RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 A0A1W2PNR3 127 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 FCGR2BP31994 310 aaPredicted RBP3.39□□□□□ -1.87
USH2A-201ENST00000307340 NMSQ5H8A3 153 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 ASPHD2Q6ICH7 369 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 C17orf82Q86X59 251 aaPredicted RBP3.39□□□□□ -1.87
USH2A-201ENST00000307340 RCC1LQ96I51 464 aaKnown RBP3.39□□□□□ -1.87
USH2A-201ENST00000307340 PPIHO43447 177 aaKnown RBP3.39□□□□□ -1.87
USH2A-201ENST00000307340 RUNX1Q01196 453 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 FUT5Q11128 374 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 DEFB123Q8N688 67 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 RGP1Q92546 391 aaPredicted RBP3.39□□□□□ -1.87
USH2A-201ENST00000307340 C18orf12Q96KH6 178 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 HDHD3Q9BSH5 251 aaPredicted RBP3.39□□□□□ -1.87
USH2A-201ENST00000307340 J3QLI3 93 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 M0R2P5 195 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 TLNRD1Q9H1K6 362 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 A1L4Q6 167 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 KLK10O43240 276 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 MNX1P50219 401 aaPredicted RBP3.39□□□□□ -1.87
USH2A-201ENST00000307340 CXorf66Q5JRM2 361 aaPredicted RBP3.39□□□□□ -1.87
USH2A-201ENST00000307340 CFAP161Q6P656 301 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 VHLLQ6RSH7 139 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 LYZL2Q7Z4W2 148 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 LYPD6BQ8NI32 183 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 ZNF474Q6S9Z5 364 aaPredicted RBP3.39□□□□□ -1.87
USH2A-201ENST00000307340 C20orf24Q9BUV8 137 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 LINC00696Q6ZRV3 163 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 MAFAQ8NHW3 353 aaPredicted RBP3.39□□□□□ -1.87
USH2A-201ENST00000307340 TMEM141Q96I45 108 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 CLUHP3Q96NS8 147 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 PTPRSQ13332 1948 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 C2CD4DB7Z1M9 353 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 NDUFB4O95168 129 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 PRSS53Q2L4Q9 553 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 DDB2Q92466 427 aa3.39□□□□□ -1.87
USH2A-201ENST00000307340 MRPL53Q96EL3 112 aaKnown RBP3.39□□□□□ -1.87
USH2A-201ENST00000307340 RPP21Q9H633 154 aaKnown RBP3.39□□□□□ -1.87
USH2A-201ENST00000307340 SRRM5B3KS81 715 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 SPRY1O43609 319 aaPredicted RBP3.38□□□□□ -1.87
USH2A-201ENST00000307340 LYZL6O75951 148 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 THY1P04216 161 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 GNB1P62873 340 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 C19orf54Q5BKX5 351 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 KAAG1Q9UBP8 84 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 FAM157BP0CG42 384 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 PSG2P11465 335 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 NABP2Q9BQ15 211 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 TTC9CQ8N5M4 171 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 TCF19Q9Y242 345 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 TRAV9-2A0A087WT02 112 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 CSRP2Q16527 193 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 C12orf76Q8N812 135 aaPredicted RBP3.38□□□□□ -1.87
USH2A-201ENST00000307340 CT55Q8WUE5 264 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 ZNF385AQ96PM9 386 aaKnown RBP3.38□□□□□ -1.87
USH2A-201ENST00000307340 TBX15Q96SF7 602 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 COX6A1P12074 109 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 KLRB1Q12918 225 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 CCL17Q92583 94 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 A0A1B0GTL3 188 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 LEPP41159 167 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 VDAC2P45880 294 aaPredicted RBP3.38□□□□□ -1.87
USH2A-201ENST00000307340 C10orf91Q5T1B1 145 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 SPSB2Q99619 263 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 IL36RNQ9UBH0 155 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 LOC102724200A0A096LPH7 203 aaPredicted RBP3.38□□□□□ -1.87
USH2A-201ENST00000307340 LDLRAD4O15165 306 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 NTN1O95631 604 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 BMPERQ8N8U9 685 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 GRIFINA4D1Z8 144 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 OR2K2Q8NGT1 345 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 GDF15Q99988 308 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 SSBP3Q9BWW4 388 aaPredicted RBP3.38□□□□□ -1.87
USH2A-201ENST00000307340 MBNL3Q9NUK0 354 aaKnown RBP3.38□□□□□ -1.87
USH2A-201ENST00000307340 OVOL1O14753 267 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 IGKV3-15P01624 115 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 C3AR1Q16581 482 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 C9orf139Q6ZV77 190 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 IGFBP2P18065 325 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 PDE6GP18545 87 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 RTP5Q14D33 572 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 CENPVQ7Z7K6 275 aaPredicted RBP3.38□□□□□ -1.87
USH2A-201ENST00000307340 GTSF1LQ9H1H1 148 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 PEX7O00628 323 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 FGF8P55075 233 aaPredicted RBP3.38□□□□□ -1.87
USH2A-201ENST00000307340 LILRA1O75019 489 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 RND2P52198 227 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 ZNF562Q6V9R5 426 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 IFI27L1Q96BM0 104 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 RIF1Q5UIP0 2472 aaKnown RBP3.38□□□□□ -1.87
USH2A-201ENST00000307340 J3KRW8 73 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 CTSBP07858 339 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 ANAPC10Q9UM13 185 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 GFRA1P56159 465 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 OR11H6Q8NGC7 330 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 ISOC2Q96AB3 205 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 H0Y8X5 98 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 EIF4EBP3O60516 100 aaPredicted RBP3.38□□□□□ -1.87
USH2A-201ENST00000307340 PDLIM4P50479 330 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 MAJINQ3KP22 176 aa3.38□□□□□ -1.87
USH2A-201ENST00000307340 SHISA7A6NL88 538 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms