RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 MED13Q9UHV7 2174 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 TRGV10A0A0A0MS01 117 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 C9JCJ5 164 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 ZNF138P52744 262 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 KIR3DS1Q14943 382 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 FAM53AQ6NSI3 398 aaPredicted RBP12.42□□□□□ -0.42
SCAP-202ENST00000320017 HINT2Q9BX68 163 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 MS4A5Q9H3V2 200 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 CADP27708 2225 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 IZUMO1RA6ND01 250 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 C9orf118A6NHY6 69 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 PMS2P5A8MQ11 134 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 J3QR06 171 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 CEACAM21Q3KPI0 293 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 ZNF718Q3SXZ3 478 aa12.42□□□□□ -0.42
SCAP-202ENST00000320017 ZNF48Q96MX3 618 aaPredicted RBP12.42□□□□□ -0.42
SCAP-202ENST00000320017 SYNGR3O43761 229 aa12.41□□□□□ -0.42
SCAP-202ENST00000320017 KLF7O75840 302 aaPredicted RBP12.41□□□□□ -0.42
SCAP-202ENST00000320017 CELA3AP09093 270 aa12.41□□□□□ -0.42
SCAP-202ENST00000320017 FAM27BQ5VT28 67 aa12.41□□□□□ -0.42
SCAP-202ENST00000320017 MRPL21Q7Z2W9 205 aaKnown RBP12.41□□□□□ -0.42
SCAP-202ENST00000320017 DMXL1Q9Y485 3027 aa12.41□□□□□ -0.42
SCAP-202ENST00000320017 IGLV3-12A0A075B6K2 115 aa12.41□□□□□ -0.42
SCAP-202ENST00000320017 CRYGSP22914 178 aa12.41□□□□□ -0.42
SCAP-202ENST00000320017 DSCR4P56555 118 aaPredicted RBP12.41□□□□□ -0.42
SCAP-202ENST00000320017 HES3Q5TGS1 186 aa12.41□□□□□ -0.42
SCAP-202ENST00000320017 MRPL14Q6P1L8 145 aaKnown RBP12.41□□□□□ -0.42
SCAP-202ENST00000320017 PET117Q6UWS5 81 aa12.41□□□□□ -0.42
SCAP-202ENST00000320017 C6orf15Q6UXA7 325 aaPredicted RBP12.41□□□□□ -0.42
SCAP-202ENST00000320017 OR52E5Q8NH55 327 aa12.41□□□□□ -0.42
SCAP-202ENST00000320017 FAM216AQ8WUB2 273 aa12.41□□□□□ -0.42
SCAP-202ENST00000320017 OSTCQ9NRP0 149 aa12.41□□□□□ -0.42
SCAP-202ENST00000320017 PLSCR4Q9NRQ2 329 aa12.41□□□□□ -0.42
SCAP-202ENST00000320017 TFF1P04155 84 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 SEC11AP67812 179 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 LTC4SQ16873 150 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 ATP1A1-AS1Q5TC04 95 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 CPT1CQ8TCG5 803 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 RAB1CQ92928 201 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 PROK2Q9HC23 129 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 C17orf98A8MV24 154 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 FABP2P12104 132 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 RPL30P62888 115 aaKnown RBP12.4□□□□□ -0.42
SCAP-202ENST00000320017 UFSP1Q6NVU6 142 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 GGTLC1Q9BX51 225 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 OR2H1Q9GZK4 316 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 SCRT2Q9NQ03 307 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 A0A1W2PRE2 83 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 HLA-DRB1P01911 266 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 CATR1Q13166 79 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 TRIP6Q15654 476 aaKnown RBP12.4□□□□□ -0.42
SCAP-202ENST00000320017 SRSF7Q16629 238 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCAP-202ENST00000320017 TREML4Q6UXN2 200 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 Q6ZS49 121 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 MIR17HGQ75NE6 70 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 FADS6Q8N9I5 356 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 TMEM54Q969K7 222 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 MGST2Q99735 147 aa12.4□□□□□ -0.42
SCAP-202ENST00000320017 LAMA5O15230 3695 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 IGHV1-45A0A0A0MS14 117 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 C15orf62A8K5M9 175 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 MRPL33O75394 65 aaKnown RBP12.39□□□□□ -0.43
SCAP-202ENST00000320017 IGLV2-14P01704 120 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 COX6A1P12074 109 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 TMEM42Q69YG0 159 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 SGK494Q96LW2 274 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 KCNIP1Q9NZI2 227 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 F11RQ9Y624 299 aaKnown RBP12.39□□□□□ -0.43
SCAP-202ENST00000320017 SLC25A53Q5H9E4 307 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 CXorf67Q86X51 503 aaPredicted RBP12.39□□□□□ -0.43
SCAP-202ENST00000320017 TPRX1Q8N7U7 411 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 BLNKQ8WV28 456 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 LINC00479Q96M42 142 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 PPIAL4EA0A075B759 164 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 GAGE12HA6NDE8 117 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 IGHV3-13P01766 116 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 IGHV3-7P01780 117 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 PPIAL4FP0DN26 164 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 EFNB3Q15768 340 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 ABHD12Q8N2K0 398 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 VSTM2AQ8TAG5 236 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 HSD17B10Q99714 261 aaKnown RBP12.39□□□□□ -0.43
SCAP-202ENST00000320017 DLL3Q9NYJ7 618 aa12.39□□□□□ -0.43
SCAP-202ENST00000320017 IGHV1-24A0A0C4DH33 117 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 PINLYPA6NC86 204 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 PRAMEF5Q5TYX0 476 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 GDF5OSQ5U4N7 250 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 PRAMEF6Q5VXH4 476 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 DUSP13Q9UII6 198 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 MGAQ8IWI9 3026 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 TRAV24A0A0B4J272 114 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 CDIPTO14735 213 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 C10orf128Q5T292 105 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 NEGR1Q7Z3B1 354 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 TEX45Q8NA69 505 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 OR2Z1Q8NG97 314 aa12.38□□□□□ -0.43
SCAP-202ENST00000320017 NTN3O00634 580 aaPredicted RBP12.37□□□□□ -0.43
SCAP-202ENST00000320017 OPRK1P41145 380 aa12.37□□□□□ -0.43
SCAP-202ENST00000320017 TUSC5Q8IXB3 177 aa12.37□□□□□ -0.43
SCAP-202ENST00000320017 TNRC6AQ8NDV7 1962 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms