RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 CORTO00230 105 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 MPDU1O75352 247 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 PRH1P02810 166 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 MDKP21741 143 aaPredicted RBP17.81■□□□□ 0.44
IRF3-201ENST00000309877 IER3P46695 156 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 RAB5CP51148 216 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 MFAP2P55001 183 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 KRTAP1-1Q07627 177 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 MLANAQ16655 118 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 PVRIGQ6DKI7 326 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 SLC16A13Q7RTY0 426 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 OR1L6Q8NGR2 347 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 OR5R1Q8NH85 324 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 SLC35E1Q96K37 410 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 TIMM9Q9Y5J7 89 aa17.81■□□□□ 0.44
IRF3-201ENST00000309877 UMAD1C9J7I0 102 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 C17orf112F2Z3M2 114 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 EGR2P11161 476 aaPredicted RBP17.8■□□□□ 0.44
IRF3-201ENST00000309877 SRP14P37108 136 aaKnown RBP17.8■□□□□ 0.44
IRF3-201ENST00000309877 AKR1C8PQ5T2L2 129 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 ETFRF1Q6IPR1 90 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 IL17RELQ6ZVW7 336 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 LFNGQ8NES3 379 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 NPCDR1Q9BY65 106 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 NPIPB5A8MRT5 1133 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 AMY1AP04745 511 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 GAMTQ14353 236 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 C9orf152Q5JTZ5 239 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 ASPHD1Q5U4P2 390 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 TEPPQ6URK8 271 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 Q6YL49 198 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 SLC7A5P1Q8MH63 180 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 TTC9CQ8N5M4 171 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 SGMS2Q8NHU3 365 aa17.8■□□□□ 0.44
IRF3-201ENST00000309877 ATP6V0E1O15342 81 aa17.79■□□□□ 0.44
IRF3-201ENST00000309877 CRYGCP07315 174 aa17.79■□□□□ 0.44
IRF3-201ENST00000309877 SERF2P84101 59 aa17.79■□□□□ 0.44
IRF3-201ENST00000309877 RAB31Q13636 194 aa17.79■□□□□ 0.44
IRF3-201ENST00000309877 SAT2Q96F10 170 aaPredicted RBP17.79■□□□□ 0.44
IRF3-201ENST00000309877 FNDC4Q9H6D8 234 aaPredicted RBP17.79■□□□□ 0.44
IRF3-201ENST00000309877 ZANQ9Y493 2812 aa17.79■□□□□ 0.44
IRF3-201ENST00000309877 TRIM77I1YAP6 450 aa17.78■□□□□ 0.44
IRF3-201ENST00000309877 TSPAN9O75954 239 aa17.78■□□□□ 0.44
IRF3-201ENST00000309877 CAMLGP49069 296 aa17.78■□□□□ 0.44
IRF3-201ENST00000309877 BLOC1S1P78537 153 aa17.78■□□□□ 0.44
IRF3-201ENST00000309877 TMEM144Q7Z5S9 345 aa17.78■□□□□ 0.44
IRF3-201ENST00000309877 CENPVQ7Z7K6 275 aaPredicted RBP17.78■□□□□ 0.44
IRF3-201ENST00000309877 OR2T6Q8NHC8 308 aa17.78■□□□□ 0.44
IRF3-201ENST00000309877 ACY3Q96HD9 319 aa17.78■□□□□ 0.44
IRF3-201ENST00000309877 CXorf58Q96LI9 332 aa17.78■□□□□ 0.44
IRF3-201ENST00000309877 ZNF48Q96MX3 618 aaPredicted RBP17.78■□□□□ 0.44
IRF3-201ENST00000309877 CELSR1Q9NYQ6 3014 aa17.78■□□□□ 0.44
IRF3-201ENST00000309877 CYB5BO43169 146 aa17.77■□□□□ 0.44
IRF3-201ENST00000309877 UNQ5815/PRO19632Q6UWF5 114 aa17.77■□□□□ 0.44
IRF3-201ENST00000309877 TMUB1Q9BVT8 246 aa17.77■□□□□ 0.44
IRF3-201ENST00000309877 TNFRSF19Q9NS68 423 aa17.77■□□□□ 0.44
IRF3-201ENST00000309877 LSM4Q9Y4Z0 139 aaKnown RBP17.77■□□□□ 0.44
IRF3-201ENST00000309877 CSPG4Q6UVK1 2322 aa17.77■□□□□ 0.44
IRF3-201ENST00000309877 LINC00862A6NCI5 91 aa17.77■□□□□ 0.43
IRF3-201ENST00000309877 ECSCRQ19T08 205 aa17.77■□□□□ 0.43
IRF3-201ENST00000309877 OR5T1Q8NG75 326 aa17.77■□□□□ 0.43
IRF3-201ENST00000309877 TMEM68Q96MH6 324 aa17.77■□□□□ 0.43
IRF3-201ENST00000309877 MGST2Q99735 147 aa17.77■□□□□ 0.43
IRF3-201ENST00000309877 PRDM13Q9H4Q3 707 aa17.77■□□□□ 0.43
IRF3-201ENST00000309877 DMRT1Q9Y5R6 373 aa17.77■□□□□ 0.43
IRF3-201ENST00000309877 IGHV3-48P01763 117 aa17.76■□□□□ 0.43
IRF3-201ENST00000309877 HNF1AP20823 631 aa17.76■□□□□ 0.43
IRF3-201ENST00000309877 ELLP55199 621 aaPredicted RBP17.76■□□□□ 0.43
IRF3-201ENST00000309877 Q6ZRG5 221 aa17.76■□□□□ 0.43
IRF3-201ENST00000309877 FAM213BQ8TBF2 198 aa17.76■□□□□ 0.43
IRF3-201ENST00000309877 LINC01548A6NM66 108 aa17.75■□□□□ 0.43
IRF3-201ENST00000309877 AGPAT2O15120 278 aa17.75■□□□□ 0.43
IRF3-201ENST00000309877 MT-CO2P00403 227 aa17.75■□□□□ 0.43
IRF3-201ENST00000309877 FFAR4Q5NUL3 377 aa17.75■□□□□ 0.43
IRF3-201ENST00000309877 PFDN2Q9UHV9 154 aa17.75■□□□□ 0.43
IRF3-201ENST00000309877 IGHV3-21A0A0B4J1V1 117 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 FHITP49789 147 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 ZNF616Q08AN1 781 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 PXDC1Q5TGL8 231 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 FAM110DQ8TAY7 271 aaPredicted RBP17.74■□□□□ 0.43
IRF3-201ENST00000309877 NPIPB3Q92617 1050 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 GGTLC1Q9BX51 225 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 KCNIP2Q9NS61 270 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 VPREB3Q9UKI3 123 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 NAV3Q8IVL0 2385 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 TEX15Q9BXT5 2789 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 HOXA3O43365 443 aaPredicted RBP17.74■□□□□ 0.43
IRF3-201ENST00000309877 MBP02144 154 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 RND2P52198 227 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 AKIRIN2Q53H80 203 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 DPPA3Q6W0C5 159 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 SLC35E3Q7Z769 313 aa17.74■□□□□ 0.43
IRF3-201ENST00000309877 SOX15O60248 233 aa17.73■□□□□ 0.43
IRF3-201ENST00000309877 FLNAP21333 2647 aaKnown RBP17.73■□□□□ 0.43
IRF3-201ENST00000309877 BLCAPP62952 87 aa17.73■□□□□ 0.43
IRF3-201ENST00000309877 TMEM41BQ5BJD5 291 aa17.73■□□□□ 0.43
IRF3-201ENST00000309877 SIGLECL1Q8N7X8 197 aa17.73■□□□□ 0.43
IRF3-201ENST00000309877 VSIRQ9H7M9 311 aa17.73■□□□□ 0.43
IRF3-201ENST00000309877 IGLV11-55A0A075B6I3 123 aa17.72■□□□□ 0.43
IRF3-201ENST00000309877 I3L2K1 104 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms