RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 ITLN1Q8WWA0 313 aa15.56■□□□□ 0.08
RTN4-201ENST00000317610 PMCHP20382 165 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 PLA2G2CQ5R387 149 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 FAM201AQ5SY85 155 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 STUMQ69YW2 141 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 GCM1Q9NP62 436 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 SLC35D1Q9NTN3 355 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 MRPL27Q9P0M9 148 aaKnown RBP15.55■□□□□ 0.08
RTN4-201ENST00000317610 URB1O60287 2271 aaKnown RBP15.55■□□□□ 0.08
RTN4-201ENST00000317610 TNRC18O15417 2968 aaPredicted RBP15.55■□□□□ 0.08
RTN4-201ENST00000317610 APCSP02743 223 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 IGKV1-16P04430 117 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 MGST1P10620 155 aaKnown RBP15.55■□□□□ 0.08
RTN4-201ENST00000317610 DUX4L9Q6RFH8 374 aaPredicted RBP15.55■□□□□ 0.08
RTN4-201ENST00000317610 C19orf35Q6ZS72 473 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 SLC25A48Q6ZT89 311 aaKnown RBP15.55■□□□□ 0.08
RTN4-201ENST00000317610 TSKUQ8WUA8 353 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 MBD6Q96DN6 1003 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 SLC25A2Q9BXI2 301 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 UQCR10Q9UDW1 63 aa15.55■□□□□ 0.08
RTN4-201ENST00000317610 INTS1Q8N201 2190 aaKnown RBP15.54■□□□□ 0.08
RTN4-201ENST00000317610 C3orf79P0CE67 100 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 KLF3P57682 345 aaPredicted RBP15.54■□□□□ 0.08
RTN4-201ENST00000317610 CYB5R2Q6BCY4 276 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 IGFL2Q6UWQ7 119 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 FAM231DQ6ZW35 169 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 CACNG8Q8WXS5 425 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 ZNF714Q96N38 554 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 SPRY3O43610 288 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 IGLC2P0DOY2 106 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 IGLC3P0DOY3 106 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 GLRXP35754 106 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 GNG10P50151 68 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 MLANAQ16655 118 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 FDCSPQ8NFU4 85 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 GAFA1Q96PS6 74 aa15.54■□□□□ 0.08
RTN4-201ENST00000317610 IGLV3-9A0A075B6K5 115 aa15.53■□□□□ 0.08
RTN4-201ENST00000317610 BATFQ16520 125 aa15.53■□□□□ 0.08
RTN4-201ENST00000317610 SERTAD4Q9NUC0 356 aa15.53■□□□□ 0.08
RTN4-201ENST00000317610 RPUSD1Q9UJJ7 312 aaKnown RBP15.53■□□□□ 0.08
RTN4-201ENST00000317610 TNCP24821 2201 aa15.53■□□□□ 0.08
RTN4-201ENST00000317610 TM4SF5O14894 197 aa15.52■□□□□ 0.08
RTN4-201ENST00000317610 SAA1P0DJI8 122 aaPredicted RBP15.52■□□□□ 0.08
RTN4-201ENST00000317610 USF1P22415 310 aaPredicted RBP15.52■□□□□ 0.08
RTN4-201ENST00000317610 RNF7Q9UBF6 113 aa15.52■□□□□ 0.08
RTN4-201ENST00000317610 RAI1Q7Z5J4 1906 aaPredicted RBP15.52■□□□□ 0.08
RTN4-201ENST00000317610 DPRXA6NFQ7 191 aa15.52■□□□□ 0.07
RTN4-201ENST00000317610 INS-IGF2F8WCM5 200 aa15.52■□□□□ 0.07
RTN4-201ENST00000317610 HYPMO75409 117 aa15.52■□□□□ 0.07
RTN4-201ENST00000317610 UBE2L3P68036 154 aaKnown RBP15.52■□□□□ 0.07
RTN4-201ENST00000317610 SLAQ13239 276 aa15.52■□□□□ 0.07
RTN4-201ENST00000317610 MORN5Q5VZ52 161 aa15.52■□□□□ 0.07
RTN4-201ENST00000317610 C18orf32Q8TCD1 76 aa15.52■□□□□ 0.07
RTN4-201ENST00000317610 ZNF331Q9NQX6 463 aaPredicted RBP15.52■□□□□ 0.07
RTN4-201ENST00000317610 ZFP30Q9Y2G7 519 aa15.52■□□□□ 0.07
RTN4-201ENST00000317610 DLL1O00548 723 aa15.51■□□□□ 0.07
RTN4-201ENST00000317610 CCL11P51671 97 aa15.51■□□□□ 0.07
RTN4-201ENST00000317610 SELENOVP59797 346 aa15.51■□□□□ 0.07
RTN4-201ENST00000317610 FAM168AQ92567 244 aa15.51■□□□□ 0.07
RTN4-201ENST00000317610 DNAJC4Q9NNZ3 241 aa15.51■□□□□ 0.07
RTN4-201ENST00000317610 TRAV17A0A0B4J275 112 aa15.51■□□□□ 0.07
RTN4-201ENST00000317610 CA1P00915 261 aaPredicted RBP15.51■□□□□ 0.07
RTN4-201ENST00000317610 RELQ04864 619 aaPredicted RBP15.51■□□□□ 0.07
RTN4-201ENST00000317610 LOXL4Q96JB6 756 aa15.51■□□□□ 0.07
RTN4-201ENST00000317610 NDUFA4L2Q9NRX3 87 aa15.51■□□□□ 0.07
RTN4-201ENST00000317610 TRAV5A0A0B4J249 113 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 C3orf36Q3SXR2 165 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 ZNF833PQ6ZTB9 187 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 SEM1Q6ZVN7 128 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 OR10W1Q8NGF6 305 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 GRAMD2BQ96HH9 432 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 GUCD1Q96NT3 240 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 YLPM1P49750 1951 aaKnown RBP15.5■□□□□ 0.07
RTN4-201ENST00000317610 M0R1B8 84 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 NKX2-8O15522 239 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 SP9P0CG40 484 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 KLF5Q13887 457 aaPredicted RBP15.5■□□□□ 0.07
RTN4-201ENST00000317610 MMDQ15546 238 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 TIMM23BQ5SRD1 257 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 ZNF788Q6ZQV5 615 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 SPACA3Q8IXA5 215 aa15.5■□□□□ 0.07
RTN4-201ENST00000317610 OSR1Q8TAX0 266 aaPredicted RBP15.5■□□□□ 0.07
RTN4-201ENST00000317610 AMMECR1Q9Y4X0 333 aaPredicted RBP15.5■□□□□ 0.07
RTN4-201ENST00000317610 PCNX2A6NKB5 2137 aa15.49■□□□□ 0.07
RTN4-201ENST00000317610 MBD3L4A6NDZ8 208 aaPredicted RBP15.49■□□□□ 0.07
RTN4-201ENST00000317610 MBD3L3A6NE82 208 aaPredicted RBP15.49■□□□□ 0.07
RTN4-201ENST00000317610 MBD3L5A6NJ08 208 aaPredicted RBP15.49■□□□□ 0.07
RTN4-201ENST00000317610 FAM19A2Q8N3H0 131 aa15.49■□□□□ 0.07
RTN4-201ENST00000317610 KLHDC1Q8N7A1 406 aa15.49■□□□□ 0.07
RTN4-201ENST00000317610 NHLRC2Q8NBF2 726 aa15.49■□□□□ 0.07
RTN4-201ENST00000317610 MBD3L2Q8NHZ7 208 aaPredicted RBP15.49■□□□□ 0.07
RTN4-201ENST00000317610 BORCS7Q96B45 105 aa15.49■□□□□ 0.07
RTN4-201ENST00000317610 LINC00479Q96M42 142 aa15.49■□□□□ 0.07
RTN4-201ENST00000317610 RBM14Q96PK6 669 aaKnown RBP15.49■□□□□ 0.07
RTN4-201ENST00000317610 TFPI2P48307 235 aa15.49■□□□□ 0.07
RTN4-201ENST00000317610 ZNF329Q86UD4 541 aa15.49■□□□□ 0.07
RTN4-201ENST00000317610 SSBP3Q9BWW4 388 aaPredicted RBP15.49■□□□□ 0.07
RTN4-201ENST00000317610 GPR179Q6PRD1 2367 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 SFTPCP11686 197 aa15.48■□□□□ 0.07
RTN4-201ENST00000317610 CHRNB4P30926 498 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms