RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 IQCF6A8MYZ5 107 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 IFNL4K9M1U5 179 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 SLC33A1O00400 549 aaPredicted RBP3.98□□□□□ -1.77
CKS1B-201ENST00000308987 TNFSF12O43508 249 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 OR2H2O95918 312 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 IAPPP10997 89 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 FABP4P15090 132 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 SLC25A16P16260 332 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 EGR1P18146 543 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 USF1P22415 310 aaPredicted RBP3.98□□□□□ -1.77
CKS1B-201ENST00000308987 WNT5AP41221 380 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF83P51522 516 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 RPP30P78346 268 aaKnown RBP3.98□□□□□ -1.77
CKS1B-201ENST00000308987 EIF4EBP1Q13541 118 aaPredicted RBP3.98□□□□□ -1.77
CKS1B-201ENST00000308987 GAMTQ14353 236 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 C9orf152Q5JTZ5 239 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 SPANXN5Q5MJ07 72 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 TIMM23BQ5SRD1 257 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 SUMO4Q6EEV6 95 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 SLC35E4Q6ICL7 350 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 CLEC2AQ6UVW9 174 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 SSX9Q7RTT3 188 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 C16orf82Q7Z2V1 217 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 C1orf174Q8IYL3 243 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 MUC15Q8N387 334 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 DRAM1Q8N682 238 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.98□□□□□ -1.77
CKS1B-201ENST00000308987 ZNF709Q8N972 641 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 OR10P1Q8NGE3 313 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 OR10G9Q8NGN4 311 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 OR10G7Q8NGN6 311 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 OR1K1Q8NGR3 316 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 OR2T10Q8NGZ9 312 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 OR52E5Q8NH55 327 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 RDH5Q92781 318 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 TMEM18Q96B42 140 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 C14orf144Q96I85 54 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 RBKSQ9H477 322 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 VSIRQ9H7M9 311 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 HES4Q9HCC6 221 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 NGBQ9NPG2 151 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 KCNIP2Q9NS61 270 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 OR6C3Q9NZP0 311 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 IL36RNQ9UBH0 155 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 TRAPPC2LQ9UL33 140 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 RBM7Q9Y580 266 aaKnown RBP3.98□□□□□ -1.77
CKS1B-201ENST00000308987 LY96Q9Y6Y9 160 aa3.98□□□□□ -1.77
CKS1B-201ENST00000308987 A0A087X0M5 115 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 A0A1B0GX30 115 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 A8MWP6 167 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 H3BP45 60 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 SLC31A2O15432 143 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 MLNRO43193 412 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 RBFOX2O43251 390 aaKnown RBP eCLIP3.97□□□□□ -1.77
CKS1B-201ENST00000308987 NGFP01138 241 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 GYPAP02724 150 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 AMBPP02760 352 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 GZMBP10144 247 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 CCNOP22674 350 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 GALR1P47211 349 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 FABP6P51161 128 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 EFNA4P52798 201 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 DSCR9P59020 149 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 TAS2R60P59551 318 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 HTD2P86397 168 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 ADIRFQ15847 76 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 TBC1D28Q2M2D7 210 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 PDLIM3Q53GG5 364 aaPredicted RBP3.97□□□□□ -1.77
CKS1B-201ENST00000308987 ACTL10Q5JWF8 245 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 FFAR4Q5NUL3 377 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 GFI1BQ5VTD9 330 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 FBXW9Q5XUX1 488 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 RUSC1-AS1Q66K80 236 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 SSX7Q7RTT5 188 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 ZCCHC24Q8N2G6 241 aaKnown RBP3.97□□□□□ -1.77
CKS1B-201ENST00000308987 SCCPDHQ8NBX0 429 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 DTD1Q8TEA8 209 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 IL1F10Q8WWZ1 152 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 RPL36ALQ969Q0 106 aaKnown RBP3.97□□□□□ -1.77
CKS1B-201ENST00000308987 GALMQ96C23 342 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 HSD17B10Q99714 261 aaKnown RBP3.97□□□□□ -1.77
CKS1B-201ENST00000308987 NDUFAF3Q9BU61 184 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 PARLQ9H300 379 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 NCOR1P1Q9H4R4 102 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 OR1A1Q9P1Q5 309 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 KCNS2Q9ULS6 477 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 PPP1R3CQ9UQK1 317 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 WDR83OSQ9Y284 106 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 ARL2-SNX15V9GYD0 113 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 COL7A1Q02388 2944 aa3.97□□□□□ -1.77
CKS1B-201ENST00000308987 TANC2Q9HCD6 1990 aa3.96□□□□□ -1.77
CKS1B-201ENST00000308987 UBE2L5PA0A1B0GUS4 154 aa3.96□□□□□ -1.78
CKS1B-201ENST00000308987 A0A1B0GWJ7 208 aa3.96□□□□□ -1.78
CKS1B-201ENST00000308987 ODAMA1E959 279 aa3.96□□□□□ -1.78
CKS1B-201ENST00000308987 XKRY2A2RUG3 117 aa3.96□□□□□ -1.78
CKS1B-201ENST00000308987 FNDC10F2Z333 226 aa3.96□□□□□ -1.78
CKS1B-201ENST00000308987 M0R1B8 84 aa3.96□□□□□ -1.78
CKS1B-201ENST00000308987 HSPB6O14558 160 aa3.96□□□□□ -1.78
CKS1B-201ENST00000308987 ITGB1BP1O14713 200 aa3.96□□□□□ -1.78
CKS1B-201ENST00000308987 RHBDL1O75783 438 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms