ -1.19
C11orf54-201ENST00000331239 MARCH11A6NNE9 402 aa7.59□□□□□ -1.19
C11orf54-201ENST00000331239 IGKV1D-33P01593 117 aa7.59□□□□□ -1.19
C11orf54-201ENST00000331239 IGKV1-33P01594 117 aa7.59□□□□□ -1.19
C11orf54-201ENST00000331239 CRYGBP07316 175 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms