RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 TBL2Q9Y4P3 447 aaKnown RBP12.09□□□□□ -0.47
CCT3-201ENST00000295688 YLPM1P49750 1951 aaKnown RBP12.09□□□□□ -0.47
CCT3-201ENST00000295688 IGKV1OR2-108A0A075B7D4 117 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 hADV38S2A0JD32 116 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 F2Z2F3 143 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 INS-IGF2F8WCM5 200 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 DLL1O00548 723 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 IGLV2-8P01709 118 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 APOA2P02652 100 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 MGST1P10620 155 aaKnown RBP12.09□□□□□ -0.47
CCT3-201ENST00000295688 KRTDAPP60985 99 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 COL5A1-AS1Q5SY13 56 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 C19orf35Q6ZS72 473 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 OR1L4Q8NGR5 311 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 ZNF714Q96N38 554 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 GAFA1Q96PS6 74 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 DNAJC4Q9NNZ3 241 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 SERTAD4Q9NUC0 356 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 CDC42EP3Q9UKI2 254 aa12.09□□□□□ -0.47
CCT3-201ENST00000295688 INTS1Q8N201 2190 aaKnown RBP12.08□□□□□ -0.48
CCT3-201ENST00000295688 APCSP02743 223 aa12.08□□□□□ -0.48
CCT3-201ENST00000295688 FRMD6-AS1P0C7T7 363 aa12.08□□□□□ -0.48
CCT3-201ENST00000295688 TNFAIP6P98066 277 aaPredicted RBP12.08□□□□□ -0.48
CCT3-201ENST00000295688 FXYD3Q14802 87 aa12.08□□□□□ -0.48
CCT3-201ENST00000295688 ZNF788Q6ZQV5 615 aa12.08□□□□□ -0.48
CCT3-201ENST00000295688 WIPF2Q8TF74 440 aaPredicted RBP12.08□□□□□ -0.48
CCT3-201ENST00000295688 FAM103A1Q9BTL3 118 aaKnown RBP12.08□□□□□ -0.48
CCT3-201ENST00000295688 COLQQ9Y215 455 aaPredicted RBP12.08□□□□□ -0.48
CCT3-201ENST00000295688 ZFP30Q9Y2G7 519 aa12.08□□□□□ -0.48
CCT3-201ENST00000295688 PRR14LQ5THK1 2151 aa12.08□□□□□ -0.48
CCT3-201ENST00000295688 DSCAMO60469 2012 aa12.08□□□□□ -0.48
CCT3-201ENST00000295688 A0A1W2PN81 502 aa12.08□□□□□ -0.48
CCT3-201ENST00000295688 A0A1W2PS18 150 aa12.08□□□□□ -0.48
CCT3-201ENST00000295688 FAM231DQ6ZW35 169 aa12.08□□□□□ -0.48
CCT3-201ENST00000295688 MRPL27Q9P0M9 148 aaKnown RBP12.08□□□□□ -0.48
CCT3-201ENST00000295688 RNF114Q9Y508 228 aa12.08□□□□□ -0.48
CCT3-201ENST00000295688 URB1O60287 2271 aaKnown RBP12.07□□□□□ -0.48
CCT3-201ENST00000295688 SPINK4O60575 86 aa12.07□□□□□ -0.48
CCT3-201ENST00000295688 ZNF324O75467 553 aaPredicted RBP12.07□□□□□ -0.48
CCT3-201ENST00000295688 SAA1P0DJI8 122 aaPredicted RBP12.07□□□□□ -0.48
CCT3-201ENST00000295688 GATA2P23769 480 aaPredicted RBP12.07□□□□□ -0.48
CCT3-201ENST00000295688 SRIP30626 198 aa12.07□□□□□ -0.48
CCT3-201ENST00000295688 UBE2L3P68036 154 aaKnown RBP12.07□□□□□ -0.48
CCT3-201ENST00000295688 FAM201AQ5SY85 155 aa12.07□□□□□ -0.48
CCT3-201ENST00000295688 CYB5R2Q6BCY4 276 aa12.07□□□□□ -0.48
CCT3-201ENST00000295688 VHLLQ6RSH7 139 aa12.07□□□□□ -0.48
CCT3-201ENST00000295688 OR9G1Q8NH87 305 aa12.07□□□□□ -0.48
CCT3-201ENST00000295688 FAM122AQ96E09 287 aa12.07□□□□□ -0.48
CCT3-201ENST00000295688 SRRM4A7MD48 611 aaKnown RBP12.06□□□□□ -0.48
CCT3-201ENST00000295688 BMPR1BO00238 502 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 USF1P22415 310 aaPredicted RBP12.06□□□□□ -0.48
CCT3-201ENST00000295688 PRRX1P54821 245 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 ALKBH2Q6NS38 261 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 ZNF833PQ6ZTB9 187 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 MOB3BQ86TA1 216 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 OR4A5Q8NH83 315 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 CCL13Q99616 98 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 GAL3ST2Q9H3Q3 398 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 NDUFA4L2Q9NRX3 87 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 LINC00312Q9Y6C7 94 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 FRYLO94915 3013 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 FREM2Q5SZK8 3169 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 IGKV1-16P04430 117 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 SUB1P53999 127 aaKnown RBP eCLIP12.06□□□□□ -0.488e-7■■■■□ 25.2
CCT3-201ENST00000295688 TCL1AP56279 114 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 BPIFB3P59826 476 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 KIAA1644Q3SXP7 199 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 MRPL54Q6P161 138 aaKnown RBP12.06□□□□□ -0.48
CCT3-201ENST00000295688 BORCS7Q96B45 105 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 FAM167A-AS1Q96KT0 104 aa12.06□□□□□ -0.48
CCT3-201ENST00000295688 PSMB11A5LHX3 300 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 M0R296 226 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 PMCHP20382 165 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 RPL8P62917 257 aaKnown RBP12.05□□□□□ -0.48
CCT3-201ENST00000295688 MEF2CQ06413 473 aaPredicted RBP12.05□□□□□ -0.48
CCT3-201ENST00000295688 TEX36Q5VZQ5 186 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 KLHDC1Q8N7A1 406 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 DEFB108BQ8NET1 73 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 VSTM2AQ8TAG5 236 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 GRAMD2BQ96HH9 432 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 SLC25A2Q9BXI2 301 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 UQCR10Q9UDW1 63 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 AMMECR1Q9Y4X0 333 aaPredicted RBP12.05□□□□□ -0.48
CCT3-201ENST00000295688 NKX6-3A6NJ46 265 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 COX7A2P2O60397 106 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 IGHV1-46P01743 117 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 SPATA45Q537H7 98 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 TMEM177Q53S58 311 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 SEM1Q6ZVN7 128 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 HARBI1Q96MB7 349 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 PAXXQ9BUH6 204 aa12.05□□□□□ -0.48
CCT3-201ENST00000295688 IGLC2P0DOY2 106 aa12.04□□□□□ -0.48
CCT3-201ENST00000295688 IGLC3P0DOY3 106 aa12.04□□□□□ -0.48
CCT3-201ENST00000295688 SLC35B1P78383 322 aa12.04□□□□□ -0.48
CCT3-201ENST00000295688 C10orf113Q5VZT2 155 aa12.04□□□□□ -0.48
CCT3-201ENST00000295688 DUX4L9Q6RFH8 374 aaPredicted RBP12.04□□□□□ -0.48
CCT3-201ENST00000295688 ZNF474Q6S9Z5 364 aaPredicted RBP12.04□□□□□ -0.48
CCT3-201ENST00000295688 ZNF430Q9H8G1 570 aaPredicted RBP12.04□□□□□ -0.48
CCT3-201ENST00000295688 MLANAQ16655 118 aa12.03□□□□□ -0.48
CCT3-201ENST00000295688 FAM216BQ8N7L0 139 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms