RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 DUX4L4P0CJ87 422 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 DUX4L5P0CJ88 424 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 DUX4L6P0CJ89 424 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 DUX4L7P0CJ90 424 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 PGA5P0DJD9 388 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 MPV17P39210 176 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 KCNJ3P48549 501 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 AP2S1P53680 142 aaPredicted RBP2.89□□□□□ -1.95
SMCO3-201ENST00000316048 SMCO1Q147U7 214 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 Q6P435 159 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 TGIF2LYQ8IUE0 185 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 PUSL1Q8N0Z8 303 aaKnown RBP2.89□□□□□ -1.95
SMCO3-201ENST00000316048 LGI3Q8N145 548 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 KCNRGQ8N5I3 272 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 MRPL30Q8TCC3 161 aaKnown RBP2.89□□□□□ -1.95
SMCO3-201ENST00000316048 ARPC1AQ92747 370 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 NRIP2Q9BQI9 281 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 NAA60Q9H7X0 242 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 SLC2A9Q9NRM0 540 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 RASL12Q9NYN1 266 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 GSKIPQ9P0R6 139 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 DUX4Q9UBX2 424 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 TRAPPC2LQ9UL33 140 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 TNFSF18Q9UNG2 199 aa2.89□□□□□ -1.95
SMCO3-201ENST00000316048 WDFY3Q8IZQ1 3526 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 MED12LQ86YW9 2145 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 DNAJC13O75165 2243 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 DMDP11532 3685 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 FREM1Q5H8C1 2179 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 TRAV14DV4A0A0A6YYC5 116 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 A0A0J9YXY3 114 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 C3orf85A0A1B0GTC6 90 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 SIRPB1O00241 398 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 GPR31O00270 319 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 RAB29O14966 203 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 ADAP1O75689 374 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 HAND1O96004 215 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 FABP1P07148 127 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 SCTP09683 121 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 ZNF250P15622 560 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 TDGF1P3P51864 188 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 KLF3P57682 345 aaPredicted RBP2.88□□□□□ -1.95
SMCO3-201ENST00000316048 UBA52P62987 128 aaKnown RBP2.88□□□□□ -1.95
SMCO3-201ENST00000316048 HLA-DRB3P79483 266 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 REG3AQ06141 175 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 IAH1Q2TAA2 248 aaPredicted RBP2.88□□□□□ -1.95
SMCO3-201ENST00000316048 SMIM21Q3B7S5 101 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 CLLU1Q5K131 121 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 ZNF880Q6PDB4 577 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 PRSS54Q6PEW0 395 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 WDR86Q86TI4 376 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 RPRMLQ8N4K4 120 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 C11orf42Q8N5U0 333 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 OR2Z1Q8NG97 314 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 OR1S2Q8NGQ3 325 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 GLYATL2Q8WU03 294 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 DCUN1D4Q92564 292 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 CYYR1Q96J86 154 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 TLNRD1Q9H1K6 362 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 HES4Q9HCC6 221 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 TAAR3PQ9P1P4 343 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 NAGKQ9UJ70 344 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 ZNF835Q9Y2P0 537 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 RBM7Q9Y580 266 aaKnown RBP2.88□□□□□ -1.95
SMCO3-201ENST00000316048 CACNA1HO95180 2353 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 MUC3AQ02505 3323 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 MYO7BQ6PIF6 2116 aa2.88□□□□□ -1.95
SMCO3-201ENST00000316048 TRBV6-7A0A0A0MS04 114 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 DUXBA0A1W2PPF3 345 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 TMEM30CPA0ZSE6 113 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 LINC00862A6NCI5 91 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 TAAR5O14804 337 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 OR5AC1P0C628 307 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 GNRHRP30968 328 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 CD200P41217 278 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 APOC4P55056 127 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 EIF5AP63241 154 aaKnown RBP2.87□□□□□ -1.95
SMCO3-201ENST00000316048 GNMTQ14749 295 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 SP6Q3SY56 376 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 C6orf183Q5T699 404 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 WDR82Q6UXN9 313 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 ACP7Q6ZNF0 438 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 Q6ZR03 302 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 ZNF826PQ6ZT77 177 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 ZNF695Q8IW36 515 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 C11orf53Q8IXP5 236 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 LRRC20Q8TCA0 184 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 MARC2Q969Z3 335 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 GALMQ96C23 342 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 PHYHIPLQ96FC7 376 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 OR10C1Q96KK4 312 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 ATP5SQ99766 215 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 RARRES2Q99969 163 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 C20orf24Q9BUV8 137 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 ZNF471Q9BX82 626 aaPredicted RBP2.87□□□□□ -1.95
SMCO3-201ENST00000316048 TMEM222Q9H0R3 208 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 OR51M1Q9H341 326 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 ZC4H2Q9NQZ6 224 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 ASF1BQ9NVP2 202 aa2.87□□□□□ -1.95
SMCO3-201ENST00000316048 WDFY4Q6ZS81 3184 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms