RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 DNASE2O00115 360 aaPredicted RBP11.34□□□□□ -0.59
CDH16-201ENST00000299752 CYB5BO43169 146 aa11.34□□□□□ -0.59
CDH16-201ENST00000299752 YIF1AO95070 293 aa11.34□□□□□ -0.59
CDH16-201ENST00000299752 VENTXO95231 258 aa11.34□□□□□ -0.59
CDH16-201ENST00000299752 LGALS4P56470 323 aa11.34□□□□□ -0.59
CDH16-201ENST00000299752 SOX21Q9Y651 276 aaPredicted RBP11.34□□□□□ -0.59
CDH16-201ENST00000299752 LOC102723971A0A1B0GUV8 181 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 VWC2LB2RUY7 222 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 FOXH1O75593 365 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 SRP19P09132 144 aaKnown RBP11.33□□□□□ -0.6
CDH16-201ENST00000299752 ATP5IP56385 69 aaPredicted RBP11.33□□□□□ -0.6
CDH16-201ENST00000299752 GAMTQ14353 236 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 SOHLH1Q5JUK2 328 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 BRD3OSQ6XYD6 125 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 IQCF2Q8IXL9 164 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 CLRN3Q8NCR9 226 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 TEX15Q9BXT5 2789 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 INS-IGF2F8WCM5 200 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 TSPAN4O14817 238 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 BCL2P10415 239 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 CDC34P49427 236 aaPredicted RBP11.33□□□□□ -0.6
CDH16-201ENST00000299752 PLGLAQ15195 96 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 KHDC3LQ587J8 217 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 C19orf35Q6ZS72 473 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 CFHR4Q92496 578 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 P2RX4Q99571 388 aa11.33□□□□□ -0.6
CDH16-201ENST00000299752 UNKLQ9H9P5 680 aaKnown RBP11.33□□□□□ -0.6
CDH16-201ENST00000299752 FCN1O00602 326 aa11.32□□□□□ -0.6
CDH16-201ENST00000299752 HSPB1P04792 205 aaKnown RBP11.32□□□□□ -0.6
CDH16-201ENST00000299752 RPL27AP46776 148 aaKnown RBP11.32□□□□□ -0.6
CDH16-201ENST00000299752 B2MP61769 119 aa11.32□□□□□ -0.6
CDH16-201ENST00000299752 MMDQ15546 238 aa11.32□□□□□ -0.6
CDH16-201ENST00000299752 CYB561D1Q8N8Q1 229 aa11.32□□□□□ -0.6
CDH16-201ENST00000299752 C20orf24Q9BUV8 137 aa11.32□□□□□ -0.6
CDH16-201ENST00000299752 IGKV1OR2-108A0A075B7D4 117 aa11.32□□□□□ -0.6
CDH16-201ENST00000299752 IGHV3-48P01763 117 aa11.32□□□□□ -0.6
CDH16-201ENST00000299752 CD69Q07108 199 aa11.32□□□□□ -0.6
CDH16-201ENST00000299752 RAB31Q13636 194 aa11.32□□□□□ -0.6
CDH16-201ENST00000299752 STPG3Q8N7X2 389 aa11.32□□□□□ -0.6
CDH16-201ENST00000299752 OR2T6Q8NHC8 308 aa11.32□□□□□ -0.6
CDH16-201ENST00000299752 A0A1W2PPV4 95 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 IGLC7A0M8Q6 106 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 AREGP15514 252 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 COMPP49747 757 aaPredicted RBP11.31□□□□□ -0.6
CDH16-201ENST00000299752 TMEM144Q7Z5S9 345 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 CBLN2Q8IUK8 224 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 RNF223E7ERA6 249 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 FNDC10F2Z333 226 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 AKR1C3P42330 323 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 SUB1P53999 127 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDH16-201ENST00000299752 ACY3Q96HD9 319 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 RNF5Q99942 180 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 CREBBPQ92793 2442 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 SAA4P35542 130 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 SLC16A13Q7RTY0 426 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 GATAD1Q8WUU5 269 aa11.31□□□□□ -0.6
CDH16-201ENST00000299752 PUS1Q9Y606 427 aaKnown RBP eCLIP11.31□□□□□ -0.6
CDH16-201ENST00000299752 TRAV40A0A0B4J280 105 aa11.3□□□□□ -0.6
CDH16-201ENST00000299752 M0R036 132 aa11.3□□□□□ -0.6
CDH16-201ENST00000299752 GATA2P23769 480 aaPredicted RBP11.3□□□□□ -0.6
CDH16-201ENST00000299752 FAM120AOSQ5T036 256 aa11.3□□□□□ -0.6
CDH16-201ENST00000299752 PIP4P2Q8N4L2 257 aa11.3□□□□□ -0.6
CDH16-201ENST00000299752 FNDC4Q9H6D8 234 aaPredicted RBP11.3□□□□□ -0.6
CDH16-201ENST00000299752 SEC14L6B5MCN3 397 aa11.3□□□□□ -0.6
CDH16-201ENST00000299752 NDUFS8O00217 210 aa11.3□□□□□ -0.6
CDH16-201ENST00000299752 SOX15O60248 233 aa11.3□□□□□ -0.6
CDH16-201ENST00000299752 MOSP00540 346 aa11.3□□□□□ -0.6
CDH16-201ENST00000299752 SNRNP70P08621 437 aaKnown RBP11.3□□□□□ -0.6
CDH16-201ENST00000299752 RPL29P47914 159 aaKnown RBP11.3□□□□□ -0.6
CDH16-201ENST00000299752 SSBP2P81877 361 aaPredicted RBP11.3□□□□□ -0.6
CDH16-201ENST00000299752 HABP2Q14520 560 aaPredicted RBP11.3□□□□□ -0.6
CDH16-201ENST00000299752 EAF1Q96JC9 268 aaPredicted RBP11.3□□□□□ -0.6
CDH16-201ENST00000299752 PSMG3-AS1Q96PY0 264 aa11.3□□□□□ -0.6
CDH16-201ENST00000299752 KCNIP2Q9NS61 270 aa11.3□□□□□ -0.6
CDH16-201ENST00000299752 VAX2Q9UIW0 290 aa11.3□□□□□ -0.6
CDH16-201ENST00000299752 IFNA1P01562 189 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 OR10J1P30954 320 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 MAS1LP35410 378 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 NOTCH2Q04721 2471 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 AWAT1Q58HT5 328 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 RBMS3Q6XE24 437 aaKnown RBP11.29□□□□□ -0.6
CDH16-201ENST00000299752 CACNG8Q8WXS5 425 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 UNC79Q9P2D8 2635 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 CENPVL3A0A0U1RRI6 287 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 NBR2O15453 112 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 GPX4P36969 197 aaPredicted RBP11.29□□□□□ -0.6
CDH16-201ENST00000299752 SLC35E3Q7Z769 313 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 RNASEH2CQ8TDP1 164 aaKnown RBP11.29□□□□□ -0.6
CDH16-201ENST00000299752 ABHD5Q8WTS1 349 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 SRSF12Q8WXF0 261 aaKnown RBP11.29□□□□□ -0.6
CDH16-201ENST00000299752 SLC35E1Q96K37 410 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 SEPSECSQ9HD40 501 aaKnown RBP11.29□□□□□ -0.6
CDH16-201ENST00000299752 HIF1ANQ9NWT6 349 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 SLC45A2Q9UMX9 530 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 ITPR3Q14573 2671 aa11.29□□□□□ -0.6
CDH16-201ENST00000299752 CNIH1O95406 144 aa11.28□□□□□ -0.6
CDH16-201ENST00000299752 LINC00869P0C866 280 aa11.28□□□□□ -0.6
CDH16-201ENST00000299752 IGHV4-38-2P0DP08 117 aa11.28□□□□□ -0.6
CDH16-201ENST00000299752 PRR20EP86478 221 aa11.28□□□□□ -0.6
CDH16-201ENST00000299752 PRR20CP86479 221 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms